RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 MT3P25713 68 aa3.52□□□□□ -1.85
NEK3-201ENST00000550331 NAA38Q9BRA0 125 aaKnown RBP3.52□□□□□ -1.85
NEK3-201ENST00000550331 KMT2DO14686 5537 aa3.52□□□□□ -1.85
NEK3-201ENST00000550331 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
NEK3-201ENST00000550331 Q5W150 140 aa3.5□□□□□ -1.85
NEK3-201ENST00000550331 BPY2O14599 106 aa3.48□□□□□ -1.85
NEK3-201ENST00000550331 C4orf26Q17RF5 130 aa3.47□□□□□ -1.85
NEK3-201ENST00000550331 A6NN06 94 aa3.46□□□□□ -1.86
NEK3-201ENST00000550331 HCG22E2RYF7 251 aa3.46□□□□□ -1.86
NEK3-201ENST00000550331 H3BT86 120 aa3.46□□□□□ -1.86
NEK3-201ENST00000550331 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
NEK3-201ENST00000550331 CXCL6P80162 114 aa3.46□□□□□ -1.86
NEK3-201ENST00000550331 CASC2Q6XLA1 102 aa3.46□□□□□ -1.86
NEK3-201ENST00000550331 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
NEK3-201ENST00000550331 FAM236AA0A1B0GUQ0 79 aa3.45□□□□□ -1.86
NEK3-201ENST00000550331 FAM236BA0A1B0GV22 79 aa3.45□□□□□ -1.86
NEK3-201ENST00000550331 MT1BP07438 61 aa3.45□□□□□ -1.86
NEK3-201ENST00000550331 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
NEK3-201ENST00000550331 C5orf47Q569G3 176 aa3.45□□□□□ -1.86
NEK3-201ENST00000550331 V9GYY9 64 aa3.45□□□□□ -1.86
NEK3-201ENST00000550331 Q5VV11 94 aa3.44□□□□□ -1.86
NEK3-201ENST00000550331 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
NEK3-201ENST00000550331 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
NEK3-201ENST00000550331 Q8N9L7 120 aa3.43□□□□□ -1.86
NEK3-201ENST00000550331 S4R3F8 94 aa3.43□□□□□ -1.86
NEK3-201ENST00000550331 CSAG1Q6PB30 78 aa3.42□□□□□ -1.86
NEK3-201ENST00000550331 TSTD3H0UI37 97 aa3.41□□□□□ -1.86
NEK3-201ENST00000550331 SMIM6P0DI80 62 aa3.41□□□□□ -1.86
NEK3-201ENST00000550331 BATFQ16520 125 aa3.4□□□□□ -1.87
NEK3-201ENST00000550331 C1orf64Q8NEQ6 169 aa3.4□□□□□ -1.87
NEK3-201ENST00000550331 A0A1W2PPM0 123 aa3.39□□□□□ -1.87
NEK3-201ENST00000550331 LCA10Q71F78 164 aa3.39□□□□□ -1.87
NEK3-201ENST00000550331 TAX1BP3O14907 124 aa3.38□□□□□ -1.87
NEK3-201ENST00000550331 KLKP1Q107X0 134 aa3.38□□□□□ -1.87
NEK3-201ENST00000550331 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
NEK3-201ENST00000550331 UBL5Q9BZL1 73 aa3.37□□□□□ -1.87
NEK3-201ENST00000550331 OCR1Q9BZK8 76 aa3.35□□□□□ -1.87
NEK3-201ENST00000550331 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
NEK3-201ENST00000550331 CRIPTQ9P021 101 aa3.35□□□□□ -1.87
NEK3-201ENST00000550331 SPCS1Q9Y6A9 102 aa3.34□□□□□ -1.87
NEK3-201ENST00000550331 LOC105371267A0A1B0GV96 52 aa3.32□□□□□ -1.88
NEK3-201ENST00000550331 SPRR2EP22531 72 aa3.32□□□□□ -1.88
NEK3-201ENST00000550331 SPRR2BP35325 72 aa3.32□□□□□ -1.88
NEK3-201ENST00000550331 SPRR2AP35326 72 aa3.32□□□□□ -1.88
NEK3-201ENST00000550331 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
NEK3-201ENST00000550331 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
NEK3-201ENST00000550331 IMUPQ9GZP8 106 aa3.31□□□□□ -1.88
NEK3-201ENST00000550331 CYP4F30PQ9H0H9 118 aa3.3□□□□□ -1.88
NEK3-201ENST00000550331 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
NEK3-201ENST00000550331 PRO0461Q9UI25 63 aa3.29□□□□□ -1.88
NEK3-201ENST00000550331 H0YAA0 97 aa3.27□□□□□ -1.89
NEK3-201ENST00000550331 A0A087WVE0 104 aa3.26□□□□□ -1.89
NEK3-201ENST00000550331 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
NEK3-201ENST00000550331 LOC101927531A0A1B0GV80 90 aa3.26□□□□□ -1.89
NEK3-201ENST00000550331 K7EP34 96 aa3.26□□□□□ -1.89
NEK3-201ENST00000550331 NDUFC1O43677 76 aa3.24□□□□□ -1.89
NEK3-201ENST00000550331 COL5A1-AS1Q5SY13 56 aa3.24□□□□□ -1.89
NEK3-201ENST00000550331 PRO2289Q9P1D8 64 aa3.24□□□□□ -1.89
NEK3-201ENST00000550331 FAM240AA0A1B0GVK7 77 aa3.23□□□□□ -1.89
NEK3-201ENST00000550331 A8MUN3 132 aa3.21□□□□□ -1.9
NEK3-201ENST00000550331 SPRR2DP22532 72 aa3.21□□□□□ -1.9
NEK3-201ENST00000550331 F8W1H4 67 aa3.2□□□□□ -1.9
NEK3-201ENST00000550331 ATOX1O00244 68 aa3.2□□□□□ -1.9
NEK3-201ENST00000550331 MT1XP80297 61 aa3.2□□□□□ -1.9
NEK3-201ENST00000550331 GTF2H5Q6ZYL4 71 aa3.2□□□□□ -1.9
NEK3-201ENST00000550331 ADM2Q7Z4H4 148 aa3.2□□□□□ -1.9
NEK3-201ENST00000550331 UQCRQO14949 82 aa3.19□□□□□ -1.9
NEK3-201ENST00000550331 ACYP1P07311 99 aa3.19□□□□□ -1.9
NEK3-201ENST00000550331 ETDBQ3ZM63 59 aa3.19□□□□□ -1.9
NEK3-201ENST00000550331 H0Y9P7 68 aa3.18□□□□□ -1.9
NEK3-201ENST00000550331 ATP5EP2Q5VTU8 51 aa3.18□□□□□ -1.9
NEK3-201ENST00000550331 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
NEK3-201ENST00000550331 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
NEK3-201ENST00000550331 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
NEK3-201ENST00000550331 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
NEK3-201ENST00000550331 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
NEK3-201ENST00000550331 HIST1H4AP62805 103 aaKnown RBP3.14□□□□□ -1.91
NEK3-201ENST00000550331 R4GN34 69 aa3.14□□□□□ -1.91
NEK3-201ENST00000550331 C20orf197Q8N268 126 aa3.13□□□□□ -1.91
NEK3-201ENST00000550331 PSPHP1O15172 72 aa3.12□□□□□ -1.91
NEK3-201ENST00000550331 LINC00208Q96KT6 92 aa3.11□□□□□ -1.91
NEK3-201ENST00000550331 M0QZ58 72 aa3.1□□□□□ -1.91
NEK3-201ENST00000550331 P0C880 135 aa3.1□□□□□ -1.91
NEK3-201ENST00000550331 MP68P56378 58 aa3.1□□□□□ -1.91
NEK3-201ENST00000550331 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
NEK3-201ENST00000550331 SMIM26A0A096LP01 95 aa3.07□□□□□ -1.92
NEK3-201ENST00000550331 LINC00643Q86TS7 51 aa3.07□□□□□ -1.92
NEK3-201ENST00000550331 CAMK2N1Q7Z7J9 78 aa3.06□□□□□ -1.92
NEK3-201ENST00000550331 DMAC1Q96GE9 116 aa3.06□□□□□ -1.92
NEK3-201ENST00000550331 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
NEK3-201ENST00000550331 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
NEK3-201ENST00000550331 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
NEK3-201ENST00000550331 H3BPC8 53 aa3.04□□□□□ -1.92
NEK3-201ENST00000550331 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
NEK3-201ENST00000550331 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
NEK3-201ENST00000550331 TRAV7A0A075B6U4 112 aa2.99□□□□□ -1.93
NEK3-201ENST00000550331 A0A1B0GV90 55 aa2.98□□□□□ -1.93
NEK3-201ENST00000550331 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
NEK3-201ENST00000550331 MT-ATP8P03928 68 aa2.97□□□□□ -1.93
NEK3-201ENST00000550331 ANAPC13Q9BS18 74 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms