RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 VPS25Q9BRG1 176 aa3.29□□□□□ -1.88
ATXN3-236ENST00000556220 IGKV4-1P06312 121 aa3.28□□□□□ -1.88
ATXN3-236ENST00000556220 HRES1P13985 223 aa3.28□□□□□ -1.88
ATXN3-236ENST00000556220 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
ATXN3-236ENST00000556220 HIST1H4AP62805 103 aaKnown RBP3.27□□□□□ -1.89
ATXN3-236ENST00000556220 DSCR8Q96T75 97 aa3.27□□□□□ -1.89
ATXN3-236ENST00000556220 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
ATXN3-236ENST00000556220 A8MWP4 228 aa3.26□□□□□ -1.89
ATXN3-236ENST00000556220 H3BQ85 93 aa3.26□□□□□ -1.89
ATXN3-236ENST00000556220 K7EQZ3 153 aa3.25□□□□□ -1.89
ATXN3-236ENST00000556220 LINC00643Q86TS7 51 aa3.25□□□□□ -1.89
ATXN3-236ENST00000556220 A6NN06 94 aa3.24□□□□□ -1.89
ATXN3-236ENST00000556220 ACYP1P07311 99 aa3.24□□□□□ -1.89
ATXN3-236ENST00000556220 MMP24-AS1A0A0U1RRL7 71 aa3.23□□□□□ -1.89
ATXN3-236ENST00000556220 PDE6GP18545 87 aa3.23□□□□□ -1.89
ATXN3-236ENST00000556220 CYSTM1Q9H1C7 97 aa3.23□□□□□ -1.89
ATXN3-236ENST00000556220 F8WEM9 126 aa3.22□□□□□ -1.89
ATXN3-236ENST00000556220 SNCGO76070 127 aa3.21□□□□□ -1.9
ATXN3-236ENST00000556220 J3QR89 54 aa3.2□□□□□ -1.9
ATXN3-236ENST00000556220 CXCL6P80162 114 aa3.2□□□□□ -1.9
ATXN3-236ENST00000556220 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
ATXN3-236ENST00000556220 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
ATXN3-236ENST00000556220 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
ATXN3-236ENST00000556220 A0A1B0GW54 56 aa3.19□□□□□ -1.9
ATXN3-236ENST00000556220 NREPQ16612 68 aa3.19□□□□□ -1.9
ATXN3-236ENST00000556220 PRR15Q8IV56 129 aa3.19□□□□□ -1.9
ATXN3-236ENST00000556220 FAM236AA0A1B0GUQ0 79 aa3.18□□□□□ -1.9
ATXN3-236ENST00000556220 FAM236BA0A1B0GV22 79 aa3.18□□□□□ -1.9
ATXN3-236ENST00000556220 UBL5Q9BZL1 73 aa3.18□□□□□ -1.9
ATXN3-236ENST00000556220 A0A1B0GVX0 72 aa3.17□□□□□ -1.9
ATXN3-236ENST00000556220 Q5W150 140 aa3.17□□□□□ -1.9
ATXN3-236ENST00000556220 ATP5EP2Q5VTU8 51 aa3.16□□□□□ -1.9
ATXN3-236ENST00000556220 C8orf17Q9NRJ1 99 aa3.16□□□□□ -1.9
ATXN3-236ENST00000556220 LINC00313P59037 77 aa3.15□□□□□ -1.91
ATXN3-236ENST00000556220 KRTAP12-2P59991 146 aa3.15□□□□□ -1.91
ATXN3-236ENST00000556220 WFDC13Q8IUB5 93 aa3.15□□□□□ -1.91
ATXN3-236ENST00000556220 IMUPQ9GZP8 106 aa3.15□□□□□ -1.91
ATXN3-236ENST00000556220 SS18L2Q9UHA2 77 aa3.15□□□□□ -1.91
ATXN3-236ENST00000556220 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
ATXN3-236ENST00000556220 IGHV6-1A0A0B4J1U7 121 aa3.13□□□□□ -1.91
ATXN3-236ENST00000556220 MT1BP07438 61 aa3.13□□□□□ -1.91
ATXN3-236ENST00000556220 SPRR2EP22531 72 aa3.13□□□□□ -1.91
ATXN3-236ENST00000556220 SPRR2BP35325 72 aa3.13□□□□□ -1.91
ATXN3-236ENST00000556220 SPRR2AP35326 72 aa3.13□□□□□ -1.91
ATXN3-236ENST00000556220 HCG22E2RYF7 251 aa3.12□□□□□ -1.91
ATXN3-236ENST00000556220 SCGB1A1P11684 91 aa3.12□□□□□ -1.91
ATXN3-236ENST00000556220 ZCCHC13Q8WW36 166 aaKnown RBP3.12□□□□□ -1.91
ATXN3-236ENST00000556220 SPINK7P58062 85 aa3.11□□□□□ -1.91
ATXN3-236ENST00000556220 CASC2Q6XLA1 102 aa3.1□□□□□ -1.91
ATXN3-236ENST00000556220 J3KT08 172 aa3.09□□□□□ -1.91
ATXN3-236ENST00000556220 Q5VV11 94 aa3.09□□□□□ -1.91
ATXN3-236ENST00000556220 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.91
ATXN3-236ENST00000556220 hDV103S1A0JD37 113 aa3.08□□□□□ -1.92
ATXN3-236ENST00000556220 A8MU10 97 aa3.08□□□□□ -1.92
ATXN3-236ENST00000556220 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
ATXN3-236ENST00000556220 MRPL34Q9BQ48 92 aaKnown RBP3.08□□□□□ -1.92
ATXN3-236ENST00000556220 KRTAP19-8Q3LI54 63 aa3.07□□□□□ -1.92
ATXN3-236ENST00000556220 TRAV7A0A075B6U4 112 aa3.06□□□□□ -1.92
ATXN3-236ENST00000556220 COX7CP15954 63 aa3.06□□□□□ -1.92
ATXN3-236ENST00000556220 KLKP1Q107X0 134 aa3.06□□□□□ -1.92
ATXN3-236ENST00000556220 SERP2Q8N6R1 65 aa3.06□□□□□ -1.92
ATXN3-236ENST00000556220 C8orf87E5RJ46 101 aa3.05□□□□□ -1.92
ATXN3-236ENST00000556220 SNURFQ9Y675 71 aa3.05□□□□□ -1.92
ATXN3-236ENST00000556220 ATOX1O00244 68 aa3.04□□□□□ -1.92
ATXN3-236ENST00000556220 H1FX-AS1Q4G0G2 97 aa3.04□□□□□ -1.92
ATXN3-236ENST00000556220 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
ATXN3-236ENST00000556220 ANAPC13Q9BS18 74 aa3.04□□□□□ -1.92
ATXN3-236ENST00000556220 V9GYY9 64 aa3.04□□□□□ -1.92
ATXN3-236ENST00000556220 H7BZZ5 65 aa3.03□□□□□ -1.92
ATXN3-236ENST00000556220 SPRR2GQ9BYE4 73 aa3.03□□□□□ -1.92
ATXN3-236ENST00000556220 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
ATXN3-236ENST00000556220 SPRR2DP22532 72 aa3.02□□□□□ -1.93
ATXN3-236ENST00000556220 C20orf197Q8N268 126 aa3.02□□□□□ -1.93
ATXN3-236ENST00000556220 H0Y9P7 68 aa3.01□□□□□ -1.93
ATXN3-236ENST00000556220 NDUFB1O75438 58 aa3.01□□□□□ -1.93
ATXN3-236ENST00000556220 CAMK2N1Q7Z7J9 78 aa3.01□□□□□ -1.93
ATXN3-236ENST00000556220 UQCRQO14949 82 aa3□□□□□ -1.93
ATXN3-236ENST00000556220 TRAV22A0A0B4J277 110 aa2.99□□□□□ -1.93
ATXN3-236ENST00000556220 LINC00208Q96KT6 92 aa2.99□□□□□ -1.93
ATXN3-236ENST00000556220 CYP4F30PQ9H0H9 118 aa2.99□□□□□ -1.93
ATXN3-236ENST00000556220 NDUFS5O43920 106 aa2.97□□□□□ -1.93
ATXN3-236ENST00000556220 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
ATXN3-236ENST00000556220 C1orf64Q8NEQ6 169 aa2.96□□□□□ -1.94
ATXN3-236ENST00000556220 C5orf47Q569G3 176 aa2.95□□□□□ -1.94
ATXN3-236ENST00000556220 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-236ENST00000556220 SMIM20Q8N5G0 67 aa2.94□□□□□ -1.94
ATXN3-236ENST00000556220 TP53AIP1Q9HCN2 124 aa2.94□□□□□ -1.94
ATXN3-236ENST00000556220 C4orf26Q17RF5 130 aa2.92□□□□□ -1.94
ATXN3-236ENST00000556220 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
ATXN3-236ENST00000556220 SMIM26A0A096LP01 95 aa2.9□□□□□ -1.95
ATXN3-236ENST00000556220 LOC101927531A0A1B0GV80 90 aa2.9□□□□□ -1.95
ATXN3-236ENST00000556220 H3BPC8 53 aa2.9□□□□□ -1.95
ATXN3-236ENST00000556220 MP68P56378 58 aa2.88□□□□□ -1.95
ATXN3-236ENST00000556220 C7orf65Q6ZTY9 151 aa2.88□□□□□ -1.95
ATXN3-236ENST00000556220 DMAC1Q96GE9 116 aa2.88□□□□□ -1.95
ATXN3-236ENST00000556220 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
ATXN3-236ENST00000556220 CSAG1Q6PB30 78 aa2.87□□□□□ -1.95
ATXN3-236ENST00000556220 SPANXA2-OT1Q8N9U9 137 aa2.87□□□□□ -1.95
ATXN3-236ENST00000556220 TMEM258P61165 79 aa2.86□□□□□ -1.95
ATXN3-236ENST00000556220 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms