RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
USP3-207ENST00000558218 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
USP3-207ENST00000558218 ETDBQ3ZM63 59 aa4.7□□□□□ -1.66
USP3-207ENST00000558218 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
USP3-207ENST00000558218 C1orf64Q8NEQ6 169 aa4.69□□□□□ -1.66
USP3-207ENST00000558218 ACYP1P07311 99 aa4.68□□□□□ -1.66
USP3-207ENST00000558218 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
USP3-207ENST00000558218 CSAG1Q6PB30 78 aa4.68□□□□□ -1.66
USP3-207ENST00000558218 PCP4P48539 62 aa4.66□□□□□ -1.66
USP3-207ENST00000558218 S4R3F8 94 aa4.66□□□□□ -1.66
USP3-207ENST00000558218 C5orf47Q569G3 176 aa4.65□□□□□ -1.67
USP3-207ENST00000558218 KRTAP5-11Q6L8G4 156 aa4.65□□□□□ -1.67
USP3-207ENST00000558218 KRTAP6-3Q3LI67 103 aa4.64□□□□□ -1.67
USP3-207ENST00000558218 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
USP3-207ENST00000558218 FAM240AA0A1B0GVK7 77 aa4.63□□□□□ -1.67
USP3-207ENST00000558218 PCP4L1A6NKN8 68 aa4.63□□□□□ -1.67
USP3-207ENST00000558218 ATP5EP2Q5VTU8 51 aa4.62□□□□□ -1.67
USP3-207ENST00000558218 LCA10Q71F78 164 aa4.62□□□□□ -1.67
USP3-207ENST00000558218 FAM236AA0A1B0GUQ0 79 aa4.61□□□□□ -1.67
USP3-207ENST00000558218 FAM236BA0A1B0GV22 79 aa4.61□□□□□ -1.67
USP3-207ENST00000558218 LOC101927531A0A1B0GV80 90 aa4.61□□□□□ -1.67
USP3-207ENST00000558218 TRAV22A0A0B4J277 110 aa4.6□□□□□ -1.67
USP3-207ENST00000558218 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
USP3-207ENST00000558218 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
USP3-207ENST00000558218 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
USP3-207ENST00000558218 NEBP20929 6669 aa4.59□□□□□ -1.68
USP3-207ENST00000558218 UQCRQO14949 82 aa4.58□□□□□ -1.68
USP3-207ENST00000558218 ATOX1O00244 68 aa4.57□□□□□ -1.68
USP3-207ENST00000558218 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
USP3-207ENST00000558218 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
USP3-207ENST00000558218 HIST1H4AP62805 103 aaKnown RBP4.55□□□□□ -1.68
USP3-207ENST00000558218 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
USP3-207ENST00000558218 Q5VV11 94 aa4.54□□□□□ -1.68
USP3-207ENST00000558218 LINC00643Q86TS7 51 aa4.54□□□□□ -1.68
USP3-207ENST00000558218 MT1BP07438 61 aa4.52□□□□□ -1.69
USP3-207ENST00000558218 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
USP3-207ENST00000558218 A8MUN3 132 aa4.51□□□□□ -1.69
USP3-207ENST00000558218 H0Y9P7 68 aa4.51□□□□□ -1.69
USP3-207ENST00000558218 A6NN06 94 aa4.5□□□□□ -1.69
USP3-207ENST00000558218 H0YAA0 97 aa4.5□□□□□ -1.69
USP3-207ENST00000558218 NDUFC1O43677 76 aa4.5□□□□□ -1.69
USP3-207ENST00000558218 A0A087WVE0 104 aa4.48□□□□□ -1.69
USP3-207ENST00000558218 MP68P56378 58 aa4.46□□□□□ -1.7
USP3-207ENST00000558218 KRTAP10-5P60370 271 aa4.45□□□□□ -1.7
USP3-207ENST00000558218 LINC00208Q96KT6 92 aa4.44□□□□□ -1.7
USP3-207ENST00000558218 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
USP3-207ENST00000558218 MT3P25713 68 aa4.43□□□□□ -1.7
USP3-207ENST00000558218 H3BPC8 53 aa4.42□□□□□ -1.7
USP3-207ENST00000558218 J3QR89 54 aa4.42□□□□□ -1.7
USP3-207ENST00000558218 A0A1B0GV90 55 aa4.38□□□□□ -1.71
USP3-207ENST00000558218 ADM2Q7Z4H4 148 aa4.37□□□□□ -1.71
USP3-207ENST00000558218 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
USP3-207ENST00000558218 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
USP3-207ENST00000558218 SCGB1A1P11684 91 aa4.35□□□□□ -1.71
USP3-207ENST00000558218 C20orf197Q8N268 126 aa4.34□□□□□ -1.71
USP3-207ENST00000558218 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
USP3-207ENST00000558218 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
USP3-207ENST00000558218 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
USP3-207ENST00000558218 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
USP3-207ENST00000558218 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
USP3-207ENST00000558218 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
USP3-207ENST00000558218 R4GN34 69 aa4.29□□□□□ -1.72
USP3-207ENST00000558218 TRAV7A0A075B6U4 112 aa4.28□□□□□ -1.72
USP3-207ENST00000558218 SMIM20Q8N5G0 67 aa4.27□□□□□ -1.73
USP3-207ENST00000558218 P0C880 135 aa4.25□□□□□ -1.73
USP3-207ENST00000558218 ACYP2P14621 99 aa4.25□□□□□ -1.73
USP3-207ENST00000558218 M0QZ58 72 aa4.23□□□□□ -1.73
USP3-207ENST00000558218 MT1XP80297 61 aa4.23□□□□□ -1.73
USP3-207ENST00000558218 SPTSSBQ8NFR3 76 aa4.22□□□□□ -1.73
USP3-207ENST00000558218 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
USP3-207ENST00000558218 KMT2DO14686 5537 aa4.21□□□□□ -1.74
USP3-207ENST00000558218 K7ERU9 68 aa4.2□□□□□ -1.74
USP3-207ENST00000558218 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
USP3-207ENST00000558218 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
USP3-207ENST00000558218 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
USP3-207ENST00000558218 MT-ATP8P03928 68 aa4.18□□□□□ -1.74
USP3-207ENST00000558218 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
USP3-207ENST00000558218 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
USP3-207ENST00000558218 LINC01554Q52M75 96 aa4.14□□□□□ -1.75
USP3-207ENST00000558218 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
USP3-207ENST00000558218 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
USP3-207ENST00000558218 KRTAP8-1Q8IUC2 63 aa4.13□□□□□ -1.75
USP3-207ENST00000558218 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
USP3-207ENST00000558218 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
USP3-207ENST00000558218 SNURFQ9Y675 71 aa4.08□□□□□ -1.76
USP3-207ENST00000558218 SPRR2EP22531 72 aa4.07□□□□□ -1.76
USP3-207ENST00000558218 SPRR2BP35325 72 aa4.07□□□□□ -1.76
USP3-207ENST00000558218 SPRR2AP35326 72 aa4.07□□□□□ -1.76
USP3-207ENST00000558218 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
USP3-207ENST00000558218 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
USP3-207ENST00000558218 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
USP3-207ENST00000558218 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
USP3-207ENST00000558218 SPRR2DP22532 72 aa3.95□□□□□ -1.78
USP3-207ENST00000558218 SEC61GP60059 68 aa3.95□□□□□ -1.78
USP3-207ENST00000558218 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
USP3-207ENST00000558218 KRTAP13-4Q3LI77 160 aa3.94□□□□□ -1.78
USP3-207ENST00000558218 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
USP3-207ENST00000558218 COA5Q86WW8 74 aa3.94□□□□□ -1.78
USP3-207ENST00000558218 SERP1Q9Y6X1 66 aa3.94□□□□□ -1.78
USP3-207ENST00000558218 COX7CP15954 63 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms