RNA–Protein interactions for RNA: ENST00000552599.5

CNOT2-240, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-240ENST00000552599 K7EQZ3 153 aa4.27□□□□□ -1.73
CNOT2-240ENST00000552599 SPINK7P58062 85 aa4.27□□□□□ -1.73
CNOT2-240ENST00000552599 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
CNOT2-240ENST00000552599 RPL37AP61513 92 aaKnown RBP4.26□□□□□ -1.73
CNOT2-240ENST00000552599 LINC00472Q9H8W2 130 aa4.25□□□□□ -1.73
CNOT2-240ENST00000552599 SMR3BP02814 79 aaPredicted RBP4.23□□□□□ -1.73
CNOT2-240ENST00000552599 Q96NJ1 140 aa4.23□□□□□ -1.73
CNOT2-240ENST00000552599 KRTAP13-2Q52LG2 175 aa4.22□□□□□ -1.73
CNOT2-240ENST00000552599 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
CNOT2-240ENST00000552599 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
CNOT2-240ENST00000552599 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.73
CNOT2-240ENST00000552599 R4GN34 69 aa4.21□□□□□ -1.73
CNOT2-240ENST00000552599 WFDC13Q8IUB5 93 aa4.2□□□□□ -1.74
CNOT2-240ENST00000552599 LINC00208Q96KT6 92 aa4.2□□□□□ -1.74
CNOT2-240ENST00000552599 SSBP3-AS1Q7Z2R9 100 aa4.19□□□□□ -1.74
CNOT2-240ENST00000552599 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
CNOT2-240ENST00000552599 HSPG2P98160 4391 aa4.18□□□□□ -1.74
CNOT2-240ENST00000552599 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
CNOT2-240ENST00000552599 KRTAP29-1A8MX34 341 aaPredicted RBP4.17□□□□□ -1.74
CNOT2-240ENST00000552599 SPINK6Q6UWN8 80 aa4.17□□□□□ -1.74
CNOT2-240ENST00000552599 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
CNOT2-240ENST00000552599 MMP24-AS1A0A0U1RRL7 71 aa4.16□□□□□ -1.74
CNOT2-240ENST00000552599 RYR1P21817 5038 aa4.16□□□□□ -1.74
CNOT2-240ENST00000552599 H0Y9P7 68 aa4.15□□□□□ -1.75
CNOT2-240ENST00000552599 NDUFB1O75438 58 aa4.15□□□□□ -1.75
CNOT2-240ENST00000552599 PKHD1L1Q86WI1 4243 aa4.14□□□□□ -1.75
CNOT2-240ENST00000552599 KIAA1109Q2LD37 5005 aa4.13□□□□□ -1.75
CNOT2-240ENST00000552599 LRP1Q07954 4544 aaKnown RBP4.12□□□□□ -1.75
CNOT2-240ENST00000552599 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
CNOT2-240ENST00000552599 UQCR11O14957 56 aa4.12□□□□□ -1.75
CNOT2-240ENST00000552599 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
CNOT2-240ENST00000552599 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
CNOT2-240ENST00000552599 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
CNOT2-240ENST00000552599 FLG2Q5D862 2391 aaPredicted RBP4.1□□□□□ -1.75
CNOT2-240ENST00000552599 ZCCHC13Q8WW36 166 aaKnown RBP4.1□□□□□ -1.75
CNOT2-240ENST00000552599 SPINK1P00995 79 aa4.07□□□□□ -1.76
CNOT2-240ENST00000552599 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
CNOT2-240ENST00000552599 MRPL34Q9BQ48 92 aaKnown RBP4.07□□□□□ -1.76
CNOT2-240ENST00000552599 TNXBP22105 4242 aa4.07□□□□□ -1.76
CNOT2-240ENST00000552599 Q5VSD8 79 aa4.07□□□□□ -1.76
CNOT2-240ENST00000552599 MYCBP2O75592 4640 aa4.07□□□□□ -1.76
CNOT2-240ENST00000552599 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
CNOT2-240ENST00000552599 HRES1P13985 223 aa4.05□□□□□ -1.76
CNOT2-240ENST00000552599 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
CNOT2-240ENST00000552599 DMBT1Q9UGM3 2413 aaPredicted RBP4.03□□□□□ -1.76
CNOT2-240ENST00000552599 TP53AIP1Q9HCN2 124 aa4.03□□□□□ -1.76
CNOT2-240ENST00000552599 RPS29P62273 56 aaKnown RBP4.03□□□□□ -1.76
CNOT2-240ENST00000552599 COA5Q86WW8 74 aa4.02□□□□□ -1.77
CNOT2-240ENST00000552599 IGKV2D-30A0A075B6S6 120 aa4.01□□□□□ -1.77
CNOT2-240ENST00000552599 KRTAP13-3Q3SY46 172 aa4□□□□□ -1.77
CNOT2-240ENST00000552599 KRTAP10-8P60410 259 aa3.98□□□□□ -1.77
CNOT2-240ENST00000552599 PCOTHQ58A44 107 aa3.98□□□□□ -1.77
CNOT2-240ENST00000552599 C9orf92A6NGG3 77 aa3.97□□□□□ -1.77
CNOT2-240ENST00000552599 A0A1B0GU69 56 aa3.96□□□□□ -1.78
CNOT2-240ENST00000552599 MT1HL1P0DM35 61 aa3.94□□□□□ -1.78
CNOT2-240ENST00000552599 ABCA13Q86UQ4 5058 aa3.93□□□□□ -1.78
CNOT2-240ENST00000552599 ACYP2P14621 99 aa3.92□□□□□ -1.78
CNOT2-240ENST00000552599 BIRC6Q9NR09 4857 aa3.91□□□□□ -1.78
CNOT2-240ENST00000552599 HERC2O95714 4834 aa3.9□□□□□ -1.79
CNOT2-240ENST00000552599 LRP2P98164 4655 aa3.83□□□□□ -1.8
CNOT2-240ENST00000552599 LPAP08519 4548 aa3.82□□□□□ -1.8
CNOT2-240ENST00000552599 RPL37P61927 97 aaKnown RBP3.8□□□□□ -1.8
CNOT2-240ENST00000552599 CRIPTQ9P021 101 aa3.79□□□□□ -1.8
CNOT2-240ENST00000552599 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
CNOT2-240ENST00000552599 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
CNOT2-240ENST00000552599 HERC1Q15751 4861 aa3.73□□□□□ -1.81
CNOT2-240ENST00000552599 INE1O15225 51 aa3.71□□□□□ -1.82
CNOT2-240ENST00000552599 COX6B2Q6YFQ2 88 aa3.7□□□□□ -1.82
CNOT2-240ENST00000552599 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
CNOT2-240ENST00000552599 HMCN2Q8NDA2 5059 aa3.66□□□□□ -1.82
CNOT2-240ENST00000552599 MUC17Q685J3 4493 aa3.64□□□□□ -1.83
CNOT2-240ENST00000552599 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
CNOT2-240ENST00000552599 MUC2Q02817 5179 aa3.59□□□□□ -1.83
CNOT2-240ENST00000552599 S4R3F8 94 aa3.59□□□□□ -1.84
CNOT2-240ENST00000552599 H1FX-AS1Q4G0G2 97 aa3.58□□□□□ -1.84
CNOT2-240ENST00000552599 KRTAP19-2Q3LHN2 52 aa3.51□□□□□ -1.85
CNOT2-240ENST00000552599 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
CNOT2-240ENST00000552599 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
CNOT2-240ENST00000552599 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
CNOT2-240ENST00000552599 H0YAA0 97 aa3.49□□□□□ -1.85
CNOT2-240ENST00000552599 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
CNOT2-240ENST00000552599 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
CNOT2-240ENST00000552599 MT3P25713 68 aa3.47□□□□□ -1.85
CNOT2-240ENST00000552599 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
CNOT2-240ENST00000552599 FAT4Q6V0I7 4981 aa3.45□□□□□ -1.86
CNOT2-240ENST00000552599 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
CNOT2-240ENST00000552599 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
CNOT2-240ENST00000552599 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
CNOT2-240ENST00000552599 A0A0D9SG42 100 aa3.38□□□□□ -1.87
CNOT2-240ENST00000552599 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CNOT2-240ENST00000552599 M0QZ58 72 aa3.32□□□□□ -1.88
CNOT2-240ENST00000552599 MT1HP80294 61 aa3.31□□□□□ -1.88
CNOT2-240ENST00000552599 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
CNOT2-240ENST00000552599 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
CNOT2-240ENST00000552599 M0R2T5 61 aa3.27□□□□□ -1.89
CNOT2-240ENST00000552599 MT2AP02795 61 aa3.2□□□□□ -1.9
CNOT2-240ENST00000552599 MT1FP04733 61 aa3.2□□□□□ -1.9
CNOT2-240ENST00000552599 KRTAP10-10P60014 251 aa3.17□□□□□ -1.9
CNOT2-240ENST00000552599 SPRR2GQ9BYE4 73 aa3.15□□□□□ -1.9
CNOT2-240ENST00000552599 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms