RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 PRO1854Q9UHT4 67 aa3.48□□□□□ -1.85
TMEM116-208ENST00000549537 NDUFC1O43677 76 aa3.47□□□□□ -1.85
TMEM116-208ENST00000549537 OBSCN-AS1Q96MR7 158 aa3.47□□□□□ -1.85
TMEM116-208ENST00000549537 Q96NJ1 140 aa3.47□□□□□ -1.85
TMEM116-208ENST00000549537 USH2AO75445 5202 aa3.46□□□□□ -1.86
TMEM116-208ENST00000549537 A0A1W2PNM2 257 aa3.46□□□□□ -1.86
TMEM116-208ENST00000549537 CCKP06307 115 aa3.46□□□□□ -1.86
TMEM116-208ENST00000549537 A0A087WSZ3 146 aa3.45□□□□□ -1.86
TMEM116-208ENST00000549537 C20orf166-AS1Q96NR2 134 aa3.45□□□□□ -1.86
TMEM116-208ENST00000549537 CYSTM1Q9H1C7 97 aa3.45□□□□□ -1.86
TMEM116-208ENST00000549537 A8MUU9 505 aa3.44□□□□□ -1.86
TMEM116-208ENST00000549537 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
TMEM116-208ENST00000549537 Q1T7F1 81 aa3.43□□□□□ -1.86
TMEM116-208ENST00000549537 ATP11AUNQ6ZP68 121 aa3.43□□□□□ -1.86
TMEM116-208ENST00000549537 A6NN06 94 aa3.42□□□□□ -1.86
TMEM116-208ENST00000549537 H7BZZ5 65 aa3.42□□□□□ -1.86
TMEM116-208ENST00000549537 KRTAP10-5P60370 271 aa3.42□□□□□ -1.86
TMEM116-208ENST00000549537 KLKP1Q107X0 134 aa3.42□□□□□ -1.86
TMEM116-208ENST00000549537 TRBV7-4A0A0J9YYF1 115 aa3.41□□□□□ -1.86
TMEM116-208ENST00000549537 COX6B2Q6YFQ2 88 aa3.41□□□□□ -1.86
TMEM116-208ENST00000549537 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
TMEM116-208ENST00000549537 ORMDL1Q9P0S3 153 aa3.41□□□□□ -1.86
TMEM116-208ENST00000549537 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
TMEM116-208ENST00000549537 H3BQ85 93 aa3.4□□□□□ -1.87
TMEM116-208ENST00000549537 DSCR10P59022 87 aa3.4□□□□□ -1.87
TMEM116-208ENST00000549537 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.87
TMEM116-208ENST00000549537 M0R2T5 61 aa3.39□□□□□ -1.87
TMEM116-208ENST00000549537 DNAL4O96015 105 aa3.39□□□□□ -1.87
TMEM116-208ENST00000549537 COX6CP09669 75 aa3.39□□□□□ -1.87
TMEM116-208ENST00000549537 RBM3P98179 157 aaKnown RBP3.39□□□□□ -1.87
TMEM116-208ENST00000549537 IGKV4-1P06312 121 aa3.38□□□□□ -1.87
TMEM116-208ENST00000549537 DEFB116Q30KQ4 102 aa3.38□□□□□ -1.87
TMEM116-208ENST00000549537 SPANXA2-OT1Q8N9U9 137 aa3.38□□□□□ -1.87
TMEM116-208ENST00000549537 C1orf64Q8NEQ6 169 aa3.38□□□□□ -1.87
TMEM116-208ENST00000549537 ATXN8Q156A1 80 aa3.37□□□□□ -1.87
TMEM116-208ENST00000549537 Q5W150 140 aa3.36□□□□□ -1.87
TMEM116-208ENST00000549537 ATP5EP2Q5VTU8 51 aa3.35□□□□□ -1.87
TMEM116-208ENST00000549537 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
TMEM116-208ENST00000549537 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.87
TMEM116-208ENST00000549537 TRAV7A0A075B6U4 112 aa3.34□□□□□ -1.87
TMEM116-208ENST00000549537 HRES1P13985 223 aa3.34□□□□□ -1.87
TMEM116-208ENST00000549537 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
TMEM116-208ENST00000549537 BAALC-AS2P0C853 105 aa3.33□□□□□ -1.88
TMEM116-208ENST00000549537 CYP4F30PQ9H0H9 118 aa3.33□□□□□ -1.88
TMEM116-208ENST00000549537 Q6ZQT0 140 aa3.32□□□□□ -1.88
TMEM116-208ENST00000549537 C20orf197Q8N268 126 aa3.32□□□□□ -1.88
TMEM116-208ENST00000549537 LOC110117498A0A087WWA1 95 aa3.3□□□□□ -1.88
TMEM116-208ENST00000549537 MT2AP02795 61 aa3.29□□□□□ -1.88
TMEM116-208ENST00000549537 ZCCHC13Q8WW36 166 aaKnown RBP3.29□□□□□ -1.88
TMEM116-208ENST00000549537 JMJD7-PLA2G4BH0Y9G9 81 aa3.28□□□□□ -1.88
TMEM116-208ENST00000549537 H3BPC8 53 aa3.28□□□□□ -1.88
TMEM116-208ENST00000549537 IGKV3D-7A0A0C4DH55 119 aa3.27□□□□□ -1.89
TMEM116-208ENST00000549537 MT1FP04733 61 aa3.27□□□□□ -1.89
TMEM116-208ENST00000549537 CDC42SE1Q9NRR8 79 aa3.27□□□□□ -1.89
TMEM116-208ENST00000549537 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
TMEM116-208ENST00000549537 hDV103S1A0JD37 113 aa3.26□□□□□ -1.89
TMEM116-208ENST00000549537 PDE6GP18545 87 aa3.26□□□□□ -1.89
TMEM116-208ENST00000549537 C14orf132Q9NPU4 83 aa3.26□□□□□ -1.89
TMEM116-208ENST00000549537 HCG22E2RYF7 251 aa3.25□□□□□ -1.89
TMEM116-208ENST00000549537 NDUFB1O75438 58 aa3.25□□□□□ -1.89
TMEM116-208ENST00000549537 SPINK7P58062 85 aa3.25□□□□□ -1.89
TMEM116-208ENST00000549537 Q5VV11 94 aa3.24□□□□□ -1.89
TMEM116-208ENST00000549537 MMP24-AS1A0A0U1RRL7 71 aa3.23□□□□□ -1.89
TMEM116-208ENST00000549537 A0A1B0GU33 70 aa3.23□□□□□ -1.89
TMEM116-208ENST00000549537 ROMO1P60602 79 aa3.23□□□□□ -1.89
TMEM116-208ENST00000549537 SPTSSBQ8NFR3 76 aa3.22□□□□□ -1.89
TMEM116-208ENST00000549537 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
TMEM116-208ENST00000549537 NREPQ16612 68 aa3.21□□□□□ -1.9
TMEM116-208ENST00000549537 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
TMEM116-208ENST00000549537 TMEM254Q8TBM7 123 aa3.21□□□□□ -1.9
TMEM116-208ENST00000549537 LOC101927531A0A1B0GV80 90 aa3.2□□□□□ -1.9
TMEM116-208ENST00000549537 K7EQZ3 153 aa3.2□□□□□ -1.9
TMEM116-208ENST00000549537 CASC2Q6XLA1 102 aa3.2□□□□□ -1.9
TMEM116-208ENST00000549537 WFDC13Q8IUB5 93 aa3.2□□□□□ -1.9
TMEM116-208ENST00000549537 MRPL34Q9BQ48 92 aaKnown RBP3.2□□□□□ -1.9
TMEM116-208ENST00000549537 CHKB-CPT1BH3BT56 60 aa3.18□□□□□ -1.9
TMEM116-208ENST00000549537 A0A087WVE0 104 aa3.17□□□□□ -1.9
TMEM116-208ENST00000549537 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
TMEM116-208ENST00000549537 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
TMEM116-208ENST00000549537 Q8N9L7 120 aa3.15□□□□□ -1.91
TMEM116-208ENST00000549537 SNURFQ9Y675 71 aa3.15□□□□□ -1.91
TMEM116-208ENST00000549537 NEBP20929 6669 aa3.14□□□□□ -1.91
TMEM116-208ENST00000549537 H1FX-AS1Q4G0G2 97 aa3.14□□□□□ -1.91
TMEM116-208ENST00000549537 A8MU10 97 aa3.13□□□□□ -1.91
TMEM116-208ENST00000549537 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
TMEM116-208ENST00000549537 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
TMEM116-208ENST00000549537 LINC00846Q9NV44 126 aa3.13□□□□□ -1.91
TMEM116-208ENST00000549537 P0C880 135 aa3.1□□□□□ -1.91
TMEM116-208ENST00000549537 R4GN34 69 aa3.1□□□□□ -1.91
TMEM116-208ENST00000549537 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
TMEM116-208ENST00000549537 PRR15LQ9BU68 103 aa3.09□□□□□ -1.91
TMEM116-208ENST00000549537 UBL5Q9BZL1 73 aa3.09□□□□□ -1.91
TMEM116-208ENST00000549537 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
TMEM116-208ENST00000549537 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
TMEM116-208ENST00000549537 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
TMEM116-208ENST00000549537 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
TMEM116-208ENST00000549537 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
TMEM116-208ENST00000549537 CSAG1Q6PB30 78 aa3.02□□□□□ -1.93
TMEM116-208ENST00000549537 TP53AIP1Q9HCN2 124 aa3.02□□□□□ -1.93
TMEM116-208ENST00000549537 S4R3F8 94 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms