RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 HIST1H2BMQ99879 126 aa2.83□□□□□ -1.96
ATXN3-224ENST00000554040 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
ATXN3-224ENST00000554040 TMEM256-PLSCR3K7ERE1 68 aa2.82□□□□□ -1.96
ATXN3-224ENST00000554040 C7orf65Q6ZTY9 151 aa2.82□□□□□ -1.96
ATXN3-224ENST00000554040 LCA10Q71F78 164 aa2.82□□□□□ -1.96
ATXN3-224ENST00000554040 S4R3F8 94 aa2.82□□□□□ -1.96
ATXN3-224ENST00000554040 MRPL34Q9BQ48 92 aaKnown RBP2.81□□□□□ -1.96
ATXN3-224ENST00000554040 ORMDL1Q9P0S3 153 aa2.81□□□□□ -1.96
ATXN3-224ENST00000554040 RBM3P98179 157 aaKnown RBP2.8□□□□□ -1.96
ATXN3-224ENST00000554040 Q6ZQT0 140 aa2.8□□□□□ -1.96
ATXN3-224ENST00000554040 DNAL4O96015 105 aa2.79□□□□□ -1.96
ATXN3-224ENST00000554040 Q5W150 140 aa2.79□□□□□ -1.96
ATXN3-224ENST00000554040 TMEM254Q8TBM7 123 aa2.79□□□□□ -1.96
ATXN3-224ENST00000554040 A0A0B4J2C4 111 aa2.78□□□□□ -1.96
ATXN3-224ENST00000554040 NDUFS5O43920 106 aa2.78□□□□□ -1.96
ATXN3-224ENST00000554040 COA6Q5JTJ3 125 aaKnown RBP2.77□□□□□ -1.97
ATXN3-224ENST00000554040 MMP24-AS1A0A0U1RRL7 71 aa2.76□□□□□ -1.97
ATXN3-224ENST00000554040 hDV103S1A0JD37 113 aa2.75□□□□□ -1.97
ATXN3-224ENST00000554040 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
ATXN3-224ENST00000554040 C9JAW5 83 aa2.74□□□□□ -1.97
ATXN3-224ENST00000554040 CEND1Q8N111 149 aa2.74□□□□□ -1.97
ATXN3-224ENST00000554040 C1orf64Q8NEQ6 169 aa2.74□□□□□ -1.97
ATXN3-224ENST00000554040 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
ATXN3-224ENST00000554040 PRO1854Q9UHT4 67 aa2.74□□□□□ -1.97
ATXN3-224ENST00000554040 PRO0461Q9UI25 63 aa2.74□□□□□ -1.97
ATXN3-224ENST00000554040 K7EQZ3 153 aa2.73□□□□□ -1.97
ATXN3-224ENST00000554040 COX8AP10176 69 aa2.72□□□□□ -1.97
ATXN3-224ENST00000554040 FAM240AA0A1B0GVK7 77 aa2.71□□□□□ -1.98
ATXN3-224ENST00000554040 A0A1B0GW54 56 aa2.71□□□□□ -1.98
ATXN3-224ENST00000554040 DLEU1O43261 78 aa2.71□□□□□ -1.98
ATXN3-224ENST00000554040 A8MUN3 132 aa2.7□□□□□ -1.98
ATXN3-224ENST00000554040 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
ATXN3-224ENST00000554040 HIST3H2BBQ8N257 126 aa2.69□□□□□ -1.98
ATXN3-224ENST00000554040 HIGD1BQ9P298 99 aa2.69□□□□□ -1.98
ATXN3-224ENST00000554040 PSPHP1O15172 72 aa2.68□□□□□ -1.98
ATXN3-224ENST00000554040 COX6CP09669 75 aa2.68□□□□□ -1.98
ATXN3-224ENST00000554040 PDE6GP18545 87 aa2.68□□□□□ -1.98
ATXN3-224ENST00000554040 MT4P47944 62 aa2.68□□□□□ -1.98
ATXN3-224ENST00000554040 PSMB2P49721 201 aa2.68□□□□□ -1.98
ATXN3-224ENST00000554040 NREPQ16612 68 aa2.68□□□□□ -1.98
ATXN3-224ENST00000554040 HCG22E2RYF7 251 aa2.67□□□□□ -1.98
ATXN3-224ENST00000554040 H0YAA0 97 aa2.67□□□□□ -1.98
ATXN3-224ENST00000554040 BAALC-AS2P0C853 105 aa2.66□□□□□ -1.98
ATXN3-224ENST00000554040 FXYD2P54710 66 aa2.66□□□□□ -1.98
ATXN3-224ENST00000554040 CAMK2N1Q7Z7J9 78 aa2.66□□□□□ -1.98
ATXN3-224ENST00000554040 LOC110117498A0A087WWA1 95 aa2.65□□□□□ -1.99
ATXN3-224ENST00000554040 SMIM26A0A096LP01 95 aa2.65□□□□□ -1.99
ATXN3-224ENST00000554040 C14orf144Q96I85 54 aa2.65□□□□□ -1.99
ATXN3-224ENST00000554040 A0A087WVE0 104 aa2.64□□□□□ -1.99
ATXN3-224ENST00000554040 HIST1H2BLQ99880 126 aa2.64□□□□□ -1.99
ATXN3-224ENST00000554040 JMJD7-PLA2G4BH0Y9G9 81 aa2.63□□□□□ -1.99
ATXN3-224ENST00000554040 ADM2Q7Z4H4 148 aa2.63□□□□□ -1.99
ATXN3-224ENST00000554040 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
ATXN3-224ENST00000554040 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
ATXN3-224ENST00000554040 CASC2Q6XLA1 102 aa2.62□□□□□ -1.99
ATXN3-224ENST00000554040 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
ATXN3-224ENST00000554040 K7ERJ3 54 aa2.61□□□□□ -1.99
ATXN3-224ENST00000554040 SCGB1C2P0DMR2 95 aa2.61□□□□□ -1.99
ATXN3-224ENST00000554040 S100A2P29034 98 aa2.61□□□□□ -1.99
ATXN3-224ENST00000554040 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
ATXN3-224ENST00000554040 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
ATXN3-224ENST00000554040 BPY2O14599 106 aa2.59□□□□□ -1.99
ATXN3-224ENST00000554040 NDUFC1O43677 76 aa2.58□□□□□ -2
ATXN3-224ENST00000554040 C14orf132Q9NPU4 83 aa2.58□□□□□ -2
ATXN3-224ENST00000554040 R4GN34 69 aa2.58□□□□□ -2
ATXN3-224ENST00000554040 SPATA45Q537H7 98 aa2.57□□□□□ -2
ATXN3-224ENST00000554040 Q8N9L7 120 aa2.57□□□□□ -2
ATXN3-224ENST00000554040 CYSTM1Q9H1C7 97 aa2.57□□□□□ -2
ATXN3-224ENST00000554040 KRTAP19-7Q3SYF9 63 aa2.56□□□□□ -2
ATXN3-224ENST00000554040 MT1EP04732 61 aa2.55□□□□□ -2
ATXN3-224ENST00000554040 M0QZ58 72 aa2.54□□□□□ -2
ATXN3-224ENST00000554040 HSD52Q0P140 79 aa2.54□□□□□ -2
ATXN3-224ENST00000554040 ATXN8Q156A1 80 aa2.53□□□□□ -2
ATXN3-224ENST00000554040 PP632Q6XCG6 107 aa2.53□□□□□ -2
ATXN3-224ENST00000554040 VAMP8Q9BV40 100 aa2.53□□□□□ -2
ATXN3-224ENST00000554040 CYP4F30PQ9H0H9 118 aa2.53□□□□□ -2
ATXN3-224ENST00000554040 P0C880 135 aa2.52□□□□□ -2.01
ATXN3-224ENST00000554040 LINC01554Q52M75 96 aa2.52□□□□□ -2.01
ATXN3-224ENST00000554040 MT1GP13640 62 aa2.5□□□□□ -2.01
ATXN3-224ENST00000554040 TP53AIP1Q9HCN2 124 aa2.5□□□□□ -2.01
ATXN3-224ENST00000554040 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
ATXN3-224ENST00000554040 C20orf197Q8N268 126 aa2.49□□□□□ -2.01
ATXN3-224ENST00000554040 NAA38Q9BRA0 125 aaKnown RBP2.49□□□□□ -2.01
ATXN3-224ENST00000554040 K7EP34 96 aa2.48□□□□□ -2.01
ATXN3-224ENST00000554040 S100A1P23297 94 aa2.47□□□□□ -2.01
ATXN3-224ENST00000554040 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
ATXN3-224ENST00000554040 MP68P56378 58 aa2.46□□□□□ -2.02
ATXN3-224ENST00000554040 SPANXA2-OT1Q8N9U9 137 aa2.46□□□□□ -2.02
ATXN3-224ENST00000554040 ACYP1P07311 99 aa2.45□□□□□ -2.02
ATXN3-224ENST00000554040 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
ATXN3-224ENST00000554040 MT1MQ8N339 61 aa2.44□□□□□ -2.02
ATXN3-224ENST00000554040 TRAV22A0A0B4J277 110 aa2.43□□□□□ -2.02
ATXN3-224ENST00000554040 LOC101927531A0A1B0GV80 90 aa2.43□□□□□ -2.02
ATXN3-224ENST00000554040 BATFQ16520 125 aa2.43□□□□□ -2.02
ATXN3-224ENST00000554040 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
ATXN3-224ENST00000554040 ANAPC13Q9BS18 74 aa2.41□□□□□ -2.02
ATXN3-224ENST00000554040 MT-ATP8P03928 68 aa2.39□□□□□ -2.03
ATXN3-224ENST00000554040 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
ATXN3-224ENST00000554040 UQCR10Q9UDW1 63 aa2.39□□□□□ -2.03
ATXN3-224ENST00000554040 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms