RNA–Protein interactions for RNA: ENST00000551465.1

R3HDM2-213, Transcript of R3H domain containing 2, humanhuman

TSL 2

Gene R3HDM2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-213ENST00000551465 TRRAPQ9Y4A5 3859 aa2.64□□□□□ -1.99
R3HDM2-213ENST00000551465 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
R3HDM2-213ENST00000551465 SMR3AQ99954 134 aa2.64□□□□□ -1.99
R3HDM2-213ENST00000551465 VPS13CQ709C8 3753 aa2.63□□□□□ -1.99
R3HDM2-213ENST00000551465 HIVEP1P15822 2718 aa2.63□□□□□ -1.99
R3HDM2-213ENST00000551465 CFAP46Q8IYW2 2715 aa2.62□□□□□ -1.99
R3HDM2-213ENST00000551465 FASNP49327 2511 aaKnown RBP2.62□□□□□ -1.99
R3HDM2-213ENST00000551465 TNP1P09430 55 aa2.62□□□□□ -1.99
R3HDM2-213ENST00000551465 ABCA12Q86UK0 2595 aa2.62□□□□□ -1.99
R3HDM2-213ENST00000551465 DMBT1Q9UGM3 2413 aaPredicted RBP2.62□□□□□ -1.99
R3HDM2-213ENST00000551465 EYSQ5T1H1 3165 aa2.62□□□□□ -1.99
R3HDM2-213ENST00000551465 ACACBO00763 2458 aa2.62□□□□□ -1.99
R3HDM2-213ENST00000551465 DYNC2H1Q8NCM8 4307 aaKnown RBP2.61□□□□□ -1.99
R3HDM2-213ENST00000551465 C9orf92A6NGG3 77 aa2.61□□□□□ -1.99
R3HDM2-213ENST00000551465 SETD2Q9BYW2 2564 aaPredicted RBP2.61□□□□□ -1.99
R3HDM2-213ENST00000551465 ANK2Q01484 3957 aa2.6□□□□□ -1.99
R3HDM2-213ENST00000551465 DNAH3Q8TD57 4116 aa2.6□□□□□ -1.99
R3HDM2-213ENST00000551465 DNAH11Q96DT5 4516 aa2.59□□□□□ -1.99
R3HDM2-213ENST00000551465 PDZD2O15018 2839 aa2.58□□□□□ -2
R3HDM2-213ENST00000551465 NBEAL1Q6ZS30 2694 aa2.57□□□□□ -2
R3HDM2-213ENST00000551465 CMYA5Q8N3K9 4069 aa2.57□□□□□ -2
R3HDM2-213ENST00000551465 DNAH17Q9UFH2 4485 aa2.57□□□□□ -2
R3HDM2-213ENST00000551465 LCE1CQ5T751 118 aa2.56□□□□□ -2
R3HDM2-213ENST00000551465 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
R3HDM2-213ENST00000551465 PRKDCP78527 4128 aaKnown RBP2.56□□□□□ -2
R3HDM2-213ENST00000551465 DNAH6Q9C0G6 4158 aa2.56□□□□□ -2
R3HDM2-213ENST00000551465 DNAH10Q8IVF4 4471 aa2.56□□□□□ -2
R3HDM2-213ENST00000551465 STAB2Q8WWQ8 2551 aa2.55□□□□□ -2
R3HDM2-213ENST00000551465 FBN2P35556 2912 aa2.55□□□□□ -2
R3HDM2-213ENST00000551465 DNAH9Q9NYC9 4486 aa2.55□□□□□ -2
R3HDM2-213ENST00000551465 MUC3AQ02505 3323 aa2.54□□□□□ -2
R3HDM2-213ENST00000551465 LYSTQ99698 3801 aa2.54□□□□□ -2
R3HDM2-213ENST00000551465 CACNA1AO00555 2505 aa2.54□□□□□ -2
R3HDM2-213ENST00000551465 MYO18BQ8IUG5 2567 aa2.54□□□□□ -2
R3HDM2-213ENST00000551465 DNAH2Q9P225 4427 aa2.53□□□□□ -2
R3HDM2-213ENST00000551465 ZANQ9Y493 2812 aa2.53□□□□□ -2
R3HDM2-213ENST00000551465 DNAH7Q8WXX0 4024 aa2.53□□□□□ -2
R3HDM2-213ENST00000551465 HUWE1Q7Z6Z7 4374 aaKnown RBP2.53□□□□□ -2
R3HDM2-213ENST00000551465 BDP1A6H8Y1 2624 aa2.53□□□□□ -2.01
R3HDM2-213ENST00000551465 CSMD2Q7Z408 3487 aa2.52□□□□□ -2.01
R3HDM2-213ENST00000551465 KRTAP10-1P60331 282 aa2.52□□□□□ -2.01
R3HDM2-213ENST00000551465 ITPR2Q14571 2701 aa2.52□□□□□ -2.01
R3HDM2-213ENST00000551465 ITPR3Q14573 2671 aa2.52□□□□□ -2.01
R3HDM2-213ENST00000551465 COL7A1Q02388 2944 aa2.52□□□□□ -2.01
R3HDM2-213ENST00000551465 ZNF292O60281 2723 aa2.51□□□□□ -2.01
R3HDM2-213ENST00000551465 POLQO75417 2590 aa2.5□□□□□ -2.01
R3HDM2-213ENST00000551465 CSMD3Q7Z407 3707 aa2.5□□□□□ -2.01
R3HDM2-213ENST00000551465 ATRQ13535 2644 aa2.5□□□□□ -2.01
R3HDM2-213ENST00000551465 MYCBP2O75592 4640 aa2.49□□□□□ -2.01
R3HDM2-213ENST00000551465 CUBNO60494 3623 aa2.48□□□□□ -2.01
R3HDM2-213ENST00000551465 PKD1L1Q8TDX9 2849 aa2.46□□□□□ -2.01
R3HDM2-213ENST00000551465 SACSQ9NZJ4 4579 aa2.46□□□□□ -2.02
R3HDM2-213ENST00000551465 TENM3Q9P273 2699 aa2.45□□□□□ -2.02
R3HDM2-213ENST00000551465 FLNAP21333 2647 aaKnown RBP2.44□□□□□ -2.02
R3HDM2-213ENST00000551465 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
R3HDM2-213ENST00000551465 FBN3Q75N90 2809 aa2.43□□□□□ -2.02
R3HDM2-213ENST00000551465 HECTD4Q9Y4D8 3996 aa2.42□□□□□ -2.02
R3HDM2-213ENST00000551465 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
R3HDM2-213ENST00000551465 MAST4O15021 2626 aa2.42□□□□□ -2.02
R3HDM2-213ENST00000551465 TEP1Q99973 2627 aaKnown RBP2.42□□□□□ -2.02
R3HDM2-213ENST00000551465 NOTCH1P46531 2555 aa2.41□□□□□ -2.02
R3HDM2-213ENST00000551465 KRTAP10-10P60014 251 aa2.41□□□□□ -2.02
R3HDM2-213ENST00000551465 USP24Q9UPU5 2620 aa2.41□□□□□ -2.02
R3HDM2-213ENST00000551465 APOBP04114 4563 aaKnown RBP2.37□□□□□ -2.03
R3HDM2-213ENST00000551465 MGAM2Q2M2H8 2515 aa2.36□□□□□ -2.03
R3HDM2-213ENST00000551465 PKHD1L1Q86WI1 4243 aa2.36□□□□□ -2.03
R3HDM2-213ENST00000551465 FLNBO75369 2602 aaKnown RBP2.35□□□□□ -2.03
R3HDM2-213ENST00000551465 PKD1P98161 4303 aa2.34□□□□□ -2.04
R3HDM2-213ENST00000551465 NSD1Q96L73 2696 aaPredicted RBP2.34□□□□□ -2.04
R3HDM2-213ENST00000551465 STAB1Q9NY15 2570 aa2.33□□□□□ -2.04
R3HDM2-213ENST00000551465 KMT2AQ03164 3969 aa2.33□□□□□ -2.04
R3HDM2-213ENST00000551465 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
R3HDM2-213ENST00000551465 LRP1Q07954 4544 aaKnown RBP2.32□□□□□ -2.04
R3HDM2-213ENST00000551465 IGSF10Q6WRI0 2623 aa2.31□□□□□ -2.04
R3HDM2-213ENST00000551465 FLNCQ14315 2725 aa2.29□□□□□ -2.04
R3HDM2-213ENST00000551465 PLECQ15149 4684 aaKnown RBP2.29□□□□□ -2.04
R3HDM2-213ENST00000551465 HSPG2P98160 4391 aa2.29□□□□□ -2.04
R3HDM2-213ENST00000551465 DYNC1H1Q14204 4646 aaKnown RBP2.29□□□□□ -2.04
R3HDM2-213ENST00000551465 DNAH5Q8TE73 4624 aa2.28□□□□□ -2.04
R3HDM2-213ENST00000551465 FLGP20930 4061 aaPredicted RBP2.28□□□□□ -2.04
R3HDM2-213ENST00000551465 STARD9Q9P2P6 4700 aa2.26□□□□□ -2.05
R3HDM2-213ENST00000551465 PKHD1P08F94 4074 aa2.26□□□□□ -2.05
R3HDM2-213ENST00000551465 ZNF469Q96JG9 3925 aaPredicted RBP2.25□□□□□ -2.05
R3HDM2-213ENST00000551465 TENM1Q9UKZ4 2725 aa2.25□□□□□ -2.05
R3HDM2-213ENST00000551465 TNXBP22105 4242 aa2.25□□□□□ -2.05
R3HDM2-213ENST00000551465 FAT2Q9NYQ8 4349 aa2.24□□□□□ -2.05
R3HDM2-213ENST00000551465 LRP1BQ9NZR2 4599 aa2.24□□□□□ -2.05
R3HDM2-213ENST00000551465 J3QKU1 62 aa2.24□□□□□ -2.05
R3HDM2-213ENST00000551465 KRTAP10-4P60372 401 aaPredicted RBP2.23□□□□□ -2.05
R3HDM2-213ENST00000551465 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
R3HDM2-213ENST00000551465 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
R3HDM2-213ENST00000551465 M0R2T5 61 aa2.18□□□□□ -2.06
R3HDM2-213ENST00000551465 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
R3HDM2-213ENST00000551465 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
R3HDM2-213ENST00000551465 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
R3HDM2-213ENST00000551465 KRTAP2-1Q9BYU5 128 aa2.18□□□□□ -2.06
R3HDM2-213ENST00000551465 FAT1Q14517 4588 aa2.13□□□□□ -2.07
R3HDM2-213ENST00000551465 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
R3HDM2-213ENST00000551465 SMR3BP02814 79 aaPredicted RBP2.11□□□□□ -2.07
R3HDM2-213ENST00000551465 SPRR2GQ9BYE4 73 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms