RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 LOC730098B7Z3J9 87 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 G3V318 75 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 LINC01556Q5JQF7 62 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 FAM103A1Q9BTL3 118 aaKnown RBP0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 SPTBN2O15020 2390 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 SPAG11BQ08648 103 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 WFDC9Q8NEX5 89 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 EPG5Q9HCE0 2579 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 STAB1Q9NY15 2570 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 F8P00451 2351 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 KRTAP2-3P0C7H8 128 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 KRTAP2-4Q9BYR9 128 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 KRTAP2-1Q9BYU5 128 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 GCN1Q92616 2671 aaKnown RBP0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 JMJD1CQ15652 2540 aa0.37□□□□□ -2.35
CTDSPL2-202ENST00000558373 D6R8Y8 96 aa0.37□□□□□ -2.35
CTDSPL2-202ENST00000558373 H0Y9P7 68 aa0.37□□□□□ -2.35
CTDSPL2-202ENST00000558373 ARHGAP5-AS1Q96IT6 56 aa0.37□□□□□ -2.35
CTDSPL2-202ENST00000558373 ITPR1Q14643 2758 aa0.37□□□□□ -2.35
CTDSPL2-202ENST00000558373 SPTBP11277 2137 aa0.37□□□□□ -2.35
CTDSPL2-202ENST00000558373 DEFB123Q8N688 67 aa0.37□□□□□ -2.35
CTDSPL2-202ENST00000558373 SPTA1P02549 2419 aa0.37□□□□□ -2.35
CTDSPL2-202ENST00000558373 TEP1Q99973 2627 aaKnown RBP0.37□□□□□ -2.35
CTDSPL2-202ENST00000558373 AHCTF1Q8WYP5 2266 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 M0R3E3 92 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 MT1HL1P0DM35 61 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 LINC00158P58513 81 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 LINC00308Q8TCZ7 52 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 FASNP49327 2511 aaKnown RBP0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 COL6A6A6NMZ7 2263 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 APC2O95996 2303 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 A0A0D9SG42 100 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 ENHOQ6UWT2 76 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 SPG11Q96JI7 2443 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 NDUFA3O95167 84 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 DEFB135Q30KP9 77 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 GAFA1Q96PS6 74 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 DOPEY2Q9Y3R5 2298 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 HIVEP1P15822 2718 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 TEX15Q9BXT5 2789 aa0.36□□□□□ -2.35
CTDSPL2-202ENST00000558373 A0A1B0GU69 56 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 PRH1P02810 166 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 SPRR1AP35321 89 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 URB1O60287 2271 aaKnown RBP0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 M0R2T5 61 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 IGF2RP11717 2491 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 SETD2Q9BYW2 2564 aaPredicted RBP0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 SMR3AQ99954 134 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 CACNA1BQ00975 2339 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 H1FX-AS1Q4G0G2 97 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 ABCA12Q86UK0 2595 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 USF3Q68DE3 2245 aa0.35□□□□□ -2.35
CTDSPL2-202ENST00000558373 LRRK2Q5S007 2527 aa0.34□□□□□ -2.35
CTDSPL2-202ENST00000558373 COL6A5A8TX70 2615 aa0.34□□□□□ -2.35
CTDSPL2-202ENST00000558373 ROS1P08922 2347 aa0.34□□□□□ -2.35
CTDSPL2-202ENST00000558373 SPRR2BP35325 72 aa0.34□□□□□ -2.35
CTDSPL2-202ENST00000558373 SPRR2GQ9BYE4 73 aa0.34□□□□□ -2.35
CTDSPL2-202ENST00000558373 AKAP6Q13023 2319 aa0.34□□□□□ -2.35
CTDSPL2-202ENST00000558373 RPS27P42677 84 aaKnown RBP0.34□□□□□ -2.36
CTDSPL2-202ENST00000558373 GOLGA4Q13439 2230 aaKnown RBP0.34□□□□□ -2.36
CTDSPL2-202ENST00000558373 FAM186AA6NE01 2351 aa0.34□□□□□ -2.36
CTDSPL2-202ENST00000558373 NBEAL2Q6ZNJ1 2754 aa0.34□□□□□ -2.36
CTDSPL2-202ENST00000558373 C2CD3Q4AC94 2353 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 MGAM2Q2M2H8 2515 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 C6orf48Q9UBA6 75 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 FLNCQ14315 2725 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 BDP1A6H8Y1 2624 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 KRTAP20-1Q3LI63 56 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 LEAP2Q969E1 77 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 F5P12259 2224 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 CCDC168Q8NDH2 2452 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 PDE4DIPQ5VU43 2346 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 ASXL3Q9C0F0 2248 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 SPRR2AP35326 72 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 PRLHP81277 87 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 CHD8Q9HCK8 2581 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 WT1-ASQ06250 92 aa0.33□□□□□ -2.36
CTDSPL2-202ENST00000558373 ABCA1O95477 2261 aa0.32□□□□□ -2.36
CTDSPL2-202ENST00000558373 PKDREJQ9NTG1 2253 aa0.32□□□□□ -2.36
CTDSPL2-202ENST00000558373 TLN1Q9Y490 2541 aaKnown RBP0.32□□□□□ -2.36
CTDSPL2-202ENST00000558373 MYO18BQ8IUG5 2567 aa0.32□□□□□ -2.36
CTDSPL2-202ENST00000558373 RPL39LQ96EH5 51 aaKnown RBP0.32□□□□□ -2.36
CTDSPL2-202ENST00000558373 S4R3F8 94 aa0.32□□□□□ -2.36
CTDSPL2-202ENST00000558373 DEFB130BP0DP73 79 aa0.32□□□□□ -2.36
CTDSPL2-202ENST00000558373 DEFB130AP0DP74 79 aa0.32□□□□□ -2.36
CTDSPL2-202ENST00000558373 RPL39P62891 51 aaKnown RBP0.32□□□□□ -2.36
CTDSPL2-202ENST00000558373 USP9XQ93008 2570 aaPredicted RBP0.31□□□□□ -2.36
CTDSPL2-202ENST00000558373 CENPEQ02224 2701 aa0.31□□□□□ -2.36
CTDSPL2-202ENST00000558373 CFAP46Q8IYW2 2715 aa0.31□□□□□ -2.36
CTDSPL2-202ENST00000558373 CEP290O15078 2479 aa0.31□□□□□ -2.36
CTDSPL2-202ENST00000558373 CNTRLQ7Z7A1 2325 aa0.31□□□□□ -2.36
CTDSPL2-202ENST00000558373 PTPRQQ9UMZ3 2332 aa0.31□□□□□ -2.36
CTDSPL2-202ENST00000558373 GVINP1Q7Z2Y8 2422 aa0.3□□□□□ -2.36
CTDSPL2-202ENST00000558373 TENM3Q9P273 2699 aa0.3□□□□□ -2.36
CTDSPL2-202ENST00000558373 SPTBN4Q9H254 2564 aa0.3□□□□□ -2.36
CTDSPL2-202ENST00000558373 HAMPP81172 84 aa0.3□□□□□ -2.36
CTDSPL2-202ENST00000558373 SPTBN1Q01082 2364 aaKnown RBP0.3□□□□□ -2.36
CTDSPL2-202ENST00000558373 TNCP24821 2201 aa0.3□□□□□ -2.36
CTDSPL2-202ENST00000558373 KRTAP19-5Q3LI72 72 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms