RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 DNAH10Q8IVF4 4471 aa7.03□□□□□ -1.28
LRP1-211ENST00000556356 VPS13DQ5THJ4 4388 aa7.01□□□□□ -1.29
LRP1-211ENST00000556356 KRTAP3-3Q9BYR6 98 aa6.94□□□□□ -1.3
LRP1-211ENST00000556356 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
LRP1-211ENST00000556356 DNAH17Q9UFH2 4485 aa6.91□□□□□ -1.3
LRP1-211ENST00000556356 ANK2Q01484 3957 aa6.9□□□□□ -1.3
LRP1-211ENST00000556356 STARD9Q9P2P6 4700 aa6.87□□□□□ -1.31
LRP1-211ENST00000556356 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
LRP1-211ENST00000556356 PRKDCP78527 4128 aaKnown RBP6.83□□□□□ -1.32
LRP1-211ENST00000556356 LRP1BQ9NZR2 4599 aa6.82□□□□□ -1.32
LRP1-211ENST00000556356 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
LRP1-211ENST00000556356 FAT2Q9NYQ8 4349 aa6.73□□□□□ -1.33
LRP1-211ENST00000556356 DYNC2H1Q8NCM8 4307 aaKnown RBP6.73□□□□□ -1.33
LRP1-211ENST00000556356 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
LRP1-211ENST00000556356 RYR1P21817 5038 aa6.72□□□□□ -1.33
LRP1-211ENST00000556356 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
LRP1-211ENST00000556356 FAT1Q14517 4588 aa6.69□□□□□ -1.34
LRP1-211ENST00000556356 DNAH3Q8TD57 4116 aa6.67□□□□□ -1.34
LRP1-211ENST00000556356 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
LRP1-211ENST00000556356 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
LRP1-211ENST00000556356 MT1HP80294 61 aa6.63□□□□□ -1.35
LRP1-211ENST00000556356 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
LRP1-211ENST00000556356 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
LRP1-211ENST00000556356 DNAH6Q9C0G6 4158 aa6.55□□□□□ -1.36
LRP1-211ENST00000556356 KRTAP17-1Q9BYP8 105 aa6.52□□□□□ -1.37
LRP1-211ENST00000556356 CMYA5Q8N3K9 4069 aa6.51□□□□□ -1.37
LRP1-211ENST00000556356 RYR3Q15413 4870 aa6.5□□□□□ -1.37
LRP1-211ENST00000556356 KIAA1109Q2LD37 5005 aa6.5□□□□□ -1.37
LRP1-211ENST00000556356 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
LRP1-211ENST00000556356 MT2AP02795 61 aa6.47□□□□□ -1.37
LRP1-211ENST00000556356 DNAH8Q96JB1 4490 aa6.45□□□□□ -1.38
LRP1-211ENST00000556356 RYR2Q92736 4967 aa6.44□□□□□ -1.38
LRP1-211ENST00000556356 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
LRP1-211ENST00000556356 BIRC6Q9NR09 4857 aa6.39□□□□□ -1.39
LRP1-211ENST00000556356 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
LRP1-211ENST00000556356 INE1O15225 51 aa6.37□□□□□ -1.39
LRP1-211ENST00000556356 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
LRP1-211ENST00000556356 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
LRP1-211ENST00000556356 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
LRP1-211ENST00000556356 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
LRP1-211ENST00000556356 MT1FP04733 61 aa6.33□□□□□ -1.4
LRP1-211ENST00000556356 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
LRP1-211ENST00000556356 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
LRP1-211ENST00000556356 LYSTQ99698 3801 aa6.28□□□□□ -1.4
LRP1-211ENST00000556356 DNAH7Q8WXX0 4024 aa6.27□□□□□ -1.41
LRP1-211ENST00000556356 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
LRP1-211ENST00000556356 HERC2O95714 4834 aa6.23□□□□□ -1.41
LRP1-211ENST00000556356 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.43
LRP1-211ENST00000556356 HYDINQ4G0P3 5121 aa6.13□□□□□ -1.43
LRP1-211ENST00000556356 HSPG2P98160 4391 aa6.12□□□□□ -1.43
LRP1-211ENST00000556356 HECTD4Q9Y4D8 3996 aa6.11□□□□□ -1.43
LRP1-211ENST00000556356 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
LRP1-211ENST00000556356 HERC1Q15751 4861 aa6.03□□□□□ -1.44
LRP1-211ENST00000556356 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
LRP1-211ENST00000556356 KRTAP19-8Q3LI54 63 aa5.97□□□□□ -1.45
LRP1-211ENST00000556356 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
LRP1-211ENST00000556356 PKHD1L1Q86WI1 4243 aa5.93□□□□□ -1.46
LRP1-211ENST00000556356 FRAS1Q86XX4 4008 aa5.93□□□□□ -1.46
LRP1-211ENST00000556356 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
LRP1-211ENST00000556356 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
LRP1-211ENST00000556356 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
LRP1-211ENST00000556356 PKHD1P08F94 4074 aa5.9□□□□□ -1.46
LRP1-211ENST00000556356 KMT2CQ8NEZ4 4911 aaKnown RBP5.9□□□□□ -1.47
LRP1-211ENST00000556356 PKD1P98161 4303 aa5.89□□□□□ -1.47
LRP1-211ENST00000556356 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
LRP1-211ENST00000556356 KRTAP10-5P60370 271 aa5.83□□□□□ -1.48
LRP1-211ENST00000556356 LRP2P98164 4655 aa5.82□□□□□ -1.48
LRP1-211ENST00000556356 MT1BP07438 61 aa5.78□□□□□ -1.48
LRP1-211ENST00000556356 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
LRP1-211ENST00000556356 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
LRP1-211ENST00000556356 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
LRP1-211ENST00000556356 MT1XP80297 61 aa5.72□□□□□ -1.49
LRP1-211ENST00000556356 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
LRP1-211ENST00000556356 ABCA13Q86UQ4 5058 aa5.7□□□□□ -1.5
LRP1-211ENST00000556356 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
LRP1-211ENST00000556356 SPRR2EP22531 72 aa5.67□□□□□ -1.5
LRP1-211ENST00000556356 SPRR2BP35325 72 aa5.67□□□□□ -1.5
LRP1-211ENST00000556356 SPRR2AP35326 72 aa5.67□□□□□ -1.5
LRP1-211ENST00000556356 LPAP08519 4548 aa5.65□□□□□ -1.51
LRP1-211ENST00000556356 TNXBP22105 4242 aa5.64□□□□□ -1.51
LRP1-211ENST00000556356 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
LRP1-211ENST00000556356 LCE2BO14633 110 aa5.53□□□□□ -1.52
LRP1-211ENST00000556356 SPRR2DP22532 72 aa5.5□□□□□ -1.53
LRP1-211ENST00000556356 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
LRP1-211ENST00000556356 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
LRP1-211ENST00000556356 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
LRP1-211ENST00000556356 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
LRP1-211ENST00000556356 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
LRP1-211ENST00000556356 FLGP20930 4061 aaPredicted RBP5.42□□□□□ -1.54
LRP1-211ENST00000556356 MT1GP13640 62 aa5.39□□□□□ -1.55
LRP1-211ENST00000556356 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
LRP1-211ENST00000556356 KRTAP19-6Q3LI70 58 aa5.36□□□□□ -1.55
LRP1-211ENST00000556356 RNF213Q63HN8 5207 aa5.35□□□□□ -1.55
LRP1-211ENST00000556356 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
LRP1-211ENST00000556356 UBR4Q5T4S7 5183 aa5.27□□□□□ -1.57
LRP1-211ENST00000556356 HMCN2Q8NDA2 5059 aa5.24□□□□□ -1.57
LRP1-211ENST00000556356 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
LRP1-211ENST00000556356 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
LRP1-211ENST00000556356 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
LRP1-211ENST00000556356 MT1EP04732 61 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms