RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 PRR15Q8IV56 129 aa2.31□□□□□ -2.04
ATXN3-242ENST00000556644 ST20-AS1Q8NBB2 130 aa2.31□□□□□ -2.04
ATXN3-242ENST00000556644 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
ATXN3-242ENST00000556644 A0A087WSZ3 146 aa2.3□□□□□ -2.04
ATXN3-242ENST00000556644 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
ATXN3-242ENST00000556644 MT1FP04733 61 aa2.3□□□□□ -2.04
ATXN3-242ENST00000556644 LINC00472Q9H8W2 130 aa2.3□□□□□ -2.04
ATXN3-242ENST00000556644 ZNF706Q9Y5V0 76 aaPredicted RBP2.3□□□□□ -2.04
ATXN3-242ENST00000556644 MOBPQ13875 183 aa2.29□□□□□ -2.04
ATXN3-242ENST00000556644 CASC2Q6XLA1 102 aa2.29□□□□□ -2.04
ATXN3-242ENST00000556644 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
ATXN3-242ENST00000556644 LIMD2Q9BT23 127 aa2.29□□□□□ -2.04
ATXN3-242ENST00000556644 LINC00483Q53H64 154 aa2.28□□□□□ -2.04
ATXN3-242ENST00000556644 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
ATXN3-242ENST00000556644 H0Y9P7 68 aa2.27□□□□□ -2.05
ATXN3-242ENST00000556644 PRLHP81277 87 aa2.27□□□□□ -2.05
ATXN3-242ENST00000556644 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
ATXN3-242ENST00000556644 MMP24-AS1A0A0U1RRL7 71 aa2.26□□□□□ -2.05
ATXN3-242ENST00000556644 KRTAP10-10P60014 251 aa2.26□□□□□ -2.05
ATXN3-242ENST00000556644 CD164Q04900 197 aa2.26□□□□□ -2.05
ATXN3-242ENST00000556644 FAM229BQ4G0N7 80 aa2.26□□□□□ -2.05
ATXN3-242ENST00000556644 WFDC13Q8IUB5 93 aa2.26□□□□□ -2.05
ATXN3-242ENST00000556644 MPLKIPQ8TAP9 179 aa2.26□□□□□ -2.05
ATXN3-242ENST00000556644 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
ATXN3-242ENST00000556644 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
ATXN3-242ENST00000556644 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
ATXN3-242ENST00000556644 KRTAP2-1Q9BYU5 128 aa2.25□□□□□ -2.05
ATXN3-242ENST00000556644 A0A1B0GVX0 72 aa2.24□□□□□ -2.05
ATXN3-242ENST00000556644 C8orf87E5RJ46 101 aa2.24□□□□□ -2.05
ATXN3-242ENST00000556644 SSBP3-AS1Q7Z2R9 100 aa2.24□□□□□ -2.05
ATXN3-242ENST00000556644 Q8N9P0 234 aaPredicted RBP2.24□□□□□ -2.05
ATXN3-242ENST00000556644 C8orf17Q9NRJ1 99 aa2.24□□□□□ -2.05
ATXN3-242ENST00000556644 Q75L30 129 aa2.23□□□□□ -2.05
ATXN3-242ENST00000556644 Q96NJ1 140 aa2.23□□□□□ -2.05
ATXN3-242ENST00000556644 MRPL34Q9BQ48 92 aaKnown RBP2.23□□□□□ -2.05
ATXN3-242ENST00000556644 C9orf92A6NGG3 77 aa2.22□□□□□ -2.05
ATXN3-242ENST00000556644 DEFB116Q30KQ4 102 aa2.22□□□□□ -2.05
ATXN3-242ENST00000556644 SPAG11AQ6PDA7 123 aa2.22□□□□□ -2.05
ATXN3-242ENST00000556644 ATP11AUNQ6ZP68 121 aa2.22□□□□□ -2.05
ATXN3-242ENST00000556644 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
ATXN3-242ENST00000556644 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
ATXN3-242ENST00000556644 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
ATXN3-242ENST00000556644 Q5VV11 94 aa2.21□□□□□ -2.06
ATXN3-242ENST00000556644 COA5Q86WW8 74 aa2.21□□□□□ -2.06
ATXN3-242ENST00000556644 IGLV9-49A0A0B4J1Y8 123 aa2.2□□□□□ -2.06
ATXN3-242ENST00000556644 A0A0G2JQZ4 141 aa2.2□□□□□ -2.06
ATXN3-242ENST00000556644 A8MUN3 132 aa2.2□□□□□ -2.06
ATXN3-242ENST00000556644 IGHV6-1A0A0B4J1U7 121 aa2.19□□□□□ -2.06
ATXN3-242ENST00000556644 CHKB-CPT1BH3BT56 60 aa2.19□□□□□ -2.06
ATXN3-242ENST00000556644 PSPHP1O15172 72 aa2.19□□□□□ -2.06
ATXN3-242ENST00000556644 NDUFS5O43920 106 aa2.19□□□□□ -2.06
ATXN3-242ENST00000556644 ACYP2P14621 99 aa2.19□□□□□ -2.06
ATXN3-242ENST00000556644 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
ATXN3-242ENST00000556644 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
ATXN3-242ENST00000556644 SPRR2EP22531 72 aa2.18□□□□□ -2.06
ATXN3-242ENST00000556644 SPRR2BP35325 72 aa2.18□□□□□ -2.06
ATXN3-242ENST00000556644 SPRR2AP35326 72 aa2.18□□□□□ -2.06
ATXN3-242ENST00000556644 PRR15LQ9BU68 103 aa2.18□□□□□ -2.06
ATXN3-242ENST00000556644 A6NED7 52 aa2.17□□□□□ -2.06
ATXN3-242ENST00000556644 SPINK1P00995 79 aa2.16□□□□□ -2.06
ATXN3-242ENST00000556644 HRES1P13985 223 aa2.16□□□□□ -2.06
ATXN3-242ENST00000556644 LINC00313P59037 77 aa2.16□□□□□ -2.06
ATXN3-242ENST00000556644 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
ATXN3-242ENST00000556644 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
ATXN3-242ENST00000556644 SEC61GP60059 68 aa2.15□□□□□ -2.07
ATXN3-242ENST00000556644 KRTAP10-7P60409 375 aaPredicted RBP2.15□□□□□ -2.07
ATXN3-242ENST00000556644 RPS29P62273 56 aaKnown RBP2.15□□□□□ -2.07
ATXN3-242ENST00000556644 IGKV2-30P06310 120 aa2.14□□□□□ -2.07
ATXN3-242ENST00000556644 LCA10Q71F78 164 aa2.14□□□□□ -2.07
ATXN3-242ENST00000556644 A6NN06 94 aa2.13□□□□□ -2.07
ATXN3-242ENST00000556644 RPL37P61927 97 aaKnown RBP2.13□□□□□ -2.07
ATXN3-242ENST00000556644 Q5W150 140 aa2.12□□□□□ -2.07
ATXN3-242ENST00000556644 NOTCH2NLQ7Z3S9 236 aa2.12□□□□□ -2.07
ATXN3-242ENST00000556644 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
ATXN3-242ENST00000556644 SPRR2DP22532 72 aa2.11□□□□□ -2.07
ATXN3-242ENST00000556644 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
ATXN3-242ENST00000556644 C7orf65Q6ZTY9 151 aa2.11□□□□□ -2.07
ATXN3-242ENST00000556644 C20orf166-AS1Q96NR2 134 aa2.11□□□□□ -2.07
ATXN3-242ENST00000556644 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
ATXN3-242ENST00000556644 IGKV2D-30A0A075B6S6 120 aa2.1□□□□□ -2.07
ATXN3-242ENST00000556644 A0A1B0GU69 56 aa2.1□□□□□ -2.07
ATXN3-242ENST00000556644 KRTAP16-1A8MUX0 517 aa2.1□□□□□ -2.07
ATXN3-242ENST00000556644 UQCR11O14957 56 aa2.1□□□□□ -2.07
ATXN3-242ENST00000556644 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
ATXN3-242ENST00000556644 SPINK7P58062 85 aa2.09□□□□□ -2.07
ATXN3-242ENST00000556644 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
ATXN3-242ENST00000556644 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
ATXN3-242ENST00000556644 LCE1AQ5T7P2 110 aa2.07□□□□□ -2.08
ATXN3-242ENST00000556644 RBM12B-AS1Q9P1G2 102 aa2.07□□□□□ -2.08
ATXN3-242ENST00000556644 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
ATXN3-242ENST00000556644 A8MU10 97 aa2.06□□□□□ -2.08
ATXN3-242ENST00000556644 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
ATXN3-242ENST00000556644 A8MUU9 505 aa2.04□□□□□ -2.08
ATXN3-242ENST00000556644 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
ATXN3-242ENST00000556644 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.09
ATXN3-242ENST00000556644 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
ATXN3-242ENST00000556644 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
ATXN3-242ENST00000556644 K7ERS5 55 aa2□□□□□ -2.09
ATXN3-242ENST00000556644 KRTAP10-5P60370 271 aa2□□□□□ -2.09
ATXN3-242ENST00000556644 A0A1B0GU33 70 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms