RNA–Protein interactions for RNA: ENST00000558271.5

LRRC49-209, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-209ENST00000558271 JMJD1CQ15652 2540 aa0.42□□□□□ -2.34
LRRC49-209ENST00000558271 FAT3Q8TDW7 4589 aa0.42□□□□□ -2.34
LRRC49-209ENST00000558271 MUC3AQ02505 3323 aa0.42□□□□□ -2.34
LRRC49-209ENST00000558271 DNAH5Q8TE73 4624 aa0.42□□□□□ -2.34
LRRC49-209ENST00000558271 SPTA1P02549 2419 aa0.42□□□□□ -2.34
LRRC49-209ENST00000558271 NIPBLQ6KC79 2804 aaeCLIP0.42□□□□□ -2.34
LRRC49-209ENST00000558271 ITPR3Q14573 2671 aa0.41□□□□□ -2.34
LRRC49-209ENST00000558271 SETXQ7Z333 2677 aaKnown RBP0.41□□□□□ -2.34
LRRC49-209ENST00000558271 COL6A5A8TX70 2615 aa0.41□□□□□ -2.34
LRRC49-209ENST00000558271 PTPN13Q12923 2485 aa0.41□□□□□ -2.34
LRRC49-209ENST00000558271 USP9XQ93008 2570 aaPredicted RBP0.41□□□□□ -2.34
LRRC49-209ENST00000558271 MXRA5Q9NR99 2828 aa0.41□□□□□ -2.34
LRRC49-209ENST00000558271 ATMQ13315 3056 aa0.41□□□□□ -2.34
LRRC49-209ENST00000558271 EP300Q09472 2414 aaPredicted RBP0.41□□□□□ -2.34
LRRC49-209ENST00000558271 GVINP1Q7Z2Y8 2422 aa0.41□□□□□ -2.34
LRRC49-209ENST00000558271 NCOR2Q9Y618 2525 aa0.41□□□□□ -2.34
LRRC49-209ENST00000558271 UTP20O75691 2785 aaKnown RBP0.41□□□□□ -2.34
LRRC49-209ENST00000558271 HRNRQ86YZ3 2850 aaPredicted RBP0.41□□□□□ -2.34
LRRC49-209ENST00000558271 MEGF8Q7Z7M0 2845 aa0.41□□□□□ -2.34
LRRC49-209ENST00000558271 PKD1L1Q8TDX9 2849 aa0.41□□□□□ -2.34
LRRC49-209ENST00000558271 TGP01266 2768 aa0.4□□□□□ -2.34
LRRC49-209ENST00000558271 NBEAL2Q6ZNJ1 2754 aa0.4□□□□□ -2.34
LRRC49-209ENST00000558271 C2CD3Q4AC94 2353 aa0.4□□□□□ -2.34
LRRC49-209ENST00000558271 ZNF292O60281 2723 aa0.4□□□□□ -2.35
LRRC49-209ENST00000558271 ADGRG4Q8IZF6 3080 aa0.4□□□□□ -2.35
LRRC49-209ENST00000558271 HSPG2P98160 4391 aa0.4□□□□□ -2.35
LRRC49-209ENST00000558271 PRKDCP78527 4128 aaKnown RBP0.4□□□□□ -2.35
LRRC49-209ENST00000558271 TTC28Q96AY4 2481 aa0.4□□□□□ -2.35
LRRC49-209ENST00000558271 USP9YO00507 2555 aaPredicted RBP0.4□□□□□ -2.35
LRRC49-209ENST00000558271 GCN1Q92616 2671 aaKnown RBP0.4□□□□□ -2.35
LRRC49-209ENST00000558271 APC2O95996 2303 aa0.4□□□□□ -2.35
LRRC49-209ENST00000558271 H3BNG1 76 aa0.4□□□□□ -2.35
LRRC49-209ENST00000558271 ABCA2Q9BZC7 2435 aa0.4□□□□□ -2.35
LRRC49-209ENST00000558271 FLGP20930 4061 aaPredicted RBP0.4□□□□□ -2.35
LRRC49-209ENST00000558271 DYNC1H1Q14204 4646 aaKnown RBP0.4□□□□□ -2.35
LRRC49-209ENST00000558271 ABCA12Q86UK0 2595 aa0.4□□□□□ -2.35
LRRC49-209ENST00000558271 CFAP46Q8IYW2 2715 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 APCP25054 2843 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 F8P00451 2351 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 CEP290O15078 2479 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 PKHD1P08F94 4074 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 NBEAL1Q6ZS30 2694 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 TNP1P09430 55 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 SONP18583 2426 aaKnown RBP0.39□□□□□ -2.35
LRRC49-209ENST00000558271 SPG11Q96JI7 2443 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 ANKHD1Q8IWZ3 2542 aaKnown RBP0.39□□□□□ -2.35
LRRC49-209ENST00000558271 FAT1Q14517 4588 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 FAM186AA6NE01 2351 aa0.39□□□□□ -2.35
LRRC49-209ENST00000558271 FAM208BQ5VWN6 2430 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 DMBT1Q9UGM3 2413 aaPredicted RBP0.38□□□□□ -2.35
LRRC49-209ENST00000558271 HIVEP1P15822 2718 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 ZANQ9Y493 2812 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 FAT2Q9NYQ8 4349 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 RIF1Q5UIP0 2472 aaKnown RBP0.38□□□□□ -2.35
LRRC49-209ENST00000558271 PKD1L2Q7Z442 2459 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 NBASA2RRP1 2371 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 CACNA1HO95180 2353 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 TNXBP22105 4242 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 Q5VSD8 79 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 SMR3AQ99954 134 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 LRP1Q07954 4544 aaKnown RBP0.38□□□□□ -2.35
LRRC49-209ENST00000558271 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 TENM4Q6N022 2769 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 NAV2Q8IVL1 2488 aa0.38□□□□□ -2.35
LRRC49-209ENST00000558271 PKD1P98161 4303 aa0.37□□□□□ -2.35
LRRC49-209ENST00000558271 CENPEQ02224 2701 aa0.37□□□□□ -2.35
LRRC49-209ENST00000558271 PIEZO1Q92508 2521 aa0.37□□□□□ -2.35
LRRC49-209ENST00000558271 EYSQ5T1H1 3165 aa0.37□□□□□ -2.35
LRRC49-209ENST00000558271 LPAP08519 4548 aa0.37□□□□□ -2.35
LRRC49-209ENST00000558271 SPTAN1Q13813 2472 aaKnown RBP0.37□□□□□ -2.35
LRRC49-209ENST00000558271 SMR3BP02814 79 aaPredicted RBP0.37□□□□□ -2.35
LRRC49-209ENST00000558271 STARD9Q9P2P6 4700 aa0.37□□□□□ -2.35
LRRC49-209ENST00000558271 UNC79Q9P2D8 2635 aa0.37□□□□□ -2.35
LRRC49-209ENST00000558271 HIVEP3Q5T1R4 2406 aa0.37□□□□□ -2.35
LRRC49-209ENST00000558271 LRP1BQ9NZR2 4599 aa0.37□□□□□ -2.35
LRRC49-209ENST00000558271 ITPR2Q14571 2701 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 USP24Q9UPU5 2620 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 TLN1Q9Y490 2541 aaKnown RBP0.36□□□□□ -2.35
LRRC49-209ENST00000558271 STAB2Q8WWQ8 2551 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 EPG5Q9HCE0 2579 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 FLNCQ14315 2725 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 BDP1A6H8Y1 2624 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 ATRQ13535 2644 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 MTORP42345 2549 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 ANKRD11Q6UB99 2663 aaPredicted RBP0.36□□□□□ -2.35
LRRC49-209ENST00000558271 CHD8Q9HCK8 2581 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 HERC1Q15751 4861 aa0.36□□□□□ -2.35
LRRC49-209ENST00000558271 TEP1Q99973 2627 aaKnown RBP0.35□□□□□ -2.35
LRRC49-209ENST00000558271 CACNA1AO00555 2505 aa0.35□□□□□ -2.35
LRRC49-209ENST00000558271 M0R2T5 61 aa0.35□□□□□ -2.35
LRRC49-209ENST00000558271 TLN2Q9Y4G6 2542 aa0.35□□□□□ -2.35
LRRC49-209ENST00000558271 POLQO75417 2590 aa0.35□□□□□ -2.35
LRRC49-209ENST00000558271 SETD2Q9BYW2 2564 aaPredicted RBP0.35□□□□□ -2.35
LRRC49-209ENST00000558271 HYDINQ4G0P3 5121 aa0.35□□□□□ -2.35
LRRC49-209ENST00000558271 LRRK2Q5S007 2527 aa0.34□□□□□ -2.35
LRRC49-209ENST00000558271 NSD1Q96L73 2696 aaPredicted RBP0.34□□□□□ -2.35
LRRC49-209ENST00000558271 MUC17Q685J3 4493 aa0.34□□□□□ -2.36
LRRC49-209ENST00000558271 ACANP16112 2415 aa0.34□□□□□ -2.36
LRRC49-209ENST00000558271 FLNAP21333 2647 aaKnown RBP0.34□□□□□ -2.36
LRRC49-209ENST00000558271 DOPEY1Q5JWR5 2465 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms