RNA–Protein interactions for RNA: ENST00000553817.1

KLHL28-203, Transcript of kelch like family member 28, humanhuman

TSL 4

Gene KLHL28, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-203ENST00000553817 RELNP78509 3460 aa1.49□□□□□ -2.17
KLHL28-203ENST00000553817 LAMA5O15230 3695 aa1.49□□□□□ -2.17
KLHL28-203ENST00000553817 SETD2Q9BYW2 2564 aaPredicted RBP1.49□□□□□ -2.17
KLHL28-203ENST00000553817 FASNP49327 2511 aaKnown RBP1.49□□□□□ -2.17
KLHL28-203ENST00000553817 R4GN34 69 aa1.48□□□□□ -2.17
KLHL28-203ENST00000553817 SVEP1Q4LDE5 3571 aa1.48□□□□□ -2.17
KLHL28-203ENST00000553817 TGP01266 2768 aa1.47□□□□□ -2.17
KLHL28-203ENST00000553817 DNAH1Q9P2D7 4330 aa1.47□□□□□ -2.17
KLHL28-203ENST00000553817 FBN1P35555 2871 aaKnown RBP1.47□□□□□ -2.17
KLHL28-203ENST00000553817 PDZD2O15018 2839 aa1.47□□□□□ -2.17
KLHL28-203ENST00000553817 A0A0D9SG42 100 aa1.47□□□□□ -2.17
KLHL28-203ENST00000553817 KRTAP12-1P59990 96 aa1.47□□□□□ -2.17
KLHL28-203ENST00000553817 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
KLHL28-203ENST00000553817 COL6A5A8TX70 2615 aa1.47□□□□□ -2.17
KLHL28-203ENST00000553817 PKD1L1Q8TDX9 2849 aa1.47□□□□□ -2.17
KLHL28-203ENST00000553817 ATRQ13535 2644 aa1.46□□□□□ -2.18
KLHL28-203ENST00000553817 FAM208BQ5VWN6 2430 aa1.46□□□□□ -2.18
KLHL28-203ENST00000553817 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
KLHL28-203ENST00000553817 ITPR2Q14571 2701 aa1.46□□□□□ -2.18
KLHL28-203ENST00000553817 POLQO75417 2590 aa1.46□□□□□ -2.18
KLHL28-203ENST00000553817 MYO18BQ8IUG5 2567 aa1.46□□□□□ -2.18
KLHL28-203ENST00000553817 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
KLHL28-203ENST00000553817 KRTAP6-3Q3LI67 103 aa1.45□□□□□ -2.18
KLHL28-203ENST00000553817 VPS13CQ709C8 3753 aa1.45□□□□□ -2.18
KLHL28-203ENST00000553817 FLNCQ14315 2725 aa1.45□□□□□ -2.18
KLHL28-203ENST00000553817 CACNA1AO00555 2505 aa1.44□□□□□ -2.18
KLHL28-203ENST00000553817 KRTAP13-4Q3LI77 160 aa1.44□□□□□ -2.18
KLHL28-203ENST00000553817 ANK3Q12955 4377 aaKnown RBP1.44□□□□□ -2.18
KLHL28-203ENST00000553817 FLNAP21333 2647 aaKnown RBP1.44□□□□□ -2.18
KLHL28-203ENST00000553817 TEP1Q99973 2627 aaKnown RBP1.44□□□□□ -2.18
KLHL28-203ENST00000553817 Q5VSD8 79 aa1.43□□□□□ -2.18
KLHL28-203ENST00000553817 VPS13DQ5THJ4 4388 aa1.43□□□□□ -2.18
KLHL28-203ENST00000553817 MUC3AQ02505 3323 aa1.42□□□□□ -2.18
KLHL28-203ENST00000553817 COL7A1Q02388 2944 aa1.42□□□□□ -2.18
KLHL28-203ENST00000553817 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
KLHL28-203ENST00000553817 CSMD2Q7Z408 3487 aa1.42□□□□□ -2.18
KLHL28-203ENST00000553817 TRRAPQ9Y4A5 3859 aa1.41□□□□□ -2.18
KLHL28-203ENST00000553817 FRAS1Q86XX4 4008 aa1.4□□□□□ -2.18
KLHL28-203ENST00000553817 NOTCH1P46531 2555 aa1.4□□□□□ -2.19
KLHL28-203ENST00000553817 MAST4O15021 2626 aa1.4□□□□□ -2.19
KLHL28-203ENST00000553817 DNAH8Q96JB1 4490 aa1.4□□□□□ -2.19
KLHL28-203ENST00000553817 DNAH3Q8TD57 4116 aa1.39□□□□□ -2.19
KLHL28-203ENST00000553817 USP24Q9UPU5 2620 aa1.39□□□□□ -2.19
KLHL28-203ENST00000553817 LYSTQ99698 3801 aa1.39□□□□□ -2.19
KLHL28-203ENST00000553817 DMBT1Q9UGM3 2413 aaPredicted RBP1.39□□□□□ -2.19
KLHL28-203ENST00000553817 TENM3Q9P273 2699 aa1.39□□□□□ -2.19
KLHL28-203ENST00000553817 DYNC2H1Q8NCM8 4307 aaKnown RBP1.38□□□□□ -2.19
KLHL28-203ENST00000553817 STAB2Q8WWQ8 2551 aa1.38□□□□□ -2.19
KLHL28-203ENST00000553817 FLNBO75369 2602 aaKnown RBP1.37□□□□□ -2.19
KLHL28-203ENST00000553817 DNAH6Q9C0G6 4158 aa1.37□□□□□ -2.19
KLHL28-203ENST00000553817 ANK2Q01484 3957 aa1.37□□□□□ -2.19
KLHL28-203ENST00000553817 NSD1Q96L73 2696 aaPredicted RBP1.37□□□□□ -2.19
KLHL28-203ENST00000553817 SMR3AQ99954 134 aa1.37□□□□□ -2.19
KLHL28-203ENST00000553817 IGSF10Q6WRI0 2623 aa1.37□□□□□ -2.19
KLHL28-203ENST00000553817 DNAH17Q9UFH2 4485 aa1.36□□□□□ -2.19
KLHL28-203ENST00000553817 TENM1Q9UKZ4 2725 aa1.36□□□□□ -2.19
KLHL28-203ENST00000553817 C9orf92A6NGG3 77 aa1.36□□□□□ -2.19
KLHL28-203ENST00000553817 TNP1P09430 55 aa1.36□□□□□ -2.19
KLHL28-203ENST00000553817 PRKDCP78527 4128 aaKnown RBP1.36□□□□□ -2.19
KLHL28-203ENST00000553817 STAB1Q9NY15 2570 aa1.36□□□□□ -2.19
KLHL28-203ENST00000553817 FBN3Q75N90 2809 aa1.35□□□□□ -2.19
KLHL28-203ENST00000553817 MGAM2Q2M2H8 2515 aa1.35□□□□□ -2.19
KLHL28-203ENST00000553817 DNAH2Q9P225 4427 aa1.35□□□□□ -2.19
KLHL28-203ENST00000553817 DNAH9Q9NYC9 4486 aa1.35□□□□□ -2.19
KLHL28-203ENST00000553817 HECTD4Q9Y4D8 3996 aa1.35□□□□□ -2.19
KLHL28-203ENST00000553817 DNAH7Q8WXX0 4024 aa1.35□□□□□ -2.19
KLHL28-203ENST00000553817 CMYA5Q8N3K9 4069 aa1.35□□□□□ -2.19
KLHL28-203ENST00000553817 DNAH10Q8IVF4 4471 aa1.35□□□□□ -2.19
KLHL28-203ENST00000553817 CSMD3Q7Z407 3707 aa1.33□□□□□ -2.2
KLHL28-203ENST00000553817 DNAH11Q96DT5 4516 aa1.32□□□□□ -2.2
KLHL28-203ENST00000553817 HUWE1Q7Z6Z7 4374 aaKnown RBP1.31□□□□□ -2.2
KLHL28-203ENST00000553817 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
KLHL28-203ENST00000553817 CUBNO60494 3623 aa1.31□□□□□ -2.2
KLHL28-203ENST00000553817 J3QKU1 62 aa1.29□□□□□ -2.2
KLHL28-203ENST00000553817 SACSQ9NZJ4 4579 aa1.27□□□□□ -2.21
KLHL28-203ENST00000553817 ZNF469Q96JG9 3925 aaPredicted RBP1.26□□□□□ -2.21
KLHL28-203ENST00000553817 KMT2AQ03164 3969 aa1.25□□□□□ -2.21
KLHL28-203ENST00000553817 PKD1P98161 4303 aa1.24□□□□□ -2.21
KLHL28-203ENST00000553817 PKHD1L1Q86WI1 4243 aa1.24□□□□□ -2.21
KLHL28-203ENST00000553817 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
KLHL28-203ENST00000553817 PLECQ15149 4684 aaKnown RBP1.24□□□□□ -2.21
KLHL28-203ENST00000553817 MYCBP2O75592 4640 aa1.24□□□□□ -2.21
KLHL28-203ENST00000553817 LRP1BQ9NZR2 4599 aa1.22□□□□□ -2.21
KLHL28-203ENST00000553817 VPS13BQ7Z7G8 4022 aa1.22□□□□□ -2.21
KLHL28-203ENST00000553817 FLGP20930 4061 aaPredicted RBP1.22□□□□□ -2.21
KLHL28-203ENST00000553817 LRP1Q07954 4544 aaKnown RBP1.21□□□□□ -2.22
KLHL28-203ENST00000553817 PKHD1P08F94 4074 aa1.21□□□□□ -2.22
KLHL28-203ENST00000553817 DNAH5Q8TE73 4624 aa1.21□□□□□ -2.22
KLHL28-203ENST00000553817 APOBP04114 4563 aaKnown RBP1.21□□□□□ -2.22
KLHL28-203ENST00000553817 DYNC1H1Q14204 4646 aaKnown RBP1.2□□□□□ -2.22
KLHL28-203ENST00000553817 KRTAP8-1Q8IUC2 63 aa1.2□□□□□ -2.22
KLHL28-203ENST00000553817 TNXBP22105 4242 aa1.2□□□□□ -2.22
KLHL28-203ENST00000553817 STARD9Q9P2P6 4700 aa1.19□□□□□ -2.22
KLHL28-203ENST00000553817 HSPG2P98160 4391 aa1.19□□□□□ -2.22
KLHL28-203ENST00000553817 KRTAP10-4P60372 401 aaPredicted RBP1.19□□□□□ -2.22
KLHL28-203ENST00000553817 FAT2Q9NYQ8 4349 aa1.19□□□□□ -2.22
KLHL28-203ENST00000553817 FAT3Q8TDW7 4589 aa1.16□□□□□ -2.22
KLHL28-203ENST00000553817 FAT1Q14517 4588 aa1.13□□□□□ -2.23
KLHL28-203ENST00000553817 KRTAP21-3Q3LHN1 58 aa1.13□□□□□ -2.23
KLHL28-203ENST00000553817 SMR3BP02814 79 aaPredicted RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms