RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 Q6ZRX8 168 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 ACBD7Q8N6N7 88 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 RPL39LQ96EH5 51 aaKnown RBP0.07□□□□□ -2.4
NEK9-208ENST00000555961 MGST2Q99735 147 aa0.07□□□□□ -2.4
NEK9-208ENST00000555961 C7orf77A4D0Y5 90 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 M0QZ58 72 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 CRIP1P50238 77 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 UBE2L3P68036 154 aaKnown RBP0.06□□□□□ -2.4
NEK9-208ENST00000555961 CCDC58Q4VC31 144 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 BAGE3Q86Y29 109 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 DEFB105AQ8NG35 78 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 FAM167A-AS1Q96KT0 104 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 CNFNQ9BYD5 112 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 CYP4F30PQ9H0H9 118 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 KCNQ1DNQ9H478 68 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 AP4S1Q9Y587 144 aa0.06□□□□□ -2.4
NEK9-208ENST00000555961 A0A087WXM4 84 aa0.05□□□□□ -2.4
NEK9-208ENST00000555961 TRBV7-7A0A0K0K1E9 115 aa0.05□□□□□ -2.4
NEK9-208ENST00000555961 I3L3M4 83 aa0.05□□□□□ -2.4
NEK9-208ENST00000555961 GNGT2O14610 69 aa0.05□□□□□ -2.4
NEK9-208ENST00000555961 SNCGO76070 127 aa0.05□□□□□ -2.4
NEK9-208ENST00000555961 Q8IZM0 81 aa0.05□□□□□ -2.4
NEK9-208ENST00000555961 UBE2L5PA0A1B0GUS4 154 aa0.04□□□□□ -2.4
NEK9-208ENST00000555961 LOC100130705A0A1B0GUX0 176 aa0.04□□□□□ -2.4
NEK9-208ENST00000555961 SSSCA1O60232 199 aa0.04□□□□□ -2.4
NEK9-208ENST00000555961 SIX6O95475 246 aa0.04□□□□□ -2.4
NEK9-208ENST00000555961 RPL39P62891 51 aaKnown RBP0.04□□□□□ -2.4
NEK9-208ENST00000555961 S100A12P80511 92 aa0.04□□□□□ -2.4
NEK9-208ENST00000555961 SMIM4Q8WVI0 70 aa0.04□□□□□ -2.4
NEK9-208ENST00000555961 FAM107BQ9H098 131 aa0.04□□□□□ -2.4
NEK9-208ENST00000555961 LINC00472Q9H8W2 130 aa0.04□□□□□ -2.4
NEK9-208ENST00000555961 IGLV5-48A0A075B6I7 105 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 A0A087WVE0 104 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 LOC105371267A0A1B0GV96 52 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 K7EQZ3 153 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 PDCD5O14737 125 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 FCER1GP30273 86 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 GNG11P61952 73 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 UBE2G1P62253 170 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 SMIM2Q9BVW6 85 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 ST20Q9HBF5 79 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 NXT2Q9NPJ8 142 aaKnown RBP0.03□□□□□ -2.4
NEK9-208ENST00000555961 PSENENQ9NZ42 101 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 CACFD1Q9UGQ2 172 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 CDKN2A-AS1Q9UH64 79 aa0.03□□□□□ -2.4
NEK9-208ENST00000555961 TRAV1-2A0A0B4J238 106 aa0.02□□□□□ -2.41
NEK9-208ENST00000555961 LINC01546A6NGU7 62 aa0.02□□□□□ -2.41
NEK9-208ENST00000555961 MT-ATP8P03928 68 aa0.02□□□□□ -2.41
NEK9-208ENST00000555961 C3orf79P0CE67 100 aa0.02□□□□□ -2.41
NEK9-208ENST00000555961 SPCS1Q9Y6A9 102 aa0.02□□□□□ -2.41
NEK9-208ENST00000555961 EFCAB10A6NFE3 127 aa0.01□□□□□ -2.41
NEK9-208ENST00000555961 H3BUT2 72 aa0.01□□□□□ -2.41
NEK9-208ENST00000555961 IFITM1P13164 125 aa0.01□□□□□ -2.41
NEK9-208ENST00000555961 IFI27P40305 119 aaPredicted RBP0.01□□□□□ -2.41
NEK9-208ENST00000555961 POLR2KP53803 58 aaKnown RBP0.01□□□□□ -2.41
NEK9-208ENST00000555961 LINC00158P58513 81 aa0.01□□□□□ -2.41
NEK9-208ENST00000555961 COX17Q14061 63 aa0.01□□□□□ -2.41
NEK9-208ENST00000555961 S100A7L2Q5SY68 101 aa0.01□□□□□ -2.41
NEK9-208ENST00000555961 DEFB107AQ8IZN7 70 aa0.01□□□□□ -2.41
NEK9-208ENST00000555961 C2orf88Q9BSF0 95 aa0.01□□□□□ -2.41
NEK9-208ENST00000555961 SEC11CQ9BY50 192 aa0.01□□□□□ -2.41
NEK9-208ENST00000555961 TRAV13-2A0A0B4J235 113 aa0□□□□□ -2.41
NEK9-208ENST00000555961 ZNF815PA8K554 130 aa0□□□□□ -2.41
NEK9-208ENST00000555961 PPP1R17O96001 155 aa0□□□□□ -2.41
NEK9-208ENST00000555961 SMIM13P0DJ93 91 aa0□□□□□ -2.41
NEK9-208ENST00000555961 COX7BP24311 80 aa0□□□□□ -2.41
NEK9-208ENST00000555961 Q6JHZ5 121 aa0□□□□□ -2.41
NEK9-208ENST00000555961 SPTSSBQ8NFR3 76 aa0□□□□□ -2.41
NEK9-208ENST00000555961 SPANXDQ9BXN6 97 aa0□□□□□ -2.41
NEK9-208ENST00000555961 SERP1Q9Y6X1 66 aa0□□□□□ -2.41
NEK9-208ENST00000555961 HCG22E2RYF7 251 aa-0.01□□□□□ -2.41
NEK9-208ENST00000555961 K7EP34 96 aa-0.01□□□□□ -2.41
NEK9-208ENST00000555961 NDUFC1O43677 76 aa-0.01□□□□□ -2.41
NEK9-208ENST00000555961 SFT2D2O95562 160 aa-0.01□□□□□ -2.41
NEK9-208ENST00000555961 MEIG1Q5JSS6 88 aa-0.01□□□□□ -2.41
NEK9-208ENST00000555961 SEC11AP67812 179 aa-0.02□□□□□ -2.41
NEK9-208ENST00000555961 BAGE2Q86Y30 109 aa-0.02□□□□□ -2.41
NEK9-208ENST00000555961 C8orf59Q8N0T1 100 aaPredicted RBP-0.02□□□□□ -2.41
NEK9-208ENST00000555961 C9orf62Q8N4C0 152 aa-0.02□□□□□ -2.41
NEK9-208ENST00000555961 S100A16Q96FQ6 103 aaKnown RBP-0.02□□□□□ -2.41
NEK9-208ENST00000555961 TMEM167BQ9NRX6 74 aa-0.02□□□□□ -2.41
NEK9-208ENST00000555961 TRAV22A0A0B4J277 110 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 IGIPA6NJ69 53 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 FAM25AB3EWG3 89 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 FAM25CB3EWG5 89 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 FAM25GB3EWG6 89 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 UQCR11O14957 56 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 APOC3P02656 99 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 WHAMMP3Q1A5X7 153 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 MUSTN1Q8IVN3 82 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 Q8N8P6 123 aa-0.03□□□□□ -2.41
NEK9-208ENST00000555961 SMIM31A0A1B0GVY4 71 aa-0.04□□□□□ -2.42
NEK9-208ENST00000555961 TNP1P09430 55 aa-0.04□□□□□ -2.42
NEK9-208ENST00000555961 AKAIN1P0CW23 69 aa-0.04□□□□□ -2.42
NEK9-208ENST00000555961 SFTA2Q6UW10 78 aa-0.04□□□□□ -2.42
NEK9-208ENST00000555961 MRPL34Q9BQ48 92 aaKnown RBP-0.04□□□□□ -2.42
NEK9-208ENST00000555961 C20orf78Q9BR46 151 aa-0.04□□□□□ -2.42
NEK9-208ENST00000555961 TRBV7-4A0A0J9YYF1 115 aa-0.05□□□□□ -2.42
NEK9-208ENST00000555961 MMP24-AS1A0A0U1RRL7 71 aa-0.05□□□□□ -2.42
NEK9-208ENST00000555961 CTXND1A0A1B0GTU2 59 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms