RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 STARD9Q9P2P6 4700 aa7.37□□□□□ -1.23
RBFOX1-212ENST00000550418 PRKDCP78527 4128 aaKnown RBP7.36□□□□□ -1.23
RBFOX1-212ENST00000550418 KRTAP10-4P60372 401 aaPredicted RBP7.35□□□□□ -1.23
RBFOX1-212ENST00000550418 MT1HL1P0DM35 61 aa7.32□□□□□ -1.24
RBFOX1-212ENST00000550418 KRTAP4-5Q9BYR2 181 aa7.28□□□□□ -1.24
RBFOX1-212ENST00000550418 ANK2Q01484 3957 aa7.26□□□□□ -1.25
RBFOX1-212ENST00000550418 VPS13DQ5THJ4 4388 aa7.25□□□□□ -1.25
RBFOX1-212ENST00000550418 FAT1Q14517 4588 aa7.25□□□□□ -1.25
RBFOX1-212ENST00000550418 INE1O15225 51 aa7.2□□□□□ -1.26
RBFOX1-212ENST00000550418 KMT2AQ03164 3969 aa7.17□□□□□ -1.26
RBFOX1-212ENST00000550418 DNAH17Q9UFH2 4485 aa7.14□□□□□ -1.27
RBFOX1-212ENST00000550418 DYNC1H1Q14204 4646 aaKnown RBP7.14□□□□□ -1.27
RBFOX1-212ENST00000550418 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
RBFOX1-212ENST00000550418 ALMS1Q8TCU4 4167 aa7.11□□□□□ -1.27
RBFOX1-212ENST00000550418 LYSTQ99698 3801 aa7.09□□□□□ -1.27
RBFOX1-212ENST00000550418 DNAH8Q96JB1 4490 aa7.08□□□□□ -1.28
RBFOX1-212ENST00000550418 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
RBFOX1-212ENST00000550418 RYR1P21817 5038 aa7.01□□□□□ -1.29
RBFOX1-212ENST00000550418 CMYA5Q8N3K9 4069 aa6.99□□□□□ -1.29
RBFOX1-212ENST00000550418 DNAH3Q8TD57 4116 aa6.97□□□□□ -1.29
RBFOX1-212ENST00000550418 KIAA1109Q2LD37 5005 aa6.97□□□□□ -1.29
RBFOX1-212ENST00000550418 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
RBFOX1-212ENST00000550418 MYCBP2O75592 4640 aa6.92□□□□□ -1.3
RBFOX1-212ENST00000550418 DYNC2H1Q8NCM8 4307 aaKnown RBP6.9□□□□□ -1.31
RBFOX1-212ENST00000550418 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
RBFOX1-212ENST00000550418 DNAH7Q8WXX0 4024 aa6.88□□□□□ -1.31
RBFOX1-212ENST00000550418 VPS13BQ7Z7G8 4022 aa6.86□□□□□ -1.31
RBFOX1-212ENST00000550418 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.31
RBFOX1-212ENST00000550418 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.32
RBFOX1-212ENST00000550418 RYR3Q15413 4870 aa6.83□□□□□ -1.32
RBFOX1-212ENST00000550418 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
RBFOX1-212ENST00000550418 FAT2Q9NYQ8 4349 aa6.81□□□□□ -1.32
RBFOX1-212ENST00000550418 FRAS1Q86XX4 4008 aa6.81□□□□□ -1.32
RBFOX1-212ENST00000550418 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
RBFOX1-212ENST00000550418 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
RBFOX1-212ENST00000550418 HYDINQ4G0P3 5121 aa6.76□□□□□ -1.33
RBFOX1-212ENST00000550418 APOBP04114 4563 aaKnown RBP6.75□□□□□ -1.33
RBFOX1-212ENST00000550418 FAT3Q8TDW7 4589 aa6.74□□□□□ -1.33
RBFOX1-212ENST00000550418 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
RBFOX1-212ENST00000550418 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
RBFOX1-212ENST00000550418 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
RBFOX1-212ENST00000550418 PKHD1P08F94 4074 aa6.65□□□□□ -1.34
RBFOX1-212ENST00000550418 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
RBFOX1-212ENST00000550418 RYR2Q92736 4967 aa6.61□□□□□ -1.35
RBFOX1-212ENST00000550418 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
RBFOX1-212ENST00000550418 HERC2O95714 4834 aa6.47□□□□□ -1.37
RBFOX1-212ENST00000550418 LRP2P98164 4655 aa6.46□□□□□ -1.38
RBFOX1-212ENST00000550418 CRCT1Q9UGL9 99 aa6.44□□□□□ -1.38
RBFOX1-212ENST00000550418 HSPG2P98160 4391 aa6.35□□□□□ -1.39
RBFOX1-212ENST00000550418 PKD1P98161 4303 aa6.33□□□□□ -1.4
RBFOX1-212ENST00000550418 MT1HP80294 61 aa6.26□□□□□ -1.41
RBFOX1-212ENST00000550418 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
RBFOX1-212ENST00000550418 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
RBFOX1-212ENST00000550418 EPPK1P58107 5090 aaKnown RBP6.2□□□□□ -1.42
RBFOX1-212ENST00000550418 LPAP08519 4548 aa6.18□□□□□ -1.42
RBFOX1-212ENST00000550418 BIRC6Q9NR09 4857 aa6.16□□□□□ -1.42
RBFOX1-212ENST00000550418 MT2AP02795 61 aa6.15□□□□□ -1.42
RBFOX1-212ENST00000550418 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.42
RBFOX1-212ENST00000550418 MT1FP04733 61 aa6.1□□□□□ -1.43
RBFOX1-212ENST00000550418 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
RBFOX1-212ENST00000550418 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
RBFOX1-212ENST00000550418 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
RBFOX1-212ENST00000550418 HERC1Q15751 4861 aa5.98□□□□□ -1.45
RBFOX1-212ENST00000550418 PKHD1L1Q86WI1 4243 aa5.96□□□□□ -1.46
RBFOX1-212ENST00000550418 TNXBP22105 4242 aa5.96□□□□□ -1.46
RBFOX1-212ENST00000550418 KRTAP19-5Q3LI72 72 aa5.95□□□□□ -1.46
RBFOX1-212ENST00000550418 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
RBFOX1-212ENST00000550418 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
RBFOX1-212ENST00000550418 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
RBFOX1-212ENST00000550418 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
RBFOX1-212ENST00000550418 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
RBFOX1-212ENST00000550418 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
RBFOX1-212ENST00000550418 MUC2Q02817 5179 aa5.74□□□□□ -1.49
RBFOX1-212ENST00000550418 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
RBFOX1-212ENST00000550418 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
RBFOX1-212ENST00000550418 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
RBFOX1-212ENST00000550418 KRTAP19-2Q3LHN2 52 aa5.71□□□□□ -1.5
RBFOX1-212ENST00000550418 MUC17Q685J3 4493 aa5.69□□□□□ -1.5
RBFOX1-212ENST00000550418 MT1XP80297 61 aa5.65□□□□□ -1.51
RBFOX1-212ENST00000550418 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.51
RBFOX1-212ENST00000550418 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
RBFOX1-212ENST00000550418 MT1BP07438 61 aa5.64□□□□□ -1.51
RBFOX1-212ENST00000550418 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
RBFOX1-212ENST00000550418 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
RBFOX1-212ENST00000550418 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
RBFOX1-212ENST00000550418 SPRR2EP22531 72 aa5.55□□□□□ -1.52
RBFOX1-212ENST00000550418 SPRR2BP35325 72 aa5.55□□□□□ -1.52
RBFOX1-212ENST00000550418 SPRR2AP35326 72 aa5.55□□□□□ -1.52
RBFOX1-212ENST00000550418 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
RBFOX1-212ENST00000550418 HMCN2Q8NDA2 5059 aa5.5□□□□□ -1.53
RBFOX1-212ENST00000550418 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
RBFOX1-212ENST00000550418 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
RBFOX1-212ENST00000550418 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
RBFOX1-212ENST00000550418 LCE2BO14633 110 aa5.4□□□□□ -1.54
RBFOX1-212ENST00000550418 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
RBFOX1-212ENST00000550418 SPRR2DP22532 72 aa5.38□□□□□ -1.55
RBFOX1-212ENST00000550418 MT1GP13640 62 aa5.35□□□□□ -1.55
RBFOX1-212ENST00000550418 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
RBFOX1-212ENST00000550418 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.58
RBFOX1-212ENST00000550418 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms