RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
SMARCD1-205ENST00000548573 KRTAP10-6P60371 365 aaPredicted RBP5.09□□□□□ -1.59
SMARCD1-205ENST00000548573 RPL37P61927 97 aaKnown RBP5.08□□□□□ -1.6
SMARCD1-205ENST00000548573 FLG2Q5D862 2391 aaPredicted RBP5.08□□□□□ -1.6
SMARCD1-205ENST00000548573 ROMO1P60602 79 aa5.07□□□□□ -1.6
SMARCD1-205ENST00000548573 KRTAP10-8P60410 259 aa5.06□□□□□ -1.6
SMARCD1-205ENST00000548573 S4R3F8 94 aa5.04□□□□□ -1.6
SMARCD1-205ENST00000548573 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
SMARCD1-205ENST00000548573 XP32Q5T750 250 aa5.02□□□□□ -1.61
SMARCD1-205ENST00000548573 CRIPTQ9P021 101 aa5.01□□□□□ -1.61
SMARCD1-205ENST00000548573 RYR2Q92736 4967 aa5.01□□□□□ -1.61
SMARCD1-205ENST00000548573 TNXBP22105 4242 aa5.01□□□□□ -1.61
SMARCD1-205ENST00000548573 LRP1Q07954 4544 aaKnown RBP5□□□□□ -1.61
SMARCD1-205ENST00000548573 A0A0D9SG42 100 aa4.98□□□□□ -1.61
SMARCD1-205ENST00000548573 HSPG2P98160 4391 aa4.97□□□□□ -1.61
SMARCD1-205ENST00000548573 P0C880 135 aa4.95□□□□□ -1.62
SMARCD1-205ENST00000548573 Q5VSD8 79 aa4.95□□□□□ -1.62
SMARCD1-205ENST00000548573 KMT2CQ8NEZ4 4911 aaKnown RBP4.95□□□□□ -1.62
SMARCD1-205ENST00000548573 DMBT1Q9UGM3 2413 aaPredicted RBP4.92□□□□□ -1.62
SMARCD1-205ENST00000548573 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
SMARCD1-205ENST00000548573 TPRXLQ17RH7 258 aa4.92□□□□□ -1.62
SMARCD1-205ENST00000548573 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
SMARCD1-205ENST00000548573 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
SMARCD1-205ENST00000548573 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
SMARCD1-205ENST00000548573 KRTAP12-1P59990 96 aa4.86□□□□□ -1.63
SMARCD1-205ENST00000548573 RYR3Q15413 4870 aa4.85□□□□□ -1.63
SMARCD1-205ENST00000548573 MYCBP2O75592 4640 aa4.85□□□□□ -1.63
SMARCD1-205ENST00000548573 M0QZ58 72 aa4.85□□□□□ -1.63
SMARCD1-205ENST00000548573 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
SMARCD1-205ENST00000548573 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
SMARCD1-205ENST00000548573 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
SMARCD1-205ENST00000548573 KRTAP17-1Q9BYP8 105 aa4.84□□□□□ -1.64
SMARCD1-205ENST00000548573 RYR1P21817 5038 aa4.8□□□□□ -1.64
SMARCD1-205ENST00000548573 LPAP08519 4548 aa4.78□□□□□ -1.64
SMARCD1-205ENST00000548573 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
SMARCD1-205ENST00000548573 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
SMARCD1-205ENST00000548573 LRP2P98164 4655 aa4.73□□□□□ -1.65
SMARCD1-205ENST00000548573 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
SMARCD1-205ENST00000548573 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
SMARCD1-205ENST00000548573 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
SMARCD1-205ENST00000548573 R4GN34 69 aa4.67□□□□□ -1.66
SMARCD1-205ENST00000548573 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
SMARCD1-205ENST00000548573 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
SMARCD1-205ENST00000548573 MUC17Q685J3 4493 aa4.59□□□□□ -1.67
SMARCD1-205ENST00000548573 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
SMARCD1-205ENST00000548573 ABCA13Q86UQ4 5058 aa4.54□□□□□ -1.68
SMARCD1-205ENST00000548573 KRTAP4-1Q9BYQ7 146 aa4.52□□□□□ -1.69
SMARCD1-205ENST00000548573 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
SMARCD1-205ENST00000548573 KRTAP19-2Q3LHN2 52 aa4.5□□□□□ -1.69
SMARCD1-205ENST00000548573 BIRC6Q9NR09 4857 aa4.49□□□□□ -1.69
SMARCD1-205ENST00000548573 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
SMARCD1-205ENST00000548573 HERC2O95714 4834 aa4.46□□□□□ -1.69
SMARCD1-205ENST00000548573 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
SMARCD1-205ENST00000548573 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
SMARCD1-205ENST00000548573 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
SMARCD1-205ENST00000548573 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
SMARCD1-205ENST00000548573 TNP1P09430 55 aa4.32□□□□□ -1.72
SMARCD1-205ENST00000548573 PCLOQ9Y6V0 5065 aa4.31□□□□□ -1.72
SMARCD1-205ENST00000548573 HERC1Q15751 4861 aa4.3□□□□□ -1.72
SMARCD1-205ENST00000548573 FLGP20930 4061 aaPredicted RBP4.28□□□□□ -1.72
SMARCD1-205ENST00000548573 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
SMARCD1-205ENST00000548573 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
SMARCD1-205ENST00000548573 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
SMARCD1-205ENST00000548573 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SMARCD1-205ENST00000548573 MUC2Q02817 5179 aa4.21□□□□□ -1.74
SMARCD1-205ENST00000548573 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
SMARCD1-205ENST00000548573 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
SMARCD1-205ENST00000548573 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
SMARCD1-205ENST00000548573 KRTAP19-1Q8IUB9 90 aa4.14□□□□□ -1.75
SMARCD1-205ENST00000548573 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.76
SMARCD1-205ENST00000548573 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
SMARCD1-205ENST00000548573 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
SMARCD1-205ENST00000548573 M0R2T5 61 aa4.04□□□□□ -1.76
SMARCD1-205ENST00000548573 MT1HP80294 61 aa4.04□□□□□ -1.76
SMARCD1-205ENST00000548573 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
SMARCD1-205ENST00000548573 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
SMARCD1-205ENST00000548573 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
SMARCD1-205ENST00000548573 MT2AP02795 61 aa4.01□□□□□ -1.77
SMARCD1-205ENST00000548573 MT1FP04733 61 aa4.01□□□□□ -1.77
SMARCD1-205ENST00000548573 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
SMARCD1-205ENST00000548573 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
SMARCD1-205ENST00000548573 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
SMARCD1-205ENST00000548573 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
SMARCD1-205ENST00000548573 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
SMARCD1-205ENST00000548573 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
SMARCD1-205ENST00000548573 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
SMARCD1-205ENST00000548573 MT1BP07438 61 aa3.91□□□□□ -1.78
SMARCD1-205ENST00000548573 RNF213Q63HN8 5207 aa3.91□□□□□ -1.78
SMARCD1-205ENST00000548573 MT1XP80297 61 aa3.91□□□□□ -1.78
SMARCD1-205ENST00000548573 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
SMARCD1-205ENST00000548573 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
SMARCD1-205ENST00000548573 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
SMARCD1-205ENST00000548573 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
SMARCD1-205ENST00000548573 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
SMARCD1-205ENST00000548573 INE1O15225 51 aa3.8□□□□□ -1.8
SMARCD1-205ENST00000548573 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
SMARCD1-205ENST00000548573 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
SMARCD1-205ENST00000548573 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
SMARCD1-205ENST00000548573 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
SMARCD1-205ENST00000548573 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms