RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 TNP1P09430 55 aa1.89□□□□□ -2.11
KTN1-217ENST00000554831 MT1HL1P0DM35 61 aa1.89□□□□□ -2.11
KTN1-217ENST00000554831 LRP1BQ9NZR2 4599 aa1.88□□□□□ -2.11
KTN1-217ENST00000554831 DNAH5Q8TE73 4624 aa1.88□□□□□ -2.11
KTN1-217ENST00000554831 FAT1Q14517 4588 aa1.88□□□□□ -2.11
KTN1-217ENST00000554831 DNAH7Q8WXX0 4024 aa1.88□□□□□ -2.11
KTN1-217ENST00000554831 DNAH10Q8IVF4 4471 aa1.87□□□□□ -2.11
KTN1-217ENST00000554831 KIAA1109Q2LD37 5005 aa1.87□□□□□ -2.11
KTN1-217ENST00000554831 DNAH8Q96JB1 4490 aa1.86□□□□□ -2.11
KTN1-217ENST00000554831 DNAH1Q9P2D7 4330 aa1.85□□□□□ -2.11
KTN1-217ENST00000554831 VPS13DQ5THJ4 4388 aa1.85□□□□□ -2.11
KTN1-217ENST00000554831 CMYA5Q8N3K9 4069 aa1.85□□□□□ -2.11
KTN1-217ENST00000554831 MYCBP2O75592 4640 aa1.84□□□□□ -2.11
KTN1-217ENST00000554831 RYR1P21817 5038 aa1.84□□□□□ -2.11
KTN1-217ENST00000554831 KRTAP10-7P60409 375 aaPredicted RBP1.84□□□□□ -2.12
KTN1-217ENST00000554831 STARD9Q9P2P6 4700 aa1.84□□□□□ -2.12
KTN1-217ENST00000554831 DNAH17Q9UFH2 4485 aa1.83□□□□□ -2.12
KTN1-217ENST00000554831 DYNC1H1Q14204 4646 aaKnown RBP1.82□□□□□ -2.12
KTN1-217ENST00000554831 PRKDCP78527 4128 aaKnown RBP1.81□□□□□ -2.12
KTN1-217ENST00000554831 DNAH2Q9P225 4427 aa1.81□□□□□ -2.12
KTN1-217ENST00000554831 KMT2CQ8NEZ4 4911 aaKnown RBP1.81□□□□□ -2.12
KTN1-217ENST00000554831 KRTAP15-1Q3LI76 137 aa1.79□□□□□ -2.12
KTN1-217ENST00000554831 FAT2Q9NYQ8 4349 aa1.79□□□□□ -2.12
KTN1-217ENST00000554831 PRO2289Q9P1D8 64 aa1.78□□□□□ -2.12
KTN1-217ENST00000554831 HYDINQ4G0P3 5121 aa1.78□□□□□ -2.13
KTN1-217ENST00000554831 KRTAP19-4Q3LI73 84 aa1.77□□□□□ -2.13
KTN1-217ENST00000554831 SACSQ9NZJ4 4579 aa1.76□□□□□ -2.13
KTN1-217ENST00000554831 KRTAP10-10P60014 251 aa1.76□□□□□ -2.13
KTN1-217ENST00000554831 FAT3Q8TDW7 4589 aa1.76□□□□□ -2.13
KTN1-217ENST00000554831 KMT2AQ03164 3969 aa1.75□□□□□ -2.13
KTN1-217ENST00000554831 RYR3Q15413 4870 aa1.75□□□□□ -2.13
KTN1-217ENST00000554831 LRP1Q07954 4544 aaKnown RBP1.75□□□□□ -2.13
KTN1-217ENST00000554831 HECTD4Q9Y4D8 3996 aa1.75□□□□□ -2.13
KTN1-217ENST00000554831 KRTAP4-5Q9BYR2 181 aa1.74□□□□□ -2.13
KTN1-217ENST00000554831 INE1O15225 51 aa1.74□□□□□ -2.13
KTN1-217ENST00000554831 LORP23490 312 aaPredicted RBP1.73□□□□□ -2.13
KTN1-217ENST00000554831 APOBP04114 4563 aaKnown RBP1.73□□□□□ -2.13
KTN1-217ENST00000554831 DYNC2H1Q8NCM8 4307 aaKnown RBP1.73□□□□□ -2.13
KTN1-217ENST00000554831 LRP2P98164 4655 aa1.72□□□□□ -2.13
KTN1-217ENST00000554831 VPS13BQ7Z7G8 4022 aa1.72□□□□□ -2.13
KTN1-217ENST00000554831 PKHD1P08F94 4074 aa1.71□□□□□ -2.14
KTN1-217ENST00000554831 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
KTN1-217ENST00000554831 DNAH3Q8TD57 4116 aa1.7□□□□□ -2.14
KTN1-217ENST00000554831 LOC100996750A0A140TA64 210 aa1.7□□□□□ -2.14
KTN1-217ENST00000554831 KRTAP4-6Q9BYQ5 205 aa1.7□□□□□ -2.14
KTN1-217ENST00000554831 KRTAP4-1Q9BYQ7 146 aa1.69□□□□□ -2.14
KTN1-217ENST00000554831 DNAH6Q9C0G6 4158 aa1.69□□□□□ -2.14
KTN1-217ENST00000554831 EPPK1P58107 5090 aaKnown RBP1.68□□□□□ -2.14
KTN1-217ENST00000554831 ALMS1Q8TCU4 4167 aa1.66□□□□□ -2.14
KTN1-217ENST00000554831 MUC2Q02817 5179 aa1.66□□□□□ -2.14
KTN1-217ENST00000554831 HERC2O95714 4834 aa1.66□□□□□ -2.14
KTN1-217ENST00000554831 RYR2Q92736 4967 aa1.66□□□□□ -2.14
KTN1-217ENST00000554831 PCLOQ9Y6V0 5065 aa1.65□□□□□ -2.15
KTN1-217ENST00000554831 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
KTN1-217ENST00000554831 ABCA13Q86UQ4 5058 aa1.63□□□□□ -2.15
KTN1-217ENST00000554831 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
KTN1-217ENST00000554831 LCE2DQ5TA82 110 aaPredicted RBP1.61□□□□□ -2.15
KTN1-217ENST00000554831 HSPG2P98160 4391 aa1.61□□□□□ -2.15
KTN1-217ENST00000554831 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
KTN1-217ENST00000554831 KRTAP12-3P60328 96 aa1.61□□□□□ -2.15
KTN1-217ENST00000554831 KRTAP10-12P60413 245 aa1.61□□□□□ -2.15
KTN1-217ENST00000554831 RNF213Q63HN8 5207 aa1.6□□□□□ -2.15
KTN1-217ENST00000554831 KRTAP8-1Q8IUC2 63 aa1.6□□□□□ -2.15
KTN1-217ENST00000554831 LCE3AQ5TA76 89 aa1.6□□□□□ -2.15
KTN1-217ENST00000554831 KRTAP19-1Q8IUB9 90 aa1.59□□□□□ -2.15
KTN1-217ENST00000554831 MT3P25713 68 aa1.59□□□□□ -2.16
KTN1-217ENST00000554831 HERC1Q15751 4861 aa1.58□□□□□ -2.16
KTN1-217ENST00000554831 MT2AP02795 61 aa1.58□□□□□ -2.16
KTN1-217ENST00000554831 LPAP08519 4548 aa1.57□□□□□ -2.16
KTN1-217ENST00000554831 KRTAP19-2Q3LHN2 52 aa1.57□□□□□ -2.16
KTN1-217ENST00000554831 PKD1P98161 4303 aa1.57□□□□□ -2.16
KTN1-217ENST00000554831 MT1HP80294 61 aa1.56□□□□□ -2.16
KTN1-217ENST00000554831 OBSCNQ5VST9 7968 aa1.56□□□□□ -2.16
KTN1-217ENST00000554831 MUC17Q685J3 4493 aa1.55□□□□□ -2.16
KTN1-217ENST00000554831 SPRR5A0A1B0GTR4 108 aa1.55□□□□□ -2.16
KTN1-217ENST00000554831 MT1FP04733 61 aa1.55□□□□□ -2.16
KTN1-217ENST00000554831 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
KTN1-217ENST00000554831 FAT4Q6V0I7 4981 aa1.53□□□□□ -2.16
KTN1-217ENST00000554831 LCE2CQ5TA81 110 aa1.53□□□□□ -2.17
KTN1-217ENST00000554831 UBR4Q5T4S7 5183 aa1.52□□□□□ -2.17
KTN1-217ENST00000554831 KRTAP9-8Q9BYQ0 159 aa1.5□□□□□ -2.17
KTN1-217ENST00000554831 BIRC6Q9NR09 4857 aa1.49□□□□□ -2.17
KTN1-217ENST00000554831 MT1BP07438 61 aa1.49□□□□□ -2.17
KTN1-217ENST00000554831 MT1XP80297 61 aa1.48□□□□□ -2.17
KTN1-217ENST00000554831 HMCN2Q8NDA2 5059 aa1.47□□□□□ -2.17
KTN1-217ENST00000554831 KRTAP10-5P60370 271 aa1.47□□□□□ -2.17
KTN1-217ENST00000554831 LCE2AQ5TA79 106 aaPredicted RBP1.46□□□□□ -2.18
KTN1-217ENST00000554831 PKHD1L1Q86WI1 4243 aa1.46□□□□□ -2.18
KTN1-217ENST00000554831 FLGP20930 4061 aaPredicted RBP1.45□□□□□ -2.18
KTN1-217ENST00000554831 LCE2BO14633 110 aa1.45□□□□□ -2.18
KTN1-217ENST00000554831 KRTAP19-5Q3LI72 72 aa1.44□□□□□ -2.18
KTN1-217ENST00000554831 LCE3CQ5T5A8 94 aa1.44□□□□□ -2.18
KTN1-217ENST00000554831 KRTAP9-3Q9BYQ3 159 aa1.44□□□□□ -2.18
KTN1-217ENST00000554831 TNXBP22105 4242 aa1.44□□□□□ -2.18
KTN1-217ENST00000554831 USH2AO75445 5202 aa1.42□□□□□ -2.18
KTN1-217ENST00000554831 FSIP2Q5CZC0 6907 aa1.42□□□□□ -2.18
KTN1-217ENST00000554831 DSTQ03001 7570 aaKnown RBP1.39□□□□□ -2.19
KTN1-217ENST00000554831 KRTAP4-8A0A0G2JLE6 195 aa1.38□□□□□ -2.19
KTN1-217ENST00000554831 KRTAP9-6A0A140TA67 174 aa1.38□□□□□ -2.19
KTN1-217ENST00000554831 KRTAP9-7A8MTY7 169 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms