RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 Q5VV11 94 aa7.44□□□□□ -1.22
VSX1-207ENST00000557285 KLKP1Q107X0 134 aa7.43□□□□□ -1.22
VSX1-207ENST00000557285 MT1BP07438 61 aa7.41□□□□□ -1.22
VSX1-207ENST00000557285 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
VSX1-207ENST00000557285 LINC00208Q96KT6 92 aa7.4□□□□□ -1.22
VSX1-207ENST00000557285 NDUFC1O43677 76 aa7.37□□□□□ -1.23
VSX1-207ENST00000557285 A6NN06 94 aa7.36□□□□□ -1.23
VSX1-207ENST00000557285 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
VSX1-207ENST00000557285 MP68P56378 58 aa7.34□□□□□ -1.23
VSX1-207ENST00000557285 OCR1Q9BZK8 76 aa7.33□□□□□ -1.24
VSX1-207ENST00000557285 IMUPQ9GZP8 106 aa7.33□□□□□ -1.24
VSX1-207ENST00000557285 A8MUN3 132 aa7.3□□□□□ -1.24
VSX1-207ENST00000557285 J3QR89 54 aa7.28□□□□□ -1.24
VSX1-207ENST00000557285 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
VSX1-207ENST00000557285 ADM2Q7Z4H4 148 aa7.27□□□□□ -1.25
VSX1-207ENST00000557285 KRTAP6-3Q3LI67 103 aa7.26□□□□□ -1.25
VSX1-207ENST00000557285 SCGB1A1P11684 91 aa7.24□□□□□ -1.25
VSX1-207ENST00000557285 H0YAA0 97 aa7.23□□□□□ -1.25
VSX1-207ENST00000557285 KRTAP10-5P60370 271 aa7.23□□□□□ -1.25
VSX1-207ENST00000557285 H3BPC8 53 aa7.17□□□□□ -1.26
VSX1-207ENST00000557285 DMAC1Q96GE9 116 aa7.12□□□□□ -1.27
VSX1-207ENST00000557285 MT-ATP8P03928 68 aa7.08□□□□□ -1.28
VSX1-207ENST00000557285 P0C880 135 aa7.08□□□□□ -1.28
VSX1-207ENST00000557285 MUC12Q9UKN1 5478 aa7.07□□□□□ -1.28
VSX1-207ENST00000557285 R4GN34 69 aa7.06□□□□□ -1.28
VSX1-207ENST00000557285 NEBP20929 6669 aa7.05□□□□□ -1.28
VSX1-207ENST00000557285 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
VSX1-207ENST00000557285 M0QZ58 72 aa7.02□□□□□ -1.29
VSX1-207ENST00000557285 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
VSX1-207ENST00000557285 K7ERU9 68 aa7□□□□□ -1.29
VSX1-207ENST00000557285 TRAV7A0A075B6U4 112 aa6.99□□□□□ -1.29
VSX1-207ENST00000557285 LINC01554Q52M75 96 aa6.97□□□□□ -1.29
VSX1-207ENST00000557285 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
VSX1-207ENST00000557285 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
VSX1-207ENST00000557285 ACYP2P14621 99 aa6.96□□□□□ -1.3
VSX1-207ENST00000557285 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
VSX1-207ENST00000557285 MT1XP80297 61 aa6.95□□□□□ -1.3
VSX1-207ENST00000557285 KMT2DO14686 5537 aa6.94□□□□□ -1.3
VSX1-207ENST00000557285 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
VSX1-207ENST00000557285 SNURFQ9Y675 71 aa6.91□□□□□ -1.3
VSX1-207ENST00000557285 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
VSX1-207ENST00000557285 SPTSSBQ8NFR3 76 aa6.88□□□□□ -1.31
VSX1-207ENST00000557285 MDN1Q9NU22 5596 aa6.88□□□□□ -1.31
VSX1-207ENST00000557285 KRTAP20-1Q3LI63 56 aa6.83□□□□□ -1.32
VSX1-207ENST00000557285 SPRR2FQ96RM1 72 aa6.8□□□□□ -1.32
VSX1-207ENST00000557285 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
VSX1-207ENST00000557285 SERP2Q8N6R1 65 aa6.74□□□□□ -1.33
VSX1-207ENST00000557285 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
VSX1-207ENST00000557285 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
VSX1-207ENST00000557285 SPRR2EP22531 72 aa6.71□□□□□ -1.34
VSX1-207ENST00000557285 SPRR2BP35325 72 aa6.71□□□□□ -1.34
VSX1-207ENST00000557285 SPRR2AP35326 72 aa6.71□□□□□ -1.34
VSX1-207ENST00000557285 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
VSX1-207ENST00000557285 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
VSX1-207ENST00000557285 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
VSX1-207ENST00000557285 KRTAP13-4Q3LI77 160 aa6.61□□□□□ -1.35
VSX1-207ENST00000557285 COA5Q86WW8 74 aa6.61□□□□□ -1.35
VSX1-207ENST00000557285 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
VSX1-207ENST00000557285 KRTAP2-3P0C7H8 128 aa6.56□□□□□ -1.36
VSX1-207ENST00000557285 LCE1AQ5T7P2 110 aa6.56□□□□□ -1.36
VSX1-207ENST00000557285 KRTAP2-4Q9BYR9 128 aa6.56□□□□□ -1.36
VSX1-207ENST00000557285 COX7CP15954 63 aa6.53□□□□□ -1.36
VSX1-207ENST00000557285 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
VSX1-207ENST00000557285 SEC61GP60059 68 aa6.5□□□□□ -1.37
VSX1-207ENST00000557285 SERP1Q9Y6X1 66 aa6.49□□□□□ -1.37
VSX1-207ENST00000557285 A0A0D9SG42 100 aa6.48□□□□□ -1.37
VSX1-207ENST00000557285 SPRR2DP22532 72 aa6.48□□□□□ -1.37
VSX1-207ENST00000557285 CYSTM1Q9H1C7 97 aa6.48□□□□□ -1.37
VSX1-207ENST00000557285 H7BZZ5 65 aa6.44□□□□□ -1.38
VSX1-207ENST00000557285 SPATA8Q6RVD6 105 aa6.43□□□□□ -1.38
VSX1-207ENST00000557285 A0A1B0GU33 70 aa6.38□□□□□ -1.39
VSX1-207ENST00000557285 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
VSX1-207ENST00000557285 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
VSX1-207ENST00000557285 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
VSX1-207ENST00000557285 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
VSX1-207ENST00000557285 A0A1B0GU69 56 aa6.28□□□□□ -1.4
VSX1-207ENST00000557285 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
VSX1-207ENST00000557285 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
VSX1-207ENST00000557285 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
VSX1-207ENST00000557285 A8MU10 97 aa6.2□□□□□ -1.42
VSX1-207ENST00000557285 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
VSX1-207ENST00000557285 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
VSX1-207ENST00000557285 MT1EP04732 61 aa6.16□□□□□ -1.42
VSX1-207ENST00000557285 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
VSX1-207ENST00000557285 GPR98Q8WXG9 6306 aa6.11□□□□□ -1.43
VSX1-207ENST00000557285 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
VSX1-207ENST00000557285 KRTAP19-3Q7Z4W3 81 aa6.1□□□□□ -1.43
VSX1-207ENST00000557285 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.43
VSX1-207ENST00000557285 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
VSX1-207ENST00000557285 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
VSX1-207ENST00000557285 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
VSX1-207ENST00000557285 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
VSX1-207ENST00000557285 TNP1P09430 55 aa5.97□□□□□ -1.45
VSX1-207ENST00000557285 LCE3AQ5TA76 89 aa5.96□□□□□ -1.46
VSX1-207ENST00000557285 MT1GP13640 62 aa5.93□□□□□ -1.46
VSX1-207ENST00000557285 TMEM258P61165 79 aa5.93□□□□□ -1.46
VSX1-207ENST00000557285 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
VSX1-207ENST00000557285 MT1LQ93083 61 aa5.89□□□□□ -1.47
VSX1-207ENST00000557285 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
VSX1-207ENST00000557285 MT1MQ8N339 61 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms