RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PMAIP1Q13794 54 aa0.93□□□□□ -2.26
CPSF6-207ENST00000551516 KTN1-AS1Q86SY8 53 aa0.93□□□□□ -2.26
CPSF6-207ENST00000551516 SVBPQ8N300 66 aa0.93□□□□□ -2.26
CPSF6-207ENST00000551516 RAB37Q96AX2 223 aa0.93□□□□□ -2.26
CPSF6-207ENST00000551516 HSPB8Q9UJY1 196 aa0.93□□□□□ -2.26
CPSF6-207ENST00000551516 IGKV3D-7A0A0C4DH55 119 aa0.92□□□□□ -2.26
CPSF6-207ENST00000551516 H3BT86 120 aa0.92□□□□□ -2.26
CPSF6-207ENST00000551516 APOC3P02656 99 aa0.92□□□□□ -2.26
CPSF6-207ENST00000551516 SPRR2DP22532 72 aa0.92□□□□□ -2.26
CPSF6-207ENST00000551516 KRTAP19-7Q3SYF9 63 aa0.92□□□□□ -2.26
CPSF6-207ENST00000551516 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
CPSF6-207ENST00000551516 WFDC13Q8IUB5 93 aa0.92□□□□□ -2.26
CPSF6-207ENST00000551516 TRAV7A0A075B6U4 112 aa0.91□□□□□ -2.26
CPSF6-207ENST00000551516 A0A087WVE0 104 aa0.91□□□□□ -2.26
CPSF6-207ENST00000551516 A0A1B0GX51 115 aa0.91□□□□□ -2.26
CPSF6-207ENST00000551516 H3BMG7 143 aa0.91□□□□□ -2.26
CPSF6-207ENST00000551516 KLKP1Q107X0 134 aa0.91□□□□□ -2.26
CPSF6-207ENST00000551516 NHP2Q9NX24 153 aaKnown RBP0.91□□□□□ -2.26
CPSF6-207ENST00000551516 MMP24-AS1A0A0U1RRL7 71 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 FAM236DA0A1B0GTK5 79 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 DLEU1O43261 78 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 FAM236CP0DP71 79 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 KRTAP12-4P60329 112 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 NDUFA5Q16718 116 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 Q6ZQT0 140 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 KRTAP8-1Q8IUC2 63 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 ATOH7Q8N100 152 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 ANKRD29Q8N6D5 301 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 SS18L2Q9UHA2 77 aa0.9□□□□□ -2.27
CPSF6-207ENST00000551516 F8WEM9 126 aa0.89□□□□□ -2.27
CPSF6-207ENST00000551516 KRTAP12-1P59990 96 aa0.89□□□□□ -2.27
CPSF6-207ENST00000551516 BVES-AS1Q5T3Y7 98 aa0.89□□□□□ -2.27
CPSF6-207ENST00000551516 LCA10Q71F78 164 aa0.89□□□□□ -2.27
CPSF6-207ENST00000551516 HIST1H2BLQ99880 126 aa0.89□□□□□ -2.27
CPSF6-207ENST00000551516 SNHG12Q9BXW3 62 aa0.89□□□□□ -2.27
CPSF6-207ENST00000551516 H0YAA0 97 aa0.88□□□□□ -2.27
CPSF6-207ENST00000551516 H0YGX0 51 aa0.88□□□□□ -2.27
CPSF6-207ENST00000551516 COX8AP10176 69 aa0.88□□□□□ -2.27
CPSF6-207ENST00000551516 KRTAP13-4Q3LI77 160 aa0.88□□□□□ -2.27
CPSF6-207ENST00000551516 PRR15Q8IV56 129 aa0.88□□□□□ -2.27
CPSF6-207ENST00000551516 HIST3H2BBQ8N257 126 aa0.88□□□□□ -2.27
CPSF6-207ENST00000551516 C12orf57Q99622 126 aa0.88□□□□□ -2.27
CPSF6-207ENST00000551516 HIGD1BQ9P298 99 aa0.88□□□□□ -2.27
CPSF6-207ENST00000551516 MT1EP04732 61 aa0.87□□□□□ -2.27
CPSF6-207ENST00000551516 CCKP06307 115 aa0.87□□□□□ -2.27
CPSF6-207ENST00000551516 FXYD2P54710 66 aa0.87□□□□□ -2.27
CPSF6-207ENST00000551516 C7orf65Q6ZTY9 151 aa0.87□□□□□ -2.27
CPSF6-207ENST00000551516 COA5Q86WW8 74 aa0.87□□□□□ -2.27
CPSF6-207ENST00000551516 COPS9Q8WXC6 57 aa0.87□□□□□ -2.27
CPSF6-207ENST00000551516 SIGMAR1Q99720 223 aa0.87□□□□□ -2.27
CPSF6-207ENST00000551516 KRTDAPP60985 99 aa0.86□□□□□ -2.27
CPSF6-207ENST00000551516 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
CPSF6-207ENST00000551516 TMEM254Q8TBM7 123 aa0.86□□□□□ -2.27
CPSF6-207ENST00000551516 CRIPTQ9P021 101 aa0.86□□□□□ -2.27
CPSF6-207ENST00000551516 MUC5BQ9HC84 5762 aaPredicted RBP0.86□□□□□ -2.27
CPSF6-207ENST00000551516 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
CPSF6-207ENST00000551516 LOC110117498A0A087WWA1 95 aa0.85□□□□□ -2.27
CPSF6-207ENST00000551516 J3KT08 172 aa0.85□□□□□ -2.27
CPSF6-207ENST00000551516 K7EQZ3 153 aa0.85□□□□□ -2.27
CPSF6-207ENST00000551516 RBM3P98179 157 aaKnown RBP0.85□□□□□ -2.27
CPSF6-207ENST00000551516 MRPL34Q9BQ48 92 aaKnown RBP0.85□□□□□ -2.27
CPSF6-207ENST00000551516 NAA38Q9BRA0 125 aaKnown RBP0.85□□□□□ -2.27
CPSF6-207ENST00000551516 PRO1854Q9UHT4 67 aa0.85□□□□□ -2.27
CPSF6-207ENST00000551516 TMEM256-PLSCR3K7ERE1 68 aa0.84□□□□□ -2.27
CPSF6-207ENST00000551516 K7ERJ3 54 aa0.84□□□□□ -2.27
CPSF6-207ENST00000551516 TRACP01848 142 aa0.84□□□□□ -2.27
CPSF6-207ENST00000551516 FABP2P12104 132 aa0.84□□□□□ -2.27
CPSF6-207ENST00000551516 CSAG1Q6PB30 78 aa0.84□□□□□ -2.27
CPSF6-207ENST00000551516 C14orf144Q96I85 54 aa0.84□□□□□ -2.27
CPSF6-207ENST00000551516 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.28
CPSF6-207ENST00000551516 MUC5ACP98088 5654 aa0.83□□□□□ -2.28
CPSF6-207ENST00000551516 hDV103S1A0JD37 113 aa0.83□□□□□ -2.28
CPSF6-207ENST00000551516 ORMDL1Q9P0S3 153 aa0.83□□□□□ -2.28
CPSF6-207ENST00000551516 MT1GP13640 62 aa0.82□□□□□ -2.28
CPSF6-207ENST00000551516 Q1T7F1 81 aa0.82□□□□□ -2.28
CPSF6-207ENST00000551516 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
CPSF6-207ENST00000551516 MT1MQ8N339 61 aa0.82□□□□□ -2.28
CPSF6-207ENST00000551516 S4R3F8 94 aa0.82□□□□□ -2.28
CPSF6-207ENST00000551516 A0A1B0GV72 72 aa0.81□□□□□ -2.28
CPSF6-207ENST00000551516 BAALC-AS2P0C853 105 aa0.81□□□□□ -2.28
CPSF6-207ENST00000551516 MT4P47944 62 aa0.81□□□□□ -2.28
CPSF6-207ENST00000551516 PYY3Q5JQD4 70 aa0.81□□□□□ -2.28
CPSF6-207ENST00000551516 LYRM7Q5U5X0 104 aa0.81□□□□□ -2.28
CPSF6-207ENST00000551516 MT1LQ93083 61 aa0.81□□□□□ -2.28
CPSF6-207ENST00000551516 C9JAW5 83 aa0.8□□□□□ -2.28
CPSF6-207ENST00000551516 LINC01554Q52M75 96 aa0.8□□□□□ -2.28
CPSF6-207ENST00000551516 CYP4F30PQ9H0H9 118 aa0.8□□□□□ -2.28
CPSF6-207ENST00000551516 CYSTM1Q9H1C7 97 aa0.8□□□□□ -2.28
CPSF6-207ENST00000551516 FAM236AA0A1B0GUQ0 79 aa0.79□□□□□ -2.28
CPSF6-207ENST00000551516 FAM236BA0A1B0GV22 79 aa0.79□□□□□ -2.28
CPSF6-207ENST00000551516 NDUFB1O75438 58 aa0.79□□□□□ -2.28
CPSF6-207ENST00000551516 KRTAP19-5Q3LI72 72 aa0.79□□□□□ -2.28
CPSF6-207ENST00000551516 SPATA45Q537H7 98 aa0.79□□□□□ -2.28
CPSF6-207ENST00000551516 DSCR8Q96T75 97 aa0.79□□□□□ -2.28
CPSF6-207ENST00000551516 IMUPQ9GZP8 106 aa0.79□□□□□ -2.28
CPSF6-207ENST00000551516 C14orf132Q9NPU4 83 aa0.79□□□□□ -2.28
CPSF6-207ENST00000551516 HCG22E2RYF7 251 aa0.78□□□□□ -2.28
CPSF6-207ENST00000551516 JMJD7-PLA2G4BH0Y9G9 81 aa0.78□□□□□ -2.28
CPSF6-207ENST00000551516 PDE6GP18545 87 aa0.78□□□□□ -2.28
CPSF6-207ENST00000551516 HSD52Q0P140 79 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms