RNA–Protein interactions for RNA: ENST00000554125.5

GPATCH2L-204, Transcript of G-patch domain containing 2 like, humanhuman

TSL 1 (best)

Gene GPATCH2L, Length 6,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH2L-204ENST00000554125 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
GPATCH2L-204ENST00000554125 STARD9Q9P2P6 4700 aa5.34□□□□□ -1.55
GPATCH2L-204ENST00000554125 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
GPATCH2L-204ENST00000554125 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
GPATCH2L-204ENST00000554125 LRP1BQ9NZR2 4599 aa5.31□□□□□ -1.56
GPATCH2L-204ENST00000554125 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
GPATCH2L-204ENST00000554125 FAT2Q9NYQ8 4349 aa5.29□□□□□ -1.56
GPATCH2L-204ENST00000554125 DYNC2H1Q8NCM8 4307 aaKnown RBP5.27□□□□□ -1.57
GPATCH2L-204ENST00000554125 KRTAP3-3Q9BYR6 98 aa5.25□□□□□ -1.57
GPATCH2L-204ENST00000554125 DNAH3Q8TD57 4116 aa5.24□□□□□ -1.57
GPATCH2L-204ENST00000554125 DNAH6Q9C0G6 4158 aa5.23□□□□□ -1.57
GPATCH2L-204ENST00000554125 DNAH2Q9P225 4427 aa5.21□□□□□ -1.58
GPATCH2L-204ENST00000554125 RYR1P21817 5038 aa5.18□□□□□ -1.58
GPATCH2L-204ENST00000554125 CMYA5Q8N3K9 4069 aa5.17□□□□□ -1.58
GPATCH2L-204ENST00000554125 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
GPATCH2L-204ENST00000554125 KRTAP3-2Q9BYR7 98 aa5.16□□□□□ -1.58
GPATCH2L-204ENST00000554125 CSMD3Q7Z407 3707 aa5.16□□□□□ -1.58
GPATCH2L-204ENST00000554125 FAT1Q14517 4588 aa5.16□□□□□ -1.58
GPATCH2L-204ENST00000554125 MT1HP80294 61 aa5.16□□□□□ -1.58
GPATCH2L-204ENST00000554125 SACSQ9NZJ4 4579 aa5.12□□□□□ -1.59
GPATCH2L-204ENST00000554125 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
GPATCH2L-204ENST00000554125 RYR3Q15413 4870 aa5.08□□□□□ -1.6
GPATCH2L-204ENST00000554125 KMT2AQ03164 3969 aa5.08□□□□□ -1.6
GPATCH2L-204ENST00000554125 BIRC6Q9NR09 4857 aa5.07□□□□□ -1.6
GPATCH2L-204ENST00000554125 DNAH8Q96JB1 4490 aa5.06□□□□□ -1.6
GPATCH2L-204ENST00000554125 KRTAP17-1Q9BYP8 105 aa5.05□□□□□ -1.6
GPATCH2L-204ENST00000554125 RYR2Q92736 4967 aa5.05□□□□□ -1.6
GPATCH2L-204ENST00000554125 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
GPATCH2L-204ENST00000554125 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
GPATCH2L-204ENST00000554125 KIAA1109Q2LD37 5005 aa5.02□□□□□ -1.61
GPATCH2L-204ENST00000554125 MT2AP02795 61 aa4.99□□□□□ -1.61
GPATCH2L-204ENST00000554125 DNAH7Q8WXX0 4024 aa4.98□□□□□ -1.61
GPATCH2L-204ENST00000554125 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.61
GPATCH2L-204ENST00000554125 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
GPATCH2L-204ENST00000554125 VPS13BQ7Z7G8 4022 aa4.92□□□□□ -1.62
GPATCH2L-204ENST00000554125 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
GPATCH2L-204ENST00000554125 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
GPATCH2L-204ENST00000554125 H3BS24 57 aa4.88□□□□□ -1.63
GPATCH2L-204ENST00000554125 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
GPATCH2L-204ENST00000554125 HERC2O95714 4834 aa4.87□□□□□ -1.63
GPATCH2L-204ENST00000554125 MT1FP04733 61 aa4.87□□□□□ -1.63
GPATCH2L-204ENST00000554125 LYSTQ99698 3801 aa4.87□□□□□ -1.63
GPATCH2L-204ENST00000554125 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
GPATCH2L-204ENST00000554125 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
GPATCH2L-204ENST00000554125 HSPG2P98160 4391 aa4.83□□□□□ -1.64
GPATCH2L-204ENST00000554125 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
GPATCH2L-204ENST00000554125 HYDINQ4G0P3 5121 aa4.78□□□□□ -1.64
GPATCH2L-204ENST00000554125 HECTD4Q9Y4D8 3996 aa4.78□□□□□ -1.64
GPATCH2L-204ENST00000554125 LRP1Q07954 4544 aaKnown RBP4.73□□□□□ -1.65
GPATCH2L-204ENST00000554125 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
GPATCH2L-204ENST00000554125 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
GPATCH2L-204ENST00000554125 HERC1Q15751 4861 aa4.71□□□□□ -1.66
GPATCH2L-204ENST00000554125 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
GPATCH2L-204ENST00000554125 KMT2CQ8NEZ4 4911 aaKnown RBP4.64□□□□□ -1.67
GPATCH2L-204ENST00000554125 PKD1P98161 4303 aa4.63□□□□□ -1.67
GPATCH2L-204ENST00000554125 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
GPATCH2L-204ENST00000554125 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
GPATCH2L-204ENST00000554125 PKHD1P08F94 4074 aa4.62□□□□□ -1.67
GPATCH2L-204ENST00000554125 FRAS1Q86XX4 4008 aa4.61□□□□□ -1.67
GPATCH2L-204ENST00000554125 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
GPATCH2L-204ENST00000554125 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
GPATCH2L-204ENST00000554125 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
GPATCH2L-204ENST00000554125 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
GPATCH2L-204ENST00000554125 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
GPATCH2L-204ENST00000554125 EPPK1P58107 5090 aaKnown RBP4.51□□□□□ -1.69
GPATCH2L-204ENST00000554125 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
GPATCH2L-204ENST00000554125 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
GPATCH2L-204ENST00000554125 LRP2P98164 4655 aa4.46□□□□□ -1.69
GPATCH2L-204ENST00000554125 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.69
GPATCH2L-204ENST00000554125 MT1BP07438 61 aa4.44□□□□□ -1.7
GPATCH2L-204ENST00000554125 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
GPATCH2L-204ENST00000554125 TNXBP22105 4242 aa4.43□□□□□ -1.7
GPATCH2L-204ENST00000554125 SPRR2EP22531 72 aa4.43□□□□□ -1.7
GPATCH2L-204ENST00000554125 SPRR2BP35325 72 aa4.43□□□□□ -1.7
GPATCH2L-204ENST00000554125 SPRR2AP35326 72 aa4.43□□□□□ -1.7
GPATCH2L-204ENST00000554125 KRTAP19-2Q3LHN2 52 aa4.42□□□□□ -1.7
GPATCH2L-204ENST00000554125 ABCA13Q86UQ4 5058 aa4.42□□□□□ -1.7
GPATCH2L-204ENST00000554125 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
GPATCH2L-204ENST00000554125 MT1XP80297 61 aa4.38□□□□□ -1.71
GPATCH2L-204ENST00000554125 LPAP08519 4548 aa4.36□□□□□ -1.71
GPATCH2L-204ENST00000554125 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
GPATCH2L-204ENST00000554125 MUC17Q685J3 4493 aa4.32□□□□□ -1.72
GPATCH2L-204ENST00000554125 LCE2AQ5TA79 106 aaPredicted RBP4.32□□□□□ -1.72
GPATCH2L-204ENST00000554125 SPRR2DP22532 72 aa4.3□□□□□ -1.72
GPATCH2L-204ENST00000554125 LCE2BO14633 110 aa4.3□□□□□ -1.72
GPATCH2L-204ENST00000554125 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
GPATCH2L-204ENST00000554125 INE1O15225 51 aa4.25□□□□□ -1.73
GPATCH2L-204ENST00000554125 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
GPATCH2L-204ENST00000554125 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
GPATCH2L-204ENST00000554125 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
GPATCH2L-204ENST00000554125 MT1GP13640 62 aa4.18□□□□□ -1.74
GPATCH2L-204ENST00000554125 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
GPATCH2L-204ENST00000554125 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
GPATCH2L-204ENST00000554125 RNF213Q63HN8 5207 aa4.15□□□□□ -1.74
GPATCH2L-204ENST00000554125 FAT4Q6V0I7 4981 aa4.14□□□□□ -1.75
GPATCH2L-204ENST00000554125 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
GPATCH2L-204ENST00000554125 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
GPATCH2L-204ENST00000554125 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
GPATCH2L-204ENST00000554125 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
GPATCH2L-204ENST00000554125 MT1EP04732 61 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms