RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 ATOX1O00244 68 aa7.51□□□□□ -1.21
NEDD4-212ENST00000557845 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
NEDD4-212ENST00000557845 MT1BP07438 61 aa7.49□□□□□ -1.21
NEDD4-212ENST00000557845 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
NEDD4-212ENST00000557845 Q5VV11 94 aa7.48□□□□□ -1.21
NEDD4-212ENST00000557845 A0A1B0GV90 55 aa7.46□□□□□ -1.22
NEDD4-212ENST00000557845 A6NN06 94 aa7.41□□□□□ -1.22
NEDD4-212ENST00000557845 NDUFC1O43677 76 aa7.41□□□□□ -1.22
NEDD4-212ENST00000557845 LINC00208Q96KT6 92 aa7.41□□□□□ -1.22
NEDD4-212ENST00000557845 IMUPQ9GZP8 106 aa7.41□□□□□ -1.22
NEDD4-212ENST00000557845 CRIPTQ9P021 101 aa7.4□□□□□ -1.22
NEDD4-212ENST00000557845 KRTAP6-3Q3LI67 103 aa7.39□□□□□ -1.23
NEDD4-212ENST00000557845 OCR1Q9BZK8 76 aa7.39□□□□□ -1.23
NEDD4-212ENST00000557845 A8MUN3 132 aa7.38□□□□□ -1.23
NEDD4-212ENST00000557845 MP68P56378 58 aa7.36□□□□□ -1.23
NEDD4-212ENST00000557845 H0YAA0 97 aa7.35□□□□□ -1.23
NEDD4-212ENST00000557845 KRTAP10-5P60370 271 aa7.32□□□□□ -1.24
NEDD4-212ENST00000557845 J3QR89 54 aa7.31□□□□□ -1.24
NEDD4-212ENST00000557845 ADM2Q7Z4H4 148 aa7.27□□□□□ -1.25
NEDD4-212ENST00000557845 H3BPC8 53 aa7.25□□□□□ -1.25
NEDD4-212ENST00000557845 SCGB1A1P11684 91 aa7.22□□□□□ -1.25
NEDD4-212ENST00000557845 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
NEDD4-212ENST00000557845 MUC12Q9UKN1 5478 aa7.1□□□□□ -1.27
NEDD4-212ENST00000557845 P0C880 135 aa7.1□□□□□ -1.27
NEDD4-212ENST00000557845 R4GN34 69 aa7.08□□□□□ -1.28
NEDD4-212ENST00000557845 C20orf197Q8N268 126 aa7.07□□□□□ -1.28
NEDD4-212ENST00000557845 MT-ATP8P03928 68 aa7.06□□□□□ -1.28
NEDD4-212ENST00000557845 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
NEDD4-212ENST00000557845 KRTAP5-9P26371 169 aa7.05□□□□□ -1.28
NEDD4-212ENST00000557845 TRAV7A0A075B6U4 112 aa7.03□□□□□ -1.28
NEDD4-212ENST00000557845 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
NEDD4-212ENST00000557845 M0QZ58 72 aa7.02□□□□□ -1.29
NEDD4-212ENST00000557845 ACYP2P14621 99 aa7.02□□□□□ -1.29
NEDD4-212ENST00000557845 MT1XP80297 61 aa7.02□□□□□ -1.29
NEDD4-212ENST00000557845 SMIM20Q8N5G0 67 aa7.02□□□□□ -1.29
NEDD4-212ENST00000557845 K7ERU9 68 aa7.01□□□□□ -1.29
NEDD4-212ENST00000557845 NEBP20929 6669 aa7.01□□□□□ -1.29
NEDD4-212ENST00000557845 KMT2DO14686 5537 aa6.93□□□□□ -1.3
NEDD4-212ENST00000557845 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
NEDD4-212ENST00000557845 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
NEDD4-212ENST00000557845 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
NEDD4-212ENST00000557845 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
NEDD4-212ENST00000557845 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
NEDD4-212ENST00000557845 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
NEDD4-212ENST00000557845 KRTAP20-1Q3LI63 56 aa6.83□□□□□ -1.32
NEDD4-212ENST00000557845 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
NEDD4-212ENST00000557845 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
NEDD4-212ENST00000557845 SPANXA2-OT1Q8N9U9 137 aa6.79□□□□□ -1.32
NEDD4-212ENST00000557845 SERP2Q8N6R1 65 aa6.77□□□□□ -1.33
NEDD4-212ENST00000557845 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
NEDD4-212ENST00000557845 KRTAP4-8Q9BYQ9 185 aa6.74□□□□□ -1.33
NEDD4-212ENST00000557845 SPRR2EP22531 72 aa6.73□□□□□ -1.33
NEDD4-212ENST00000557845 SPRR2BP35325 72 aa6.73□□□□□ -1.33
NEDD4-212ENST00000557845 SPRR2AP35326 72 aa6.73□□□□□ -1.33
NEDD4-212ENST00000557845 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
NEDD4-212ENST00000557845 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
NEDD4-212ENST00000557845 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
NEDD4-212ENST00000557845 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
NEDD4-212ENST00000557845 LCE1AQ5T7P2 110 aa6.65□□□□□ -1.34
NEDD4-212ENST00000557845 KRTAP13-4Q3LI77 160 aa6.63□□□□□ -1.35
NEDD4-212ENST00000557845 COA5Q86WW8 74 aa6.6□□□□□ -1.35
NEDD4-212ENST00000557845 COX7CP15954 63 aa6.55□□□□□ -1.36
NEDD4-212ENST00000557845 CAMK2N1Q7Z7J9 78 aa6.51□□□□□ -1.37
NEDD4-212ENST00000557845 SPRR2DP22532 72 aa6.5□□□□□ -1.37
NEDD4-212ENST00000557845 SEC61GP60059 68 aa6.5□□□□□ -1.37
NEDD4-212ENST00000557845 SERP1Q9Y6X1 66 aa6.5□□□□□ -1.37
NEDD4-212ENST00000557845 KRTAP2-2Q9BYT5 123 aa6.47□□□□□ -1.37
NEDD4-212ENST00000557845 KRTAP2-1Q9BYU5 128 aa6.47□□□□□ -1.37
NEDD4-212ENST00000557845 H7BZZ5 65 aa6.46□□□□□ -1.38
NEDD4-212ENST00000557845 CYSTM1Q9H1C7 97 aa6.46□□□□□ -1.38
NEDD4-212ENST00000557845 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
NEDD4-212ENST00000557845 A0A0D9SG42 100 aa6.41□□□□□ -1.38
NEDD4-212ENST00000557845 A0A1B0GU33 70 aa6.4□□□□□ -1.38
NEDD4-212ENST00000557845 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
NEDD4-212ENST00000557845 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
NEDD4-212ENST00000557845 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
NEDD4-212ENST00000557845 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
NEDD4-212ENST00000557845 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
NEDD4-212ENST00000557845 ANAPC13Q9BS18 74 aa6.29□□□□□ -1.4
NEDD4-212ENST00000557845 A0A1B0GU69 56 aa6.28□□□□□ -1.4
NEDD4-212ENST00000557845 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
NEDD4-212ENST00000557845 SMIM26A0A096LP01 95 aa6.21□□□□□ -1.42
NEDD4-212ENST00000557845 MT1EP04732 61 aa6.21□□□□□ -1.42
NEDD4-212ENST00000557845 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
NEDD4-212ENST00000557845 CCDC179H3BU77 68 aa6.18□□□□□ -1.42
NEDD4-212ENST00000557845 A8MU10 97 aa6.17□□□□□ -1.42
NEDD4-212ENST00000557845 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
NEDD4-212ENST00000557845 KRTAP19-5Q3LI72 72 aa6.11□□□□□ -1.43
NEDD4-212ENST00000557845 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.43
NEDD4-212ENST00000557845 ATP5EP56381 51 aaPredicted RBP6.09□□□□□ -1.43
NEDD4-212ENST00000557845 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
NEDD4-212ENST00000557845 MT1GP13640 62 aa6.04□□□□□ -1.44
NEDD4-212ENST00000557845 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
NEDD4-212ENST00000557845 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
NEDD4-212ENST00000557845 TNP1P09430 55 aa6.01□□□□□ -1.45
NEDD4-212ENST00000557845 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
NEDD4-212ENST00000557845 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
NEDD4-212ENST00000557845 MT1LQ93083 61 aa5.94□□□□□ -1.46
NEDD4-212ENST00000557845 TMEM258P61165 79 aa5.93□□□□□ -1.46
NEDD4-212ENST00000557845 MT1MQ8N339 61 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms