RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 RNASE4P34096 147 aaKnown RBP1.58□□□□□ -2.16
CHD8-207ENST00000554384 SPANXN1Q5VSR9 72 aa1.58□□□□□ -2.16
CHD8-207ENST00000554384 Q8TAT8 98 aa1.58□□□□□ -2.16
CHD8-207ENST00000554384 BRK1Q8WUW1 75 aa1.58□□□□□ -2.16
CHD8-207ENST00000554384 DSCR8Q96T75 97 aa1.58□□□□□ -2.16
CHD8-207ENST00000554384 CYP4F30PQ9H0H9 118 aa1.58□□□□□ -2.16
CHD8-207ENST00000554384 NDUFA1O15239 70 aa1.57□□□□□ -2.16
CHD8-207ENST00000554384 NDUFB1O75438 58 aa1.57□□□□□ -2.16
CHD8-207ENST00000554384 UBE2BP63146 152 aa1.57□□□□□ -2.16
CHD8-207ENST00000554384 RBM3P98179 157 aaKnown RBP1.57□□□□□ -2.16
CHD8-207ENST00000554384 ATP11AUNQ6ZP68 121 aa1.57□□□□□ -2.16
CHD8-207ENST00000554384 MDN1Q9NU22 5596 aa1.56□□□□□ -2.16
CHD8-207ENST00000554384 LOC110117498A0A087WWA1 95 aa1.56□□□□□ -2.16
CHD8-207ENST00000554384 A8MTW9 85 aa1.56□□□□□ -2.16
CHD8-207ENST00000554384 ELOF1P60002 83 aaKnown RBP1.56□□□□□ -2.16
CHD8-207ENST00000554384 C20orf197Q8N268 126 aa1.56□□□□□ -2.16
CHD8-207ENST00000554384 LIMD2Q9BT23 127 aa1.56□□□□□ -2.16
CHD8-207ENST00000554384 LINC00846Q9NV44 126 aa1.56□□□□□ -2.16
CHD8-207ENST00000554384 ORMDL1Q9P0S3 153 aa1.56□□□□□ -2.16
CHD8-207ENST00000554384 NDUFA12Q9UI09 145 aa1.56□□□□□ -2.16
CHD8-207ENST00000554384 TRAV12-3A0A0B4J271 114 aa1.55□□□□□ -2.16
CHD8-207ENST00000554384 S100A4P26447 101 aaKnown RBP1.55□□□□□ -2.16
CHD8-207ENST00000554384 FAM74A4Q5TZK3 123 aa1.55□□□□□ -2.16
CHD8-207ENST00000554384 LINC00308Q8TCZ7 52 aa1.55□□□□□ -2.16
CHD8-207ENST00000554384 TRBV7-4A0A0J9YYF1 115 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 F8WEM9 126 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 COX6A2Q02221 97 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 KRTAP19-6Q3LI70 58 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 C1orf137Q5JT78 98 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 COX6B2Q6YFQ2 88 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 LCA10Q71F78 164 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 TMEM254Q8TBM7 123 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 CLEC2BQ92478 149 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 DIRC1Q969H9 104 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 C22orf24Q9Y442 160 aa1.54□□□□□ -2.16
CHD8-207ENST00000554384 TRBV6-8A0A0A6YYG3 113 aa1.53□□□□□ -2.16
CHD8-207ENST00000554384 hDV103S1A0JD37 113 aa1.53□□□□□ -2.16
CHD8-207ENST00000554384 M0QY20 66 aa1.53□□□□□ -2.16
CHD8-207ENST00000554384 M0R378 163 aa1.53□□□□□ -2.16
CHD8-207ENST00000554384 COX17Q14061 63 aa1.53□□□□□ -2.16
CHD8-207ENST00000554384 KRTAP2-1Q9BYU5 128 aa1.53□□□□□ -2.16
CHD8-207ENST00000554384 IGKV2-40A0A087WW87 121 aaPredicted RBP1.52□□□□□ -2.17
CHD8-207ENST00000554384 IGKV3D-7A0A0C4DH55 119 aa1.52□□□□□ -2.17
CHD8-207ENST00000554384 LOC101927531A0A1B0GV80 90 aa1.52□□□□□ -2.17
CHD8-207ENST00000554384 IGKV2D-40P01614 121 aaPredicted RBP1.52□□□□□ -2.17
CHD8-207ENST00000554384 RNASE3P12724 160 aaKnown RBP1.52□□□□□ -2.17
CHD8-207ENST00000554384 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.52□□□□□ -2.17
CHD8-207ENST00000554384 CYSTM1Q9H1C7 97 aa1.52□□□□□ -2.17
CHD8-207ENST00000554384 TRAV23DV6A0A075B6W5 121 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 A0A096LNI7 61 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 TRBV10-1A0A0K0K1A3 114 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 TRBV6-4A0A1B0GX49 114 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 MGPP08493 103 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 NREPQ16612 68 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 CLPSL2Q6UWE3 100 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 ENHOQ6UWT2 76 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 Q6ZQT0 140 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 C14orf132Q9NPU4 83 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 CDC42SE1Q9NRR8 79 aa1.51□□□□□ -2.17
CHD8-207ENST00000554384 A0A087WVE0 104 aa1.5□□□□□ -2.17
CHD8-207ENST00000554384 IGKV3OR2-268A0A0C4DH90 116 aa1.5□□□□□ -2.17
CHD8-207ENST00000554384 ANGP03950 147 aaKnown RBP1.5□□□□□ -2.17
CHD8-207ENST00000554384 RPL39P62891 51 aaKnown RBP1.5□□□□□ -2.17
CHD8-207ENST00000554384 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
CHD8-207ENST00000554384 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.5□□□□□ -2.17
CHD8-207ENST00000554384 LINC00269Q8N2A0 174 aa1.5□□□□□ -2.17
CHD8-207ENST00000554384 SMIM11BQ8TCY0 68 aa1.5□□□□□ -2.17
CHD8-207ENST00000554384 RPL39LQ96EH5 51 aaKnown RBP1.5□□□□□ -2.17
CHD8-207ENST00000554384 LINC00474Q9P2X8 69 aa1.5□□□□□ -2.17
CHD8-207ENST00000554384 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
CHD8-207ENST00000554384 TRAV22A0A0B4J277 110 aa1.49□□□□□ -2.17
CHD8-207ENST00000554384 A6NN06 94 aa1.49□□□□□ -2.17
CHD8-207ENST00000554384 HCG22E2RYF7 251 aa1.49□□□□□ -2.17
CHD8-207ENST00000554384 COX7BP24311 80 aa1.49□□□□□ -2.17
CHD8-207ENST00000554384 LINC01554Q52M75 96 aa1.49□□□□□ -2.17
CHD8-207ENST00000554384 NCR3O14931 201 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 MT2AP02795 61 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 MT1FP04733 61 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 C9orf116Q5BN46 136 aaPredicted RBP1.48□□□□□ -2.17
CHD8-207ENST00000554384 LINC00575Q6W349 94 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 SOSTDC1Q6X4U4 206 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 COX7B2Q8TF08 81 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 KCNQ1DNQ9H478 68 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 CDC42SE2Q9NRR3 84 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 CDKN2A-AS1Q9UH64 79 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 SNURFQ9Y675 71 aa1.48□□□□□ -2.17
CHD8-207ENST00000554384 ETDCA0A1B0GVM5 59 aa1.47□□□□□ -2.17
CHD8-207ENST00000554384 Q5VV11 94 aa1.47□□□□□ -2.17
CHD8-207ENST00000554384 KRTAP26-1Q6PEX3 210 aa1.47□□□□□ -2.17
CHD8-207ENST00000554384 Q8IZM0 81 aa1.47□□□□□ -2.17
CHD8-207ENST00000554384 LINC01558Q9Y6Z2 57 aa1.47□□□□□ -2.17
CHD8-207ENST00000554384 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
CHD8-207ENST00000554384 CHKB-CPT1BH3BT56 60 aa1.46□□□□□ -2.18
CHD8-207ENST00000554384 SPRR2EP22531 72 aa1.46□□□□□ -2.18
CHD8-207ENST00000554384 SPRR2BP35325 72 aa1.46□□□□□ -2.18
CHD8-207ENST00000554384 SPRR2AP35326 72 aa1.46□□□□□ -2.18
CHD8-207ENST00000554384 LINC00158P58513 81 aa1.46□□□□□ -2.18
CHD8-207ENST00000554384 CASC2Q6XLA1 102 aa1.46□□□□□ -2.18
CHD8-207ENST00000554384 LINC00208Q96KT6 92 aa1.46□□□□□ -2.18
CHD8-207ENST00000554384 IGLV5-48A0A075B6I7 105 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms