RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
TMEM106C-216ENST00000551305 C1orf64Q8NEQ6 169 aa6.51□□□□□ -1.37
TMEM106C-216ENST00000551305 MDN1Q9NU22 5596 aa6.5□□□□□ -1.37
TMEM106C-216ENST00000551305 CXCL6P80162 114 aa6.5□□□□□ -1.37
TMEM106C-216ENST00000551305 KLKP1Q107X0 134 aa6.5□□□□□ -1.37
TMEM106C-216ENST00000551305 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
TMEM106C-216ENST00000551305 A0A1W2PPM0 123 aa6.47□□□□□ -1.37
TMEM106C-216ENST00000551305 IMUPQ9GZP8 106 aa6.44□□□□□ -1.38
TMEM106C-216ENST00000551305 H3BT86 120 aa6.44□□□□□ -1.38
TMEM106C-216ENST00000551305 KRTAP2-3P0C7H8 128 aa6.44□□□□□ -1.38
TMEM106C-216ENST00000551305 KRTAP2-4Q9BYR9 128 aa6.44□□□□□ -1.38
TMEM106C-216ENST00000551305 K7EP34 96 aa6.43□□□□□ -1.38
TMEM106C-216ENST00000551305 SPCS1Q9Y6A9 102 aa6.41□□□□□ -1.38
TMEM106C-216ENST00000551305 A0A087WVE0 104 aa6.36□□□□□ -1.39
TMEM106C-216ENST00000551305 GTF2H5Q6ZYL4 71 aa6.36□□□□□ -1.39
TMEM106C-216ENST00000551305 PRO0461Q9UI25 63 aa6.36□□□□□ -1.39
TMEM106C-216ENST00000551305 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
TMEM106C-216ENST00000551305 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
TMEM106C-216ENST00000551305 SPRR2EP22531 72 aa6.34□□□□□ -1.39
TMEM106C-216ENST00000551305 SPRR2BP35325 72 aa6.34□□□□□ -1.39
TMEM106C-216ENST00000551305 SPRR2AP35326 72 aa6.34□□□□□ -1.39
TMEM106C-216ENST00000551305 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
TMEM106C-216ENST00000551305 F8W1H4 67 aa6.29□□□□□ -1.4
TMEM106C-216ENST00000551305 UBL5Q9BZL1 73 aa6.29□□□□□ -1.4
TMEM106C-216ENST00000551305 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
TMEM106C-216ENST00000551305 CYP4F30PQ9H0H9 118 aa6.26□□□□□ -1.41
TMEM106C-216ENST00000551305 MT1XP80297 61 aa6.23□□□□□ -1.41
TMEM106C-216ENST00000551305 ETDBQ3ZM63 59 aa6.23□□□□□ -1.41
TMEM106C-216ENST00000551305 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
TMEM106C-216ENST00000551305 LCE1AQ5T7P2 110 aa6.21□□□□□ -1.41
TMEM106C-216ENST00000551305 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.41
TMEM106C-216ENST00000551305 KRTAP2-2Q9BYT5 123 aa6.21□□□□□ -1.41
TMEM106C-216ENST00000551305 KRTAP2-1Q9BYU5 128 aa6.21□□□□□ -1.41
TMEM106C-216ENST00000551305 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
TMEM106C-216ENST00000551305 H0YAA0 97 aa6.18□□□□□ -1.42
TMEM106C-216ENST00000551305 A8MUN3 132 aa6.16□□□□□ -1.42
TMEM106C-216ENST00000551305 NDUFC1O43677 76 aa6.16□□□□□ -1.42
TMEM106C-216ENST00000551305 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
TMEM106C-216ENST00000551305 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
TMEM106C-216ENST00000551305 ADM2Q7Z4H4 148 aa6.16□□□□□ -1.42
TMEM106C-216ENST00000551305 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
TMEM106C-216ENST00000551305 K7ERU9 68 aa6.12□□□□□ -1.43
TMEM106C-216ENST00000551305 SPRR2DP22532 72 aa6.12□□□□□ -1.43
TMEM106C-216ENST00000551305 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
TMEM106C-216ENST00000551305 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
TMEM106C-216ENST00000551305 KRTAP12-2P59991 146 aa6.1□□□□□ -1.43
TMEM106C-216ENST00000551305 J3QR89 54 aa6.06□□□□□ -1.44
TMEM106C-216ENST00000551305 ACYP1P07311 99 aa6.03□□□□□ -1.44
TMEM106C-216ENST00000551305 FAM240AA0A1B0GVK7 77 aa6.01□□□□□ -1.45
TMEM106C-216ENST00000551305 H0Y9P7 68 aa6□□□□□ -1.45
TMEM106C-216ENST00000551305 P0C880 135 aa5.99□□□□□ -1.45
TMEM106C-216ENST00000551305 R4GN34 69 aa5.99□□□□□ -1.45
TMEM106C-216ENST00000551305 UQCRQO14949 82 aa5.97□□□□□ -1.45
TMEM106C-216ENST00000551305 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.45
TMEM106C-216ENST00000551305 M0QZ58 72 aa5.95□□□□□ -1.46
TMEM106C-216ENST00000551305 ATOX1O00244 68 aa5.94□□□□□ -1.46
TMEM106C-216ENST00000551305 MT-ATP8P03928 68 aa5.93□□□□□ -1.46
TMEM106C-216ENST00000551305 HIST1H4AP62805 103 aaKnown RBP5.91□□□□□ -1.46
TMEM106C-216ENST00000551305 LINC01554Q52M75 96 aa5.91□□□□□ -1.46
TMEM106C-216ENST00000551305 KRTAP10-12P60413 245 aa5.9□□□□□ -1.47
TMEM106C-216ENST00000551305 LINC00643Q86TS7 51 aa5.89□□□□□ -1.47
TMEM106C-216ENST00000551305 LINC00208Q96KT6 92 aa5.89□□□□□ -1.47
TMEM106C-216ENST00000551305 C20orf197Q8N268 126 aa5.87□□□□□ -1.47
TMEM106C-216ENST00000551305 ATP5EP2Q5VTU8 51 aa5.81□□□□□ -1.48
TMEM106C-216ENST00000551305 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
TMEM106C-216ENST00000551305 GPR98Q8WXG9 6306 aa5.78□□□□□ -1.48
TMEM106C-216ENST00000551305 MP68P56378 58 aa5.76□□□□□ -1.49
TMEM106C-216ENST00000551305 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
TMEM106C-216ENST00000551305 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
TMEM106C-216ENST00000551305 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
TMEM106C-216ENST00000551305 PCP4P48539 62 aa5.7□□□□□ -1.5
TMEM106C-216ENST00000551305 ANAPC13Q9BS18 74 aa5.62□□□□□ -1.51
TMEM106C-216ENST00000551305 H3BPC8 53 aa5.61□□□□□ -1.51
TMEM106C-216ENST00000551305 KRTAP19-7Q3SYF9 63 aa5.58□□□□□ -1.52
TMEM106C-216ENST00000551305 TRAV7A0A075B6U4 112 aa5.57□□□□□ -1.52
TMEM106C-216ENST00000551305 SERP2Q8N6R1 65 aa5.57□□□□□ -1.52
TMEM106C-216ENST00000551305 CCDC179H3BU77 68 aa5.56□□□□□ -1.52
TMEM106C-216ENST00000551305 COX7CP15954 63 aa5.55□□□□□ -1.52
TMEM106C-216ENST00000551305 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
TMEM106C-216ENST00000551305 MT1EP04732 61 aa5.54□□□□□ -1.52
TMEM106C-216ENST00000551305 ACYP2P14621 99 aa5.52□□□□□ -1.53
TMEM106C-216ENST00000551305 SMIM20Q8N5G0 67 aa5.52□□□□□ -1.53
TMEM106C-216ENST00000551305 CYSTM1Q9H1C7 97 aa5.5□□□□□ -1.53
TMEM106C-216ENST00000551305 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
TMEM106C-216ENST00000551305 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
TMEM106C-216ENST00000551305 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
TMEM106C-216ENST00000551305 CHKB-CPT1BH3BT56 60 aa5.42□□□□□ -1.54
TMEM106C-216ENST00000551305 MT4P47944 62 aa5.42□□□□□ -1.54
TMEM106C-216ENST00000551305 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
TMEM106C-216ENST00000551305 H7BZZ5 65 aa5.39□□□□□ -1.55
TMEM106C-216ENST00000551305 MT1GP13640 62 aa5.37□□□□□ -1.55
TMEM106C-216ENST00000551305 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
TMEM106C-216ENST00000551305 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
TMEM106C-216ENST00000551305 A0A0D9SG42 100 aa5.33□□□□□ -1.56
TMEM106C-216ENST00000551305 TMEM258P61165 79 aa5.3□□□□□ -1.56
TMEM106C-216ENST00000551305 PP632Q6XCG6 107 aa5.29□□□□□ -1.56
TMEM106C-216ENST00000551305 MT1MQ8N339 61 aa5.29□□□□□ -1.56
TMEM106C-216ENST00000551305 AHNAK2Q8IVF2 5795 aa5.27□□□□□ -1.57
TMEM106C-216ENST00000551305 KRTAP5-10Q6L8G5 202 aa5.26□□□□□ -1.57
TMEM106C-216ENST00000551305 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms