RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 S4R3F8 94 aa7.85□□□□□ -1.15
BRF1-211ENST00000547530 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
BRF1-211ENST00000547530 TPRXLQ17RH7 258 aa7.84□□□□□ -1.16
BRF1-211ENST00000547530 PKD1P98161 4303 aa7.8□□□□□ -1.16
BRF1-211ENST00000547530 KRTAP21-3Q3LHN1 58 aa7.77□□□□□ -1.16
BRF1-211ENST00000547530 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
BRF1-211ENST00000547530 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
BRF1-211ENST00000547530 Q5VSD8 79 aa7.7□□□□□ -1.18
BRF1-211ENST00000547530 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
BRF1-211ENST00000547530 APOBP04114 4563 aaKnown RBP7.69□□□□□ -1.18
BRF1-211ENST00000547530 SACSQ9NZJ4 4579 aa7.69□□□□□ -1.18
BRF1-211ENST00000547530 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
BRF1-211ENST00000547530 HSPG2P98160 4391 aa7.66□□□□□ -1.18
BRF1-211ENST00000547530 XP32Q5T750 250 aa7.66□□□□□ -1.18
BRF1-211ENST00000547530 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
BRF1-211ENST00000547530 M0QZ58 72 aa7.6□□□□□ -1.19
BRF1-211ENST00000547530 KRTAP10-4P60372 401 aaPredicted RBP7.57□□□□□ -1.2
BRF1-211ENST00000547530 KMT2CQ8NEZ4 4911 aaKnown RBP7.56□□□□□ -1.2
BRF1-211ENST00000547530 LPAP08519 4548 aa7.56□□□□□ -1.2
BRF1-211ENST00000547530 LRP2P98164 4655 aa7.54□□□□□ -1.2
BRF1-211ENST00000547530 R4GN34 69 aa7.53□□□□□ -1.2
BRF1-211ENST00000547530 KIAA1109Q2LD37 5005 aa7.52□□□□□ -1.21
BRF1-211ENST00000547530 KRTAP12-1P59990 96 aa7.51□□□□□ -1.21
BRF1-211ENST00000547530 A0A1B0GVY2 172 aa7.5□□□□□ -1.21
BRF1-211ENST00000547530 RYR1P21817 5038 aa7.43□□□□□ -1.22
BRF1-211ENST00000547530 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.22
BRF1-211ENST00000547530 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
BRF1-211ENST00000547530 KRTAP17-1Q9BYP8 105 aa7.35□□□□□ -1.23
BRF1-211ENST00000547530 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
BRF1-211ENST00000547530 RYR3Q15413 4870 aa7.32□□□□□ -1.24
BRF1-211ENST00000547530 LORP23490 312 aaPredicted RBP7.29□□□□□ -1.24
BRF1-211ENST00000547530 MUC2Q02817 5179 aa7.24□□□□□ -1.25
BRF1-211ENST00000547530 RYR2Q92736 4967 aa7.24□□□□□ -1.25
BRF1-211ENST00000547530 EPPK1P58107 5090 aaKnown RBP7.22□□□□□ -1.25
BRF1-211ENST00000547530 PLAC4Q8WY50 150 aa7.21□□□□□ -1.25
BRF1-211ENST00000547530 ABCA13Q86UQ4 5058 aa7.21□□□□□ -1.26
BRF1-211ENST00000547530 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
BRF1-211ENST00000547530 J3QL48 77 aa7.16□□□□□ -1.26
BRF1-211ENST00000547530 TNXBP22105 4242 aa7.16□□□□□ -1.26
BRF1-211ENST00000547530 LUZP6Q538Z0 58 aa7.14□□□□□ -1.27
BRF1-211ENST00000547530 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
BRF1-211ENST00000547530 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
BRF1-211ENST00000547530 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.29
BRF1-211ENST00000547530 A0A0A0MQY5 61 aa6.9□□□□□ -1.31
BRF1-211ENST00000547530 M0R2T5 61 aa6.85□□□□□ -1.31
BRF1-211ENST00000547530 FAT4Q6V0I7 4981 aa6.83□□□□□ -1.32
BRF1-211ENST00000547530 TNP1P09430 55 aa6.77□□□□□ -1.33
BRF1-211ENST00000547530 RNF213Q63HN8 5207 aa6.72□□□□□ -1.33
BRF1-211ENST00000547530 HERC2O95714 4834 aa6.72□□□□□ -1.33
BRF1-211ENST00000547530 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
BRF1-211ENST00000547530 HERC1Q15751 4861 aa6.62□□□□□ -1.35
BRF1-211ENST00000547530 PCLOQ9Y6V0 5065 aa6.56□□□□□ -1.36
BRF1-211ENST00000547530 MUC17Q685J3 4493 aa6.54□□□□□ -1.36
BRF1-211ENST00000547530 HMCN2Q8NDA2 5059 aa6.48□□□□□ -1.37
BRF1-211ENST00000547530 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
BRF1-211ENST00000547530 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
BRF1-211ENST00000547530 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
BRF1-211ENST00000547530 UBR4Q5T4S7 5183 aa6.37□□□□□ -1.39
BRF1-211ENST00000547530 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
BRF1-211ENST00000547530 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
BRF1-211ENST00000547530 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
BRF1-211ENST00000547530 USH2AO75445 5202 aa6.17□□□□□ -1.42
BRF1-211ENST00000547530 KMT2DO14686 5537 aa6.14□□□□□ -1.43
BRF1-211ENST00000547530 MT1FP04733 61 aa6.12□□□□□ -1.43
BRF1-211ENST00000547530 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
BRF1-211ENST00000547530 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
BRF1-211ENST00000547530 MT1HP80294 61 aa6.04□□□□□ -1.44
BRF1-211ENST00000547530 MT2AP02795 61 aa6.04□□□□□ -1.44
BRF1-211ENST00000547530 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
BRF1-211ENST00000547530 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
BRF1-211ENST00000547530 SPRR5A0A1B0GTR4 108 aa6.01□□□□□ -1.45
BRF1-211ENST00000547530 KRTAP10-12P60413 245 aa6□□□□□ -1.45
BRF1-211ENST00000547530 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
BRF1-211ENST00000547530 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
BRF1-211ENST00000547530 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
BRF1-211ENST00000547530 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
BRF1-211ENST00000547530 MT1XP80297 61 aa5.85□□□□□ -1.47
BRF1-211ENST00000547530 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.48
BRF1-211ENST00000547530 KRTAP8-1Q8IUC2 63 aa5.83□□□□□ -1.48
BRF1-211ENST00000547530 MT1BP07438 61 aa5.81□□□□□ -1.48
BRF1-211ENST00000547530 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
BRF1-211ENST00000547530 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
BRF1-211ENST00000547530 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
BRF1-211ENST00000547530 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
BRF1-211ENST00000547530 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
BRF1-211ENST00000547530 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
BRF1-211ENST00000547530 INE1O15225 51 aa5.67□□□□□ -1.5
BRF1-211ENST00000547530 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
BRF1-211ENST00000547530 CRCT1Q9UGL9 99 aa5.61□□□□□ -1.51
BRF1-211ENST00000547530 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
BRF1-211ENST00000547530 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
BRF1-211ENST00000547530 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
BRF1-211ENST00000547530 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
BRF1-211ENST00000547530 LCE2BO14633 110 aa5.47□□□□□ -1.53
BRF1-211ENST00000547530 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.53
BRF1-211ENST00000547530 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
BRF1-211ENST00000547530 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
BRF1-211ENST00000547530 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
BRF1-211ENST00000547530 LCE2AQ5TA79 106 aaPredicted RBP5.2□□□□□ -1.58
BRF1-211ENST00000547530 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms