RNA–Protein interactions for RNA: ENST00000548676.5

CAPRIN2-216, Transcript of caprin family member 2, humanhuman

TSL 1 (best)

Gene CAPRIN2, Length 3,221 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2-216ENST00000548676 DNAH2Q9P225 4427 aa3.24□□□□□ -1.89
CAPRIN2-216ENST00000548676 DNAH6Q9C0G6 4158 aa3.23□□□□□ -1.89
CAPRIN2-216ENST00000548676 DNAH11Q96DT5 4516 aa3.22□□□□□ -1.89
CAPRIN2-216ENST00000548676 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
CAPRIN2-216ENST00000548676 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
CAPRIN2-216ENST00000548676 FBN3Q75N90 2809 aa3.2□□□□□ -1.9
CAPRIN2-216ENST00000548676 DMBT1Q9UGM3 2413 aaPredicted RBP3.18□□□□□ -1.9
CAPRIN2-216ENST00000548676 DNHD1Q96M86 4753 aa3.18□□□□□ -1.9
CAPRIN2-216ENST00000548676 LCE2AQ5TA79 106 aaPredicted RBP3.16□□□□□ -1.9
CAPRIN2-216ENST00000548676 SACSQ9NZJ4 4579 aa3.16□□□□□ -1.9
CAPRIN2-216ENST00000548676 LCE2CQ5TA81 110 aa3.14□□□□□ -1.91
CAPRIN2-216ENST00000548676 KMT2AQ03164 3969 aa3.14□□□□□ -1.91
CAPRIN2-216ENST00000548676 DNAH5Q8TE73 4624 aa3.14□□□□□ -1.91
CAPRIN2-216ENST00000548676 LRP1BQ9NZR2 4599 aa3.13□□□□□ -1.91
CAPRIN2-216ENST00000548676 STARD9Q9P2P6 4700 aa3.12□□□□□ -1.91
CAPRIN2-216ENST00000548676 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
CAPRIN2-216ENST00000548676 R4GN34 69 aa3.1□□□□□ -1.91
CAPRIN2-216ENST00000548676 LORP23490 312 aaPredicted RBP3.08□□□□□ -1.92
CAPRIN2-216ENST00000548676 PRO2289Q9P1D8 64 aa3.08□□□□□ -1.92
CAPRIN2-216ENST00000548676 PKHD1L1Q86WI1 4243 aa3.08□□□□□ -1.92
CAPRIN2-216ENST00000548676 VPS13BQ7Z7G8 4022 aa3.07□□□□□ -1.92
CAPRIN2-216ENST00000548676 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
CAPRIN2-216ENST00000548676 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
CAPRIN2-216ENST00000548676 KRTAP10-4P60372 401 aaPredicted RBP3.04□□□□□ -1.92
CAPRIN2-216ENST00000548676 SMR3BP02814 79 aaPredicted RBP3.03□□□□□ -1.92
CAPRIN2-216ENST00000548676 PKD1P98161 4303 aa3.03□□□□□ -1.92
CAPRIN2-216ENST00000548676 INE1O15225 51 aa3.02□□□□□ -1.93
CAPRIN2-216ENST00000548676 PKHD1P08F94 4074 aa3.01□□□□□ -1.93
CAPRIN2-216ENST00000548676 LRP1Q07954 4544 aaKnown RBP2.98□□□□□ -1.93
CAPRIN2-216ENST00000548676 APOBP04114 4563 aaKnown RBP2.97□□□□□ -1.93
CAPRIN2-216ENST00000548676 FAT2Q9NYQ8 4349 aa2.96□□□□□ -1.94
CAPRIN2-216ENST00000548676 TNP1P09430 55 aa2.95□□□□□ -1.94
CAPRIN2-216ENST00000548676 MYCBP2O75592 4640 aa2.93□□□□□ -1.94
CAPRIN2-216ENST00000548676 TNXBP22105 4242 aa2.93□□□□□ -1.94
CAPRIN2-216ENST00000548676 FAT3Q8TDW7 4589 aa2.93□□□□□ -1.94
CAPRIN2-216ENST00000548676 DYNC1H1Q14204 4646 aaKnown RBP2.91□□□□□ -1.94
CAPRIN2-216ENST00000548676 Q5VSD8 79 aa2.91□□□□□ -1.94
CAPRIN2-216ENST00000548676 A0A1B0GVY2 172 aa2.9□□□□□ -1.94
CAPRIN2-216ENST00000548676 LOC100996750A0A140TA64 210 aa2.88□□□□□ -1.95
CAPRIN2-216ENST00000548676 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
CAPRIN2-216ENST00000548676 FAT1Q14517 4588 aa2.88□□□□□ -1.95
CAPRIN2-216ENST00000548676 HSPG2P98160 4391 aa2.88□□□□□ -1.95
CAPRIN2-216ENST00000548676 KMT2CQ8NEZ4 4911 aaKnown RBP2.8□□□□□ -1.96
CAPRIN2-216ENST00000548676 HYDINQ4G0P3 5121 aa2.8□□□□□ -1.96
CAPRIN2-216ENST00000548676 RYR3Q15413 4870 aa2.76□□□□□ -1.97
CAPRIN2-216ENST00000548676 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
CAPRIN2-216ENST00000548676 RYR2Q92736 4967 aa2.71□□□□□ -1.97
CAPRIN2-216ENST00000548676 BIRC6Q9NR09 4857 aa2.7□□□□□ -1.98
CAPRIN2-216ENST00000548676 EPPK1P58107 5090 aaKnown RBP2.68□□□□□ -1.98
CAPRIN2-216ENST00000548676 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
CAPRIN2-216ENST00000548676 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
CAPRIN2-216ENST00000548676 KRTAP17-1Q9BYP8 105 aa2.65□□□□□ -1.98
CAPRIN2-216ENST00000548676 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.99
CAPRIN2-216ENST00000548676 LRP2P98164 4655 aa2.63□□□□□ -1.99
CAPRIN2-216ENST00000548676 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
CAPRIN2-216ENST00000548676 LPAP08519 4548 aa2.62□□□□□ -1.99
CAPRIN2-216ENST00000548676 KIAA1109Q2LD37 5005 aa2.6□□□□□ -1.99
CAPRIN2-216ENST00000548676 SPRR2GQ9BYE4 73 aa2.6□□□□□ -1.99
CAPRIN2-216ENST00000548676 KRTAP4-1Q9BYQ7 146 aa2.6□□□□□ -1.99
CAPRIN2-216ENST00000548676 MUC17Q685J3 4493 aa2.59□□□□□ -1.99
CAPRIN2-216ENST00000548676 HERC1Q15751 4861 aa2.58□□□□□ -2
CAPRIN2-216ENST00000548676 HERC2O95714 4834 aa2.58□□□□□ -2
CAPRIN2-216ENST00000548676 KRTAP4-5Q9BYR2 181 aa2.57□□□□□ -2
CAPRIN2-216ENST00000548676 KRTAP12-3P60328 96 aa2.56□□□□□ -2
CAPRIN2-216ENST00000548676 KRTAP10-10P60014 251 aa2.55□□□□□ -2
CAPRIN2-216ENST00000548676 PCLOQ9Y6V0 5065 aa2.55□□□□□ -2
CAPRIN2-216ENST00000548676 KRTAP10-12P60413 245 aa2.54□□□□□ -2
CAPRIN2-216ENST00000548676 RYR1P21817 5038 aa2.53□□□□□ -2
CAPRIN2-216ENST00000548676 KRTAP19-1Q8IUB9 90 aa2.5□□□□□ -2.01
CAPRIN2-216ENST00000548676 ABCA13Q86UQ4 5058 aa2.49□□□□□ -2.01
CAPRIN2-216ENST00000548676 KRTAP10-5P60370 271 aa2.48□□□□□ -2.01
CAPRIN2-216ENST00000548676 KRTAP4-8Q9BYQ9 185 aa2.46□□□□□ -2.02
CAPRIN2-216ENST00000548676 KRTAP19-4Q3LI73 84 aa2.44□□□□□ -2.02
CAPRIN2-216ENST00000548676 KRTAP19-8Q3LI54 63 aa2.44□□□□□ -2.02
CAPRIN2-216ENST00000548676 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
CAPRIN2-216ENST00000548676 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
CAPRIN2-216ENST00000548676 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.03
CAPRIN2-216ENST00000548676 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.03
CAPRIN2-216ENST00000548676 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
CAPRIN2-216ENST00000548676 KRTAP9-2Q9BYQ4 174 aa2.4□□□□□ -2.03
CAPRIN2-216ENST00000548676 MT1XP80297 61 aa2.39□□□□□ -2.03
CAPRIN2-216ENST00000548676 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.38□□□□□ -2.03
CAPRIN2-216ENST00000548676 KRTAP9-6A0A140TA67 174 aa2.37□□□□□ -2.03
CAPRIN2-216ENST00000548676 M0R2T5 61 aa2.37□□□□□ -2.03
CAPRIN2-216ENST00000548676 MT2AP02795 61 aa2.33□□□□□ -2.04
CAPRIN2-216ENST00000548676 MT1BP07438 61 aa2.33□□□□□ -2.04
CAPRIN2-216ENST00000548676 LCE3BQ5TA77 95 aa2.33□□□□□ -2.04
CAPRIN2-216ENST00000548676 MT1FP04733 61 aa2.32□□□□□ -2.04
CAPRIN2-216ENST00000548676 KRTAP4-8A0A0G2JLE6 195 aa2.32□□□□□ -2.04
CAPRIN2-216ENST00000548676 KRTAP10-7P60409 375 aaPredicted RBP2.32□□□□□ -2.04
CAPRIN2-216ENST00000548676 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
CAPRIN2-216ENST00000548676 KRTAP19-5Q3LI72 72 aa2.3□□□□□ -2.04
CAPRIN2-216ENST00000548676 HMCN2Q8NDA2 5059 aa2.29□□□□□ -2.04
CAPRIN2-216ENST00000548676 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
CAPRIN2-216ENST00000548676 MT1HP80294 61 aa2.28□□□□□ -2.04
CAPRIN2-216ENST00000548676 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
CAPRIN2-216ENST00000548676 KRTAP9-4Q9BYQ2 154 aa2.28□□□□□ -2.04
CAPRIN2-216ENST00000548676 KRTAP9-6A8MVA2 160 aa2.27□□□□□ -2.05
CAPRIN2-216ENST00000548676 KRTAP9-8Q9BYQ0 159 aa2.26□□□□□ -2.05
CAPRIN2-216ENST00000548676 KRTAP9-7A8MTY7 169 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms