RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 SPTBN5Q9NRC6 3674 aaKnown RBP1.11□□□□□ -2.23
RAB3IP-209ENST00000547055 DCHS2Q6V1P9 2916 aa1.1□□□□□ -2.23
RAB3IP-209ENST00000547055 VWFP04275 2813 aa1.1□□□□□ -2.23
RAB3IP-209ENST00000547055 KRTAP12-1P59990 96 aa1.1□□□□□ -2.23
RAB3IP-209ENST00000547055 TPRXLQ17RH7 258 aa1.1□□□□□ -2.23
RAB3IP-209ENST00000547055 FLNCQ14315 2725 aa1.09□□□□□ -2.23
RAB3IP-209ENST00000547055 HECTD1Q9ULT8 2610 aa1.09□□□□□ -2.23
RAB3IP-209ENST00000547055 TNP1P09430 55 aa1.09□□□□□ -2.23
RAB3IP-209ENST00000547055 MYO15AQ9UKN7 3530 aa1.09□□□□□ -2.24
RAB3IP-209ENST00000547055 DMDP11532 3685 aa1.09□□□□□ -2.24
RAB3IP-209ENST00000547055 PKD1L1Q8TDX9 2849 aa1.08□□□□□ -2.24
RAB3IP-209ENST00000547055 ZANQ9Y493 2812 aa1.08□□□□□ -2.24
RAB3IP-209ENST00000547055 DCHS1Q96JQ0 3298 aa1.08□□□□□ -2.24
RAB3IP-209ENST00000547055 ITPR2Q14571 2701 aa1.08□□□□□ -2.24
RAB3IP-209ENST00000547055 SPENQ96T58 3664 aaKnown RBP1.08□□□□□ -2.24
RAB3IP-209ENST00000547055 COL6A5A8TX70 2615 aa1.08□□□□□ -2.24
RAB3IP-209ENST00000547055 SMG1Q96Q15 3661 aaKnown RBP1.08□□□□□ -2.24
RAB3IP-209ENST00000547055 TGP01266 2768 aa1.08□□□□□ -2.24
RAB3IP-209ENST00000547055 SRRM2Q9UQ35 2752 aaKnown RBP1.08□□□□□ -2.24
RAB3IP-209ENST00000547055 FLG2Q5D862 2391 aaPredicted RBP1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 FBN2P35556 2912 aa1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 HIVEP1P15822 2718 aa1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 TENM4Q6N022 2769 aa1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 NOTCH1P46531 2555 aa1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 STAB1Q9NY15 2570 aa1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 USP24Q9UPU5 2620 aa1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 OTOGQ6ZRI0 2925 aa1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 DMBT1Q9UGM3 2413 aaPredicted RBP1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 SPEGQ15772 3267 aa1.07□□□□□ -2.24
RAB3IP-209ENST00000547055 ZFHX4Q86UP3 3567 aa1.06□□□□□ -2.24
RAB3IP-209ENST00000547055 PDZD2O15018 2839 aa1.06□□□□□ -2.24
RAB3IP-209ENST00000547055 A0A0D9SG42 100 aa1.06□□□□□ -2.24
RAB3IP-209ENST00000547055 STAB2Q8WWQ8 2551 aa1.05□□□□□ -2.24
RAB3IP-209ENST00000547055 MAST4O15021 2626 aa1.05□□□□□ -2.24
RAB3IP-209ENST00000547055 MEGF8Q7Z7M0 2845 aa1.05□□□□□ -2.24
RAB3IP-209ENST00000547055 ASPMQ8IZT6 3477 aa1.05□□□□□ -2.24
RAB3IP-209ENST00000547055 IGSF10Q6WRI0 2623 aa1.05□□□□□ -2.24
RAB3IP-209ENST00000547055 NBPF19A0A087WUL8 3843 aa1.05□□□□□ -2.24
RAB3IP-209ENST00000547055 MGAM2Q2M2H8 2515 aa1.05□□□□□ -2.24
RAB3IP-209ENST00000547055 FBN3Q75N90 2809 aa1.04□□□□□ -2.24
RAB3IP-209ENST00000547055 CSMD1Q96PZ7 3565 aa1.03□□□□□ -2.24
RAB3IP-209ENST00000547055 EYSQ5T1H1 3165 aa1.03□□□□□ -2.24
RAB3IP-209ENST00000547055 SVEP1Q4LDE5 3571 aa1.03□□□□□ -2.24
RAB3IP-209ENST00000547055 FLNBO75369 2602 aaKnown RBP1.03□□□□□ -2.24
RAB3IP-209ENST00000547055 ALMS1Q8TCU4 4167 aa1.03□□□□□ -2.24
RAB3IP-209ENST00000547055 LAMA5O15230 3695 aa1.02□□□□□ -2.25
RAB3IP-209ENST00000547055 BSNQ9UPA5 3926 aa1.01□□□□□ -2.25
RAB3IP-209ENST00000547055 C10orf95Q9H7T3 257 aa1.01□□□□□ -2.25
RAB3IP-209ENST00000547055 SMR3AQ99954 134 aa1□□□□□ -2.25
RAB3IP-209ENST00000547055 COL7A1Q02388 2944 aa0.99□□□□□ -2.25
RAB3IP-209ENST00000547055 RELNP78509 3460 aa0.99□□□□□ -2.25
RAB3IP-209ENST00000547055 CSMD2Q7Z408 3487 aa0.98□□□□□ -2.25
RAB3IP-209ENST00000547055 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
RAB3IP-209ENST00000547055 MUC3AQ02505 3323 aa0.98□□□□□ -2.25
RAB3IP-209ENST00000547055 AKAP9Q99996 3911 aa0.98□□□□□ -2.25
RAB3IP-209ENST00000547055 VPS13CQ709C8 3753 aa0.98□□□□□ -2.25
RAB3IP-209ENST00000547055 TENM1Q9UKZ4 2725 aa0.97□□□□□ -2.25
RAB3IP-209ENST00000547055 TENM3Q9P273 2699 aa0.96□□□□□ -2.26
RAB3IP-209ENST00000547055 CUBNO60494 3623 aa0.93□□□□□ -2.26
RAB3IP-209ENST00000547055 TRRAPQ9Y4A5 3859 aa0.92□□□□□ -2.26
RAB3IP-209ENST00000547055 KRTAP8-1Q8IUC2 63 aa0.9□□□□□ -2.27
RAB3IP-209ENST00000547055 LYSTQ99698 3801 aa0.9□□□□□ -2.27
RAB3IP-209ENST00000547055 ANK2Q01484 3957 aa0.89□□□□□ -2.27
RAB3IP-209ENST00000547055 HECTD4Q9Y4D8 3996 aa0.89□□□□□ -2.27
RAB3IP-209ENST00000547055 M0R2T5 61 aa0.88□□□□□ -2.27
RAB3IP-209ENST00000547055 ZNF469Q96JG9 3925 aaPredicted RBP0.87□□□□□ -2.27
RAB3IP-209ENST00000547055 DNAH3Q8TD57 4116 aa0.87□□□□□ -2.27
RAB3IP-209ENST00000547055 KRTAP10-4P60372 401 aaPredicted RBP0.87□□□□□ -2.27
RAB3IP-209ENST00000547055 SMR3BP02814 79 aaPredicted RBP0.86□□□□□ -2.27
RAB3IP-209ENST00000547055 SPRR2GQ9BYE4 73 aa0.86□□□□□ -2.27
RAB3IP-209ENST00000547055 CSMD3Q7Z407 3707 aa0.85□□□□□ -2.27
RAB3IP-209ENST00000547055 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
RAB3IP-209ENST00000547055 DNAH7Q8WXX0 4024 aa0.83□□□□□ -2.28
RAB3IP-209ENST00000547055 VPS13BQ7Z7G8 4022 aa0.82□□□□□ -2.28
RAB3IP-209ENST00000547055 FRAS1Q86XX4 4008 aa0.82□□□□□ -2.28
RAB3IP-209ENST00000547055 ANK3Q12955 4377 aaKnown RBP0.81□□□□□ -2.28
RAB3IP-209ENST00000547055 KMT2AQ03164 3969 aa0.81□□□□□ -2.28
RAB3IP-209ENST00000547055 VPS13DQ5THJ4 4388 aa0.81□□□□□ -2.28
RAB3IP-209ENST00000547055 CMYA5Q8N3K9 4069 aa0.81□□□□□ -2.28
RAB3IP-209ENST00000547055 DNAH6Q9C0G6 4158 aa0.8□□□□□ -2.28
RAB3IP-209ENST00000547055 DNAH1Q9P2D7 4330 aa0.8□□□□□ -2.28
RAB3IP-209ENST00000547055 MT1HL1P0DM35 61 aa0.79□□□□□ -2.28
RAB3IP-209ENST00000547055 DYNC2H1Q8NCM8 4307 aaKnown RBP0.79□□□□□ -2.28
RAB3IP-209ENST00000547055 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
RAB3IP-209ENST00000547055 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
RAB3IP-209ENST00000547055 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
RAB3IP-209ENST00000547055 KRTAP2-1Q9BYU5 128 aa0.78□□□□□ -2.28
RAB3IP-209ENST00000547055 PRKDCP78527 4128 aaKnown RBP0.77□□□□□ -2.29
RAB3IP-209ENST00000547055 DNAH2Q9P225 4427 aa0.76□□□□□ -2.29
RAB3IP-209ENST00000547055 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
RAB3IP-209ENST00000547055 DNAH8Q96JB1 4490 aa0.76□□□□□ -2.29
RAB3IP-209ENST00000547055 PKHD1P08F94 4074 aa0.76□□□□□ -2.29
RAB3IP-209ENST00000547055 DNAH10Q8IVF4 4471 aa0.75□□□□□ -2.29
RAB3IP-209ENST00000547055 DNAH9Q9NYC9 4486 aa0.75□□□□□ -2.29
RAB3IP-209ENST00000547055 DNAH17Q9UFH2 4485 aa0.75□□□□□ -2.29
RAB3IP-209ENST00000547055 HUWE1Q7Z6Z7 4374 aaKnown RBP0.74□□□□□ -2.29
RAB3IP-209ENST00000547055 MT1AP04731 61 aa0.74□□□□□ -2.29
RAB3IP-209ENST00000547055 MT1EP04732 61 aa0.74□□□□□ -2.29
RAB3IP-209ENST00000547055 PKHD1L1Q86WI1 4243 aa0.74□□□□□ -2.29
RAB3IP-209ENST00000547055 DNAH11Q96DT5 4516 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms