RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 PLECQ15149 4684 aaKnown RBP0.01□□□□□ -2.41
CCDC38-208ENST00000549876 LAMA2P24043 3122 aaKnown RBP0.01□□□□□ -2.41
CCDC38-208ENST00000549876 KIAA1109Q2LD37 5005 aa0.01□□□□□ -2.41
CCDC38-208ENST00000549876 DNAH6Q9C0G6 4158 aa0.01□□□□□ -2.41
CCDC38-208ENST00000549876 FAT1Q14517 4588 aa0.01□□□□□ -2.41
CCDC38-208ENST00000549876 RYR3Q15413 4870 aa0.01□□□□□ -2.41
CCDC38-208ENST00000549876 LRRK2Q5S007 2527 aa0.01□□□□□ -2.41
CCDC38-208ENST00000549876 MAP1AP78559 2803 aaPredicted RBP0□□□□□ -2.41
CCDC38-208ENST00000549876 DYNC1H1Q14204 4646 aaKnown RBP0□□□□□ -2.41
CCDC38-208ENST00000549876 NFAT5O94916 1531 aa0□□□□□ -2.41
CCDC38-208ENST00000549876 DNAH5Q8TE73 4624 aa0□□□□□ -2.41
CCDC38-208ENST00000549876 TEP1Q99973 2627 aaKnown RBP0□□□□□ -2.41
CCDC38-208ENST00000549876 CELSR3Q9NYQ7 3312 aa-0□□□□□ -2.41
CCDC38-208ENST00000549876 TACC2O95359 2948 aa-0□□□□□ -2.41
CCDC38-208ENST00000549876 EPG5Q9HCE0 2579 aa-0□□□□□ -2.41
CCDC38-208ENST00000549876 EYSQ5T1H1 3165 aa-0.01□□□□□ -2.41
CCDC38-208ENST00000549876 DNAH8Q96JB1 4490 aa-0.01□□□□□ -2.41
CCDC38-208ENST00000549876 NDUFA1O15239 70 aa-0.01□□□□□ -2.41
CCDC38-208ENST00000549876 DNAH1Q9P2D7 4330 aa-0.01□□□□□ -2.41
CCDC38-208ENST00000549876 DNHD1Q96M86 4753 aa-0.01□□□□□ -2.41
CCDC38-208ENST00000549876 NBEAL2Q6ZNJ1 2754 aa-0.01□□□□□ -2.41
CCDC38-208ENST00000549876 NBEAL1Q6ZS30 2694 aa-0.01□□□□□ -2.41
CCDC38-208ENST00000549876 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.02□□□□□ -2.41
CCDC38-208ENST00000549876 HTTP42858 3142 aa-0.02□□□□□ -2.41
CCDC38-208ENST00000549876 MUC3AQ02505 3323 aa-0.02□□□□□ -2.41
CCDC38-208ENST00000549876 DNAH17Q9UFH2 4485 aa-0.02□□□□□ -2.41
CCDC38-208ENST00000549876 EP400Q96L91 3159 aa-0.02□□□□□ -2.41
CCDC38-208ENST00000549876 TRIOO75962 3097 aa-0.02□□□□□ -2.41
CCDC38-208ENST00000549876 DNAH10Q8IVF4 4471 aa-0.02□□□□□ -2.41
CCDC38-208ENST00000549876 SPEGQ15772 3267 aa-0.02□□□□□ -2.41
CCDC38-208ENST00000549876 HIVEP1P15822 2718 aa-0.02□□□□□ -2.41
CCDC38-208ENST00000549876 ATP7AQ04656 1500 aa-0.03□□□□□ -2.41
CCDC38-208ENST00000549876 ACACBO00763 2458 aa-0.03□□□□□ -2.41
CCDC38-208ENST00000549876 CLPSL2Q6UWE3 100 aa-0.03□□□□□ -2.41
CCDC38-208ENST00000549876 NBEAQ8NFP9 2946 aa-0.03□□□□□ -2.41
CCDC38-208ENST00000549876 MKI67P46013 3256 aaKnown RBP-0.03□□□□□ -2.41
CCDC38-208ENST00000549876 SRCAPQ6ZRS2 3230 aa-0.03□□□□□ -2.41
CCDC38-208ENST00000549876 WDFY4Q6ZS81 3184 aa-0.03□□□□□ -2.41
CCDC38-208ENST00000549876 C5orf42Q9H799 3197 aa-0.03□□□□□ -2.41
CCDC38-208ENST00000549876 LAMA1P25391 3075 aa-0.03□□□□□ -2.41
CCDC38-208ENST00000549876 RIF1Q5UIP0 2472 aaKnown RBP-0.04□□□□□ -2.42
CCDC38-208ENST00000549876 NEBP20929 6669 aa-0.04□□□□□ -2.42
CCDC38-208ENST00000549876 COL6A5A8TX70 2615 aa-0.04□□□□□ -2.42
CCDC38-208ENST00000549876 UNC80Q8N2C7 3258 aa-0.04□□□□□ -2.42
CCDC38-208ENST00000549876 DCHS1Q96JQ0 3298 aa-0.04□□□□□ -2.42
CCDC38-208ENST00000549876 FREM2Q5SZK8 3169 aa-0.04□□□□□ -2.42
CCDC38-208ENST00000549876 FASNP49327 2511 aaKnown RBP-0.04□□□□□ -2.42
CCDC38-208ENST00000549876 RANBP2P49792 3224 aaKnown RBP-0.04□□□□□ -2.42
CCDC38-208ENST00000549876 CSMD2Q7Z408 3487 aa-0.04□□□□□ -2.42
CCDC38-208ENST00000549876 VCANP13611 3396 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 PCNTO95613 3336 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 CENPFP49454 3210 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 RELNP78509 3460 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 SAMD9LQ8IVG5 1584 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 CEP350Q5VT06 3117 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 UTP20O75691 2785 aaKnown RBP-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 GOLGB1Q14789 3259 aaKnown RBP-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 ZFHX4Q86UP3 3567 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 CFAP54Q96N23 3096 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 MXRA5Q9NR99 2828 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 FRYQ5TBA9 3013 aa-0.05□□□□□ -2.42
CCDC38-208ENST00000549876 LOC400499M0QZD8 3231 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 CFAP47Q6ZTR5 3102 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 USP34Q70CQ2 3546 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 ATMQ13315 3056 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 ADGRG4Q8IZF6 3080 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 LAMA5O15230 3695 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 DMXL2Q8TDJ6 3036 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 SZT2Q5T011 3432 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 KRTAP8-1Q8IUC2 63 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 CHD7Q9P2D1 2997 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 DNAH7Q8WXX0 4024 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 XIRP2A4UGR9 3374 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 MYO15AQ9UKN7 3530 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 MGAQ8IWI9 3026 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 NBPF19A0A087WUL8 3843 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 CDH23Q9H251 3354 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 KALRNO60229 2985 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 MYO18BQ8IUG5 2567 aa-0.06□□□□□ -2.42
CCDC38-208ENST00000549876 BOD1L1Q8NFC6 3051 aa-0.07□□□□□ -2.42
CCDC38-208ENST00000549876 UTRNP46939 3433 aa-0.07□□□□□ -2.42
CCDC38-208ENST00000549876 FRYLO94915 3013 aa-0.07□□□□□ -2.42
CCDC38-208ENST00000549876 KRTAP19-7Q3SYF9 63 aa-0.07□□□□□ -2.42
CCDC38-208ENST00000549876 WDR87Q6ZQQ6 2873 aa-0.07□□□□□ -2.42
CCDC38-208ENST00000549876 CCDC168Q8NDH2 2452 aa-0.07□□□□□ -2.42
CCDC38-208ENST00000549876 VPS13AQ96RL7 3174 aa-0.07□□□□□ -2.42
CCDC38-208ENST00000549876 SPENQ96T58 3664 aaKnown RBP-0.08□□□□□ -2.42
CCDC38-208ENST00000549876 PRUNE2Q8WUY3 3088 aa-0.08□□□□□ -2.42
CCDC38-208ENST00000549876 MT4P47944 62 aa-0.08□□□□□ -2.42
CCDC38-208ENST00000549876 KRTAP20-2Q3LI61 65 aa-0.08□□□□□ -2.42
CCDC38-208ENST00000549876 ASPMQ8IZT6 3477 aa-0.08□□□□□ -2.42
CCDC38-208ENST00000549876 NIPBLQ6KC79 2804 aaeCLIP-0.08□□□□□ -2.42
CCDC38-208ENST00000549876 MGAM2Q2M2H8 2515 aa-0.09□□□□□ -2.42
CCDC38-208ENST00000549876 WDFY3Q8IZQ1 3526 aa-0.09□□□□□ -2.42
CCDC38-208ENST00000549876 DNAH12Q6ZR08 3092 aa-0.09□□□□□ -2.42
CCDC38-208ENST00000549876 CSMD1Q96PZ7 3565 aa-0.09□□□□□ -2.42
CCDC38-208ENST00000549876 BRCA2P51587 3418 aa-0.09□□□□□ -2.42
CCDC38-208ENST00000549876 POLR2KP53803 58 aaKnown RBP-0.09□□□□□ -2.42
CCDC38-208ENST00000549876 KRTAP19-5Q3LI72 72 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms