RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 DMBT1Q9UGM3 2413 aaPredicted RBP8.61□□□□□ -1.03
XRCC3-209ENST00000554913 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
XRCC3-209ENST00000554913 EPPK1P58107 5090 aaKnown RBP8.6□□□□□ -1.03
XRCC3-209ENST00000554913 CRIPTQ9P021 101 aa8.59□□□□□ -1.03
XRCC3-209ENST00000554913 TNXBP22105 4242 aa8.58□□□□□ -1.04
XRCC3-209ENST00000554913 K7ERS5 55 aa8.57□□□□□ -1.04
XRCC3-209ENST00000554913 KRTAP17-1Q9BYP8 105 aa8.57□□□□□ -1.04
XRCC3-209ENST00000554913 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
XRCC3-209ENST00000554913 KRTAP10-6P60371 365 aaPredicted RBP8.55□□□□□ -1.04
XRCC3-209ENST00000554913 FAT3Q8TDW7 4589 aa8.54□□□□□ -1.04
XRCC3-209ENST00000554913 MYCBP2O75592 4640 aa8.53□□□□□ -1.04
XRCC3-209ENST00000554913 KRTAP13-4Q3LI77 160 aa8.51□□□□□ -1.05
XRCC3-209ENST00000554913 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
XRCC3-209ENST00000554913 KRTAP3-2Q9BYR7 98 aa8.47□□□□□ -1.05
XRCC3-209ENST00000554913 A0A0D9SG42 100 aa8.47□□□□□ -1.05
XRCC3-209ENST00000554913 RPL37P61927 97 aaKnown RBP8.47□□□□□ -1.05
XRCC3-209ENST00000554913 ROMO1P60602 79 aa8.44□□□□□ -1.06
XRCC3-209ENST00000554913 Q5VSD8 79 aa8.43□□□□□ -1.06
XRCC3-209ENST00000554913 XP32Q5T750 250 aa8.42□□□□□ -1.06
XRCC3-209ENST00000554913 S4R3F8 94 aa8.42□□□□□ -1.06
XRCC3-209ENST00000554913 P0C880 135 aa8.38□□□□□ -1.07
XRCC3-209ENST00000554913 TPRXLQ17RH7 258 aa8.3□□□□□ -1.08
XRCC3-209ENST00000554913 A0A0A0MQY5 61 aa8.29□□□□□ -1.08
XRCC3-209ENST00000554913 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
XRCC3-209ENST00000554913 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
XRCC3-209ENST00000554913 MT1HL1P0DM35 61 aa8.21□□□□□ -1.1
XRCC3-209ENST00000554913 ABCA13Q86UQ4 5058 aa8.2□□□□□ -1.1
XRCC3-209ENST00000554913 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
XRCC3-209ENST00000554913 LPAP08519 4548 aa8.18□□□□□ -1.1
XRCC3-209ENST00000554913 KRTAP12-1P59990 96 aa8.15□□□□□ -1.1
XRCC3-209ENST00000554913 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.1
XRCC3-209ENST00000554913 LRP2P98164 4655 aa8.12□□□□□ -1.11
XRCC3-209ENST00000554913 HERC2O95714 4834 aa8.07□□□□□ -1.12
XRCC3-209ENST00000554913 M0QZ58 72 aa8.02□□□□□ -1.12
XRCC3-209ENST00000554913 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
XRCC3-209ENST00000554913 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
XRCC3-209ENST00000554913 R4GN34 69 aa7.84□□□□□ -1.15
XRCC3-209ENST00000554913 NDUFAF8A1L188 74 aa7.83□□□□□ -1.16
XRCC3-209ENST00000554913 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
XRCC3-209ENST00000554913 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
XRCC3-209ENST00000554913 HERC1Q15751 4861 aa7.77□□□□□ -1.17
XRCC3-209ENST00000554913 J3QL48 77 aa7.71□□□□□ -1.18
XRCC3-209ENST00000554913 MUC17Q685J3 4493 aa7.71□□□□□ -1.18
XRCC3-209ENST00000554913 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
XRCC3-209ENST00000554913 MUC2Q02817 5179 aa7.68□□□□□ -1.18
XRCC3-209ENST00000554913 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
XRCC3-209ENST00000554913 HMCN2Q8NDA2 5059 aa7.56□□□□□ -1.2
XRCC3-209ENST00000554913 KRTAP19-2Q3LHN2 52 aa7.55□□□□□ -1.2
XRCC3-209ENST00000554913 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
XRCC3-209ENST00000554913 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.21
XRCC3-209ENST00000554913 LUZP6Q538Z0 58 aa7.41□□□□□ -1.22
XRCC3-209ENST00000554913 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
XRCC3-209ENST00000554913 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
XRCC3-209ENST00000554913 FLGP20930 4061 aaPredicted RBP7.31□□□□□ -1.24
XRCC3-209ENST00000554913 RNF213Q63HN8 5207 aa7.31□□□□□ -1.24
XRCC3-209ENST00000554913 UBR4Q5T4S7 5183 aa7.3□□□□□ -1.24
XRCC3-209ENST00000554913 TNP1P09430 55 aa7.19□□□□□ -1.26
XRCC3-209ENST00000554913 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
XRCC3-209ENST00000554913 KRTAP23-1A1A580 65 aa7.06□□□□□ -1.28
XRCC3-209ENST00000554913 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
XRCC3-209ENST00000554913 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
XRCC3-209ENST00000554913 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.29
XRCC3-209ENST00000554913 MT1HP80294 61 aa6.88□□□□□ -1.31
XRCC3-209ENST00000554913 M0R2T5 61 aa6.87□□□□□ -1.31
XRCC3-209ENST00000554913 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
XRCC3-209ENST00000554913 MT1FP04733 61 aa6.78□□□□□ -1.32
XRCC3-209ENST00000554913 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
XRCC3-209ENST00000554913 MT2AP02795 61 aa6.76□□□□□ -1.33
XRCC3-209ENST00000554913 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
XRCC3-209ENST00000554913 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
XRCC3-209ENST00000554913 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
XRCC3-209ENST00000554913 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
XRCC3-209ENST00000554913 MT1BP07438 61 aa6.58□□□□□ -1.36
XRCC3-209ENST00000554913 MT1XP80297 61 aa6.57□□□□□ -1.36
XRCC3-209ENST00000554913 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
XRCC3-209ENST00000554913 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
XRCC3-209ENST00000554913 KRTAP10-7P60409 375 aaPredicted RBP6.43□□□□□ -1.38
XRCC3-209ENST00000554913 KRTAP9-3Q9BYQ3 159 aa6.42□□□□□ -1.38
XRCC3-209ENST00000554913 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
XRCC3-209ENST00000554913 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.39
XRCC3-209ENST00000554913 USH2AO75445 5202 aa6.38□□□□□ -1.39
XRCC3-209ENST00000554913 LCE2BO14633 110 aa6.26□□□□□ -1.41
XRCC3-209ENST00000554913 INE1O15225 51 aa6.21□□□□□ -1.42
XRCC3-209ENST00000554913 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
XRCC3-209ENST00000554913 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
XRCC3-209ENST00000554913 KMT2DO14686 5537 aa6.07□□□□□ -1.44
XRCC3-209ENST00000554913 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
XRCC3-209ENST00000554913 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
XRCC3-209ENST00000554913 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
XRCC3-209ENST00000554913 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
XRCC3-209ENST00000554913 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
XRCC3-209ENST00000554913 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
XRCC3-209ENST00000554913 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
XRCC3-209ENST00000554913 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
XRCC3-209ENST00000554913 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
XRCC3-209ENST00000554913 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
XRCC3-209ENST00000554913 MT1LQ93083 61 aa5.69□□□□□ -1.5
XRCC3-209ENST00000554913 KRTAP19-6Q3LI70 58 aa5.67□□□□□ -1.5
XRCC3-209ENST00000554913 MT1EP04732 61 aa5.66□□□□□ -1.5
XRCC3-209ENST00000554913 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms