RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 DMBT1Q9UGM3 2413 aaPredicted RBP5.94□□□□□ -1.46
SRP54-213ENST00000556994 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
SRP54-213ENST00000556994 A0A1B0GVY2 172 aa5.92□□□□□ -1.46
SRP54-213ENST00000556994 HSPG2P98160 4391 aa5.92□□□□□ -1.46
SRP54-213ENST00000556994 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
SRP54-213ENST00000556994 K7ERS5 55 aa5.9□□□□□ -1.46
SRP54-213ENST00000556994 A0A0D9SG42 100 aa5.87□□□□□ -1.47
SRP54-213ENST00000556994 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
SRP54-213ENST00000556994 KRTAP13-4Q3LI77 160 aa5.87□□□□□ -1.47
SRP54-213ENST00000556994 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
SRP54-213ENST00000556994 TNXBP22105 4242 aa5.86□□□□□ -1.47
SRP54-213ENST00000556994 H3BS24 57 aa5.85□□□□□ -1.47
SRP54-213ENST00000556994 KRTAP10-8P60410 259 aa5.84□□□□□ -1.47
SRP54-213ENST00000556994 ROMO1P60602 79 aa5.83□□□□□ -1.48
SRP54-213ENST00000556994 RPL37P61927 97 aaKnown RBP5.82□□□□□ -1.48
SRP54-213ENST00000556994 EPPK1P58107 5090 aaKnown RBP5.79□□□□□ -1.48
SRP54-213ENST00000556994 S4R3F8 94 aa5.79□□□□□ -1.48
SRP54-213ENST00000556994 P0C880 135 aa5.78□□□□□ -1.48
SRP54-213ENST00000556994 XP32Q5T750 250 aa5.77□□□□□ -1.49
SRP54-213ENST00000556994 LPAP08519 4548 aa5.74□□□□□ -1.49
SRP54-213ENST00000556994 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
SRP54-213ENST00000556994 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
SRP54-213ENST00000556994 Q5VSD8 79 aa5.71□□□□□ -1.49
SRP54-213ENST00000556994 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
SRP54-213ENST00000556994 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
SRP54-213ENST00000556994 LCE2BO14633 110 aa5.65□□□□□ -1.51
SRP54-213ENST00000556994 SPINT4Q6UDR6 99 aa5.65□□□□□ -1.51
SRP54-213ENST00000556994 LRP2P98164 4655 aa5.63□□□□□ -1.51
SRP54-213ENST00000556994 KIAA1109Q2LD37 5005 aa5.63□□□□□ -1.51
SRP54-213ENST00000556994 RYR1P21817 5038 aa5.62□□□□□ -1.51
SRP54-213ENST00000556994 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
SRP54-213ENST00000556994 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.51
SRP54-213ENST00000556994 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
SRP54-213ENST00000556994 M0QZ58 72 aa5.49□□□□□ -1.53
SRP54-213ENST00000556994 HERC2O95714 4834 aa5.49□□□□□ -1.53
SRP54-213ENST00000556994 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
SRP54-213ENST00000556994 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
SRP54-213ENST00000556994 ABCA13Q86UQ4 5058 aa5.46□□□□□ -1.54
SRP54-213ENST00000556994 NDUFAF8A1L188 74 aa5.45□□□□□ -1.54
SRP54-213ENST00000556994 R4GN34 69 aa5.4□□□□□ -1.54
SRP54-213ENST00000556994 LCE2AQ5TA79 106 aaPredicted RBP5.39□□□□□ -1.55
SRP54-213ENST00000556994 LORP23490 312 aaPredicted RBP5.37□□□□□ -1.55
SRP54-213ENST00000556994 KRTAP4-5Q9BYR2 181 aa5.37□□□□□ -1.55
SRP54-213ENST00000556994 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
SRP54-213ENST00000556994 PCLOQ9Y6V0 5065 aa5.32□□□□□ -1.56
SRP54-213ENST00000556994 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
SRP54-213ENST00000556994 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
SRP54-213ENST00000556994 HERC1Q15751 4861 aa5.21□□□□□ -1.57
SRP54-213ENST00000556994 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
SRP54-213ENST00000556994 MUC2Q02817 5179 aa5.19□□□□□ -1.58
SRP54-213ENST00000556994 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.59
SRP54-213ENST00000556994 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
SRP54-213ENST00000556994 A0A0A0MQY5 61 aa5.06□□□□□ -1.6
SRP54-213ENST00000556994 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
SRP54-213ENST00000556994 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
SRP54-213ENST00000556994 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
SRP54-213ENST00000556994 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
SRP54-213ENST00000556994 TNP1P09430 55 aa4.94□□□□□ -1.62
SRP54-213ENST00000556994 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
SRP54-213ENST00000556994 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
SRP54-213ENST00000556994 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
SRP54-213ENST00000556994 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
SRP54-213ENST00000556994 KRTAP19-1Q8IUB9 90 aa4.77□□□□□ -1.65
SRP54-213ENST00000556994 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
SRP54-213ENST00000556994 SPRR2GQ9BYE4 73 aa4.75□□□□□ -1.65
SRP54-213ENST00000556994 M0R2T5 61 aa4.74□□□□□ -1.65
SRP54-213ENST00000556994 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
SRP54-213ENST00000556994 MT1HP80294 61 aa4.66□□□□□ -1.66
SRP54-213ENST00000556994 KRTAP10-10P60014 251 aa4.65□□□□□ -1.66
SRP54-213ENST00000556994 MT1FP04733 61 aa4.64□□□□□ -1.67
SRP54-213ENST00000556994 MT2AP02795 61 aa4.61□□□□□ -1.67
SRP54-213ENST00000556994 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
SRP54-213ENST00000556994 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
SRP54-213ENST00000556994 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
SRP54-213ENST00000556994 MT1XP80297 61 aa4.5□□□□□ -1.69
SRP54-213ENST00000556994 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
SRP54-213ENST00000556994 MT1BP07438 61 aa4.5□□□□□ -1.69
SRP54-213ENST00000556994 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
SRP54-213ENST00000556994 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
SRP54-213ENST00000556994 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
SRP54-213ENST00000556994 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
SRP54-213ENST00000556994 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
SRP54-213ENST00000556994 KMT2DO14686 5537 aa4.3□□□□□ -1.72
SRP54-213ENST00000556994 USH2AO75445 5202 aa4.28□□□□□ -1.73
SRP54-213ENST00000556994 INE1O15225 51 aa4.26□□□□□ -1.73
SRP54-213ENST00000556994 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
SRP54-213ENST00000556994 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
SRP54-213ENST00000556994 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
SRP54-213ENST00000556994 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
SRP54-213ENST00000556994 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
SRP54-213ENST00000556994 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
SRP54-213ENST00000556994 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
SRP54-213ENST00000556994 FSIP2Q5CZC0 6907 aa4.04□□□□□ -1.76
SRP54-213ENST00000556994 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
SRP54-213ENST00000556994 KRTAP4-6Q9BYQ5 205 aa4.01□□□□□ -1.77
SRP54-213ENST00000556994 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
SRP54-213ENST00000556994 KRTAP9-2Q9BYQ4 174 aa3.96□□□□□ -1.78
SRP54-213ENST00000556994 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
SRP54-213ENST00000556994 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
SRP54-213ENST00000556994 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms