RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 C9orf92A6NGG3 77 aa4.66□□□□□ -1.66
MARK3-210ENST00000556463 RPL37P61927 97 aaKnown RBP4.65□□□□□ -1.66
MARK3-210ENST00000556463 SACSQ9NZJ4 4579 aa4.64□□□□□ -1.67
MARK3-210ENST00000556463 FAT2Q9NYQ8 4349 aa4.64□□□□□ -1.67
MARK3-210ENST00000556463 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
MARK3-210ENST00000556463 PKHD1L1Q86WI1 4243 aa4.6□□□□□ -1.67
MARK3-210ENST00000556463 RPS29P62273 56 aaKnown RBP4.6□□□□□ -1.67
MARK3-210ENST00000556463 KRTAP10-2P60368 255 aa4.6□□□□□ -1.67
MARK3-210ENST00000556463 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
MARK3-210ENST00000556463 KRTAP10-1P60331 282 aa4.55□□□□□ -1.68
MARK3-210ENST00000556463 PKHD1P08F94 4074 aa4.52□□□□□ -1.69
MARK3-210ENST00000556463 HYDINQ4G0P3 5121 aa4.51□□□□□ -1.69
MARK3-210ENST00000556463 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
MARK3-210ENST00000556463 S4R3F8 94 aa4.45□□□□□ -1.7
MARK3-210ENST00000556463 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
MARK3-210ENST00000556463 KRTAP13-4Q3LI77 160 aa4.42□□□□□ -1.7
MARK3-210ENST00000556463 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
MARK3-210ENST00000556463 KRTAP10-4P60372 401 aaPredicted RBP4.39□□□□□ -1.71
MARK3-210ENST00000556463 TNXBP22105 4242 aa4.38□□□□□ -1.71
MARK3-210ENST00000556463 KRTAP10-8P60410 259 aa4.38□□□□□ -1.71
MARK3-210ENST00000556463 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
MARK3-210ENST00000556463 LRP1Q07954 4544 aaKnown RBP4.35□□□□□ -1.71
MARK3-210ENST00000556463 DYNC1H1Q14204 4646 aaKnown RBP4.34□□□□□ -1.71
MARK3-210ENST00000556463 HSPG2P98160 4391 aa4.33□□□□□ -1.72
MARK3-210ENST00000556463 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
MARK3-210ENST00000556463 DNHD1Q96M86 4753 aa4.33□□□□□ -1.72
MARK3-210ENST00000556463 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
MARK3-210ENST00000556463 SMR3BP02814 79 aaPredicted RBP4.32□□□□□ -1.72
MARK3-210ENST00000556463 FAT1Q14517 4588 aa4.3□□□□□ -1.72
MARK3-210ENST00000556463 A0A1B0GVY2 172 aa4.24□□□□□ -1.73
MARK3-210ENST00000556463 XP32Q5T750 250 aa4.23□□□□□ -1.73
MARK3-210ENST00000556463 M0QZ58 72 aa4.23□□□□□ -1.73
MARK3-210ENST00000556463 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
MARK3-210ENST00000556463 R4GN34 69 aa4.19□□□□□ -1.74
MARK3-210ENST00000556463 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
MARK3-210ENST00000556463 MYCBP2O75592 4640 aa4.16□□□□□ -1.74
MARK3-210ENST00000556463 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
MARK3-210ENST00000556463 LPAP08519 4548 aa4.1□□□□□ -1.75
MARK3-210ENST00000556463 RYR2Q92736 4967 aa4.09□□□□□ -1.76
MARK3-210ENST00000556463 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
MARK3-210ENST00000556463 KMT2CQ8NEZ4 4911 aaKnown RBP4.03□□□□□ -1.76
MARK3-210ENST00000556463 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
MARK3-210ENST00000556463 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
MARK3-210ENST00000556463 KRTAP9-7A8MTY7 169 aa3.99□□□□□ -1.77
MARK3-210ENST00000556463 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
MARK3-210ENST00000556463 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
MARK3-210ENST00000556463 MT1HL1P0DM35 61 aa3.99□□□□□ -1.77
MARK3-210ENST00000556463 LRP2P98164 4655 aa3.98□□□□□ -1.77
MARK3-210ENST00000556463 KRTAP17-1Q9BYP8 105 aa3.98□□□□□ -1.77
MARK3-210ENST00000556463 RYR1P21817 5038 aa3.96□□□□□ -1.78
MARK3-210ENST00000556463 Q5VSD8 79 aa3.93□□□□□ -1.78
MARK3-210ENST00000556463 MUC17Q685J3 4493 aa3.92□□□□□ -1.78
MARK3-210ENST00000556463 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
MARK3-210ENST00000556463 KRTAP19-2Q3LHN2 52 aa3.85□□□□□ -1.79
MARK3-210ENST00000556463 TNP1P09430 55 aa3.84□□□□□ -1.79
MARK3-210ENST00000556463 RYR3Q15413 4870 aa3.84□□□□□ -1.79
MARK3-210ENST00000556463 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
MARK3-210ENST00000556463 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
MARK3-210ENST00000556463 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
MARK3-210ENST00000556463 KRTAP4-1Q9BYQ7 146 aa3.77□□□□□ -1.81
MARK3-210ENST00000556463 KRTAP19-1Q8IUB9 90 aa3.73□□□□□ -1.81
MARK3-210ENST00000556463 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
MARK3-210ENST00000556463 INE1O15225 51 aa3.71□□□□□ -1.82
MARK3-210ENST00000556463 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
MARK3-210ENST00000556463 HERC1Q15751 4861 aa3.68□□□□□ -1.82
MARK3-210ENST00000556463 EPPK1P58107 5090 aaKnown RBP3.67□□□□□ -1.82
MARK3-210ENST00000556463 KRTAP4-5Q9BYR2 181 aa3.6□□□□□ -1.83
MARK3-210ENST00000556463 LCE1FQ5T754 118 aa3.59□□□□□ -1.84
MARK3-210ENST00000556463 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
MARK3-210ENST00000556463 BIRC6Q9NR09 4857 aa3.56□□□□□ -1.84
MARK3-210ENST00000556463 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
MARK3-210ENST00000556463 HERC2O95714 4834 aa3.54□□□□□ -1.84
MARK3-210ENST00000556463 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
MARK3-210ENST00000556463 MUC2Q02817 5179 aa3.53□□□□□ -1.85
MARK3-210ENST00000556463 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
MARK3-210ENST00000556463 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
MARK3-210ENST00000556463 M0R2T5 61 aa3.47□□□□□ -1.85
MARK3-210ENST00000556463 KRTAP8-1Q8IUC2 63 aa3.44□□□□□ -1.86
MARK3-210ENST00000556463 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
MARK3-210ENST00000556463 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
MARK3-210ENST00000556463 KRTAP10-12P60413 245 aa3.34□□□□□ -1.87
MARK3-210ENST00000556463 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.87
MARK3-210ENST00000556463 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
MARK3-210ENST00000556463 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
MARK3-210ENST00000556463 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
MARK3-210ENST00000556463 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
MARK3-210ENST00000556463 MT1FP04733 61 aa3.31□□□□□ -1.88
MARK3-210ENST00000556463 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
MARK3-210ENST00000556463 MT1XP80297 61 aa3.31□□□□□ -1.88
MARK3-210ENST00000556463 MT2AP02795 61 aa3.3□□□□□ -1.88
MARK3-210ENST00000556463 KRTAP9-8Q9BYQ0 159 aa3.3□□□□□ -1.88
MARK3-210ENST00000556463 MT1HP80294 61 aa3.3□□□□□ -1.88
MARK3-210ENST00000556463 MT1BP07438 61 aa3.28□□□□□ -1.88
MARK3-210ENST00000556463 MT3P25713 68 aa3.28□□□□□ -1.88
MARK3-210ENST00000556463 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
MARK3-210ENST00000556463 KRTAP4-8Q9BYQ9 185 aa3.25□□□□□ -1.89
MARK3-210ENST00000556463 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
MARK3-210ENST00000556463 KRTAP10-10P60014 251 aa3.24□□□□□ -1.89
MARK3-210ENST00000556463 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
MARK3-210ENST00000556463 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms