RNA–Protein interactions for RNA: ENST00000546842.5

NR4A1-207, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-207ENST00000546842 SPRR2FQ96RM1 72 aa12.24□□□□□ -0.45
NR4A1-207ENST00000546842 K7EP34 96 aa12.23□□□□□ -0.45
NR4A1-207ENST00000546842 TRAV22A0A0B4J277 110 aa12.22□□□□□ -0.45
NR4A1-207ENST00000546842 LOC101927531A0A1B0GV80 90 aa12.22□□□□□ -0.45
NR4A1-207ENST00000546842 H0YAA0 97 aa12.21□□□□□ -0.45
NR4A1-207ENST00000546842 NDUFC1O43677 76 aa12.18□□□□□ -0.46
NR4A1-207ENST00000546842 SPRR2EP22531 72 aa12.18□□□□□ -0.46
NR4A1-207ENST00000546842 SPRR2BP35325 72 aa12.18□□□□□ -0.46
NR4A1-207ENST00000546842 SPRR2AP35326 72 aa12.18□□□□□ -0.46
NR4A1-207ENST00000546842 COL5A1-AS1Q5SY13 56 aa12.15□□□□□ -0.46
NR4A1-207ENST00000546842 MT1XP80297 61 aa12.13□□□□□ -0.47
NR4A1-207ENST00000546842 PRO2289Q9P1D8 64 aa12.13□□□□□ -0.47
NR4A1-207ENST00000546842 LOC105371267A0A1B0GV96 52 aa12.12□□□□□ -0.47
NR4A1-207ENST00000546842 A8MUN3 132 aa12.1□□□□□ -0.47
NR4A1-207ENST00000546842 ADM2Q7Z4H4 148 aa12.09□□□□□ -0.47
NR4A1-207ENST00000546842 ETDBQ3ZM63 59 aa12.03□□□□□ -0.48
NR4A1-207ENST00000546842 KRTAP8-1Q8IUC2 63 aa12.02□□□□□ -0.49
NR4A1-207ENST00000546842 H0Y9P7 68 aa11.97□□□□□ -0.49
NR4A1-207ENST00000546842 PLAC4Q8WY50 150 aa11.97□□□□□ -0.49
NR4A1-207ENST00000546842 F8W1H4 67 aa11.96□□□□□ -0.49
NR4A1-207ENST00000546842 ACYP1P07311 99 aa11.96□□□□□ -0.49
NR4A1-207ENST00000546842 LCE1AQ5T7P2 110 aa11.96□□□□□ -0.49
NR4A1-207ENST00000546842 GTF2H5Q6ZYL4 71 aa11.96□□□□□ -0.49
NR4A1-207ENST00000546842 UQCRQO14949 82 aa11.95□□□□□ -0.5
NR4A1-207ENST00000546842 ATOX1O00244 68 aa11.94□□□□□ -0.5
NR4A1-207ENST00000546842 KRTAP12-2P59991 146 aa11.9□□□□□ -0.5
NR4A1-207ENST00000546842 KRTAP2-2Q9BYT5 123 aa11.88□□□□□ -0.51
NR4A1-207ENST00000546842 KRTAP2-1Q9BYU5 128 aa11.88□□□□□ -0.51
NR4A1-207ENST00000546842 HIST1H4AP62805 103 aaKnown RBP11.83□□□□□ -0.52
NR4A1-207ENST00000546842 R4GN34 69 aa11.81□□□□□ -0.52
NR4A1-207ENST00000546842 ATP5EP2Q5VTU8 51 aa11.8□□□□□ -0.52
NR4A1-207ENST00000546842 SPRR2DP22532 72 aa11.78□□□□□ -0.52
NR4A1-207ENST00000546842 KRTAP4-8A0A0G2JLE6 195 aa11.77□□□□□ -0.53
NR4A1-207ENST00000546842 P0C880 135 aa11.77□□□□□ -0.53
NR4A1-207ENST00000546842 KRTAP4-8Q9BYQ9 185 aa11.77□□□□□ -0.53
NR4A1-207ENST00000546842 LINC00208Q96KT6 92 aa11.73□□□□□ -0.53
NR4A1-207ENST00000546842 M0QZ58 72 aa11.71□□□□□ -0.53
NR4A1-207ENST00000546842 FAM240AA0A1B0GVK7 77 aa11.68□□□□□ -0.54
NR4A1-207ENST00000546842 C20orf197Q8N268 126 aa11.68□□□□□ -0.54
NR4A1-207ENST00000546842 LINC01554Q52M75 96 aa11.58□□□□□ -0.56
NR4A1-207ENST00000546842 KRTAP10-7P60409 375 aaPredicted RBP11.57□□□□□ -0.56
NR4A1-207ENST00000546842 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
NR4A1-207ENST00000546842 MP68P56378 58 aa11.56□□□□□ -0.56
NR4A1-207ENST00000546842 OCR1Q9BZK8 76 aa11.53□□□□□ -0.56
NR4A1-207ENST00000546842 KRTAP10-12P60413 245 aa11.49□□□□□ -0.57
NR4A1-207ENST00000546842 LCE3BQ5TA77 95 aa11.49□□□□□ -0.57
NR4A1-207ENST00000546842 LINC00643Q86TS7 51 aa11.46□□□□□ -0.57
NR4A1-207ENST00000546842 DMAC1Q96GE9 116 aa11.45□□□□□ -0.58
NR4A1-207ENST00000546842 PCP4L1A6NKN8 68 aa11.43□□□□□ -0.58
NR4A1-207ENST00000546842 H3BPC8 53 aa11.32□□□□□ -0.6
NR4A1-207ENST00000546842 MT-ATP8P03928 68 aa11.22□□□□□ -0.61
NR4A1-207ENST00000546842 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
NR4A1-207ENST00000546842 SCGB1A1P11684 91 aa11.05□□□□□ -0.64
NR4A1-207ENST00000546842 ACYP2P14621 99 aa11.04□□□□□ -0.64
NR4A1-207ENST00000546842 SPTSSBQ8NFR3 76 aa11□□□□□ -0.65
NR4A1-207ENST00000546842 GPR98Q8WXG9 6306 aa10.98□□□□□ -0.65
NR4A1-207ENST00000546842 DSTQ03001 7570 aaKnown RBP10.89□□□□□ -0.67
NR4A1-207ENST00000546842 LCE5AQ5TCM9 118 aa10.88□□□□□ -0.67
NR4A1-207ENST00000546842 CHKB-CPT1BH3BT56 60 aa10.84□□□□□ -0.67
NR4A1-207ENST00000546842 KRTAP19-7Q3SYF9 63 aa10.84□□□□□ -0.67
NR4A1-207ENST00000546842 KRTAP4-9Q9BYQ8 210 aa10.84□□□□□ -0.67
NR4A1-207ENST00000546842 KRTAP13-4Q3LI77 160 aa10.8□□□□□ -0.68
NR4A1-207ENST00000546842 CAMK2N1Q7Z7J9 78 aa10.78□□□□□ -0.68
NR4A1-207ENST00000546842 A0A1B0GV90 55 aa10.77□□□□□ -0.69
NR4A1-207ENST00000546842 MT1EP04732 61 aa10.77□□□□□ -0.69
NR4A1-207ENST00000546842 KRTAP19-3Q7Z4W3 81 aa10.77□□□□□ -0.69
NR4A1-207ENST00000546842 J3QR89 54 aa10.75□□□□□ -0.69
NR4A1-207ENST00000546842 SMIM20Q8N5G0 67 aa10.6□□□□□ -0.71
NR4A1-207ENST00000546842 CYSTM1Q9H1C7 97 aa10.56□□□□□ -0.72
NR4A1-207ENST00000546842 LCE1DQ5T752 114 aa10.53□□□□□ -0.72
NR4A1-207ENST00000546842 SNURFQ9Y675 71 aa10.53□□□□□ -0.72
NR4A1-207ENST00000546842 A0A0D9SG42 100 aa10.44□□□□□ -0.74
NR4A1-207ENST00000546842 MT1GP13640 62 aa10.44□□□□□ -0.74
NR4A1-207ENST00000546842 KRTAP19-5Q3LI72 72 aa10.44□□□□□ -0.74
NR4A1-207ENST00000546842 SPANXA2-OT1Q8N9U9 137 aa10.43□□□□□ -0.74
NR4A1-207ENST00000546842 HMCN1Q96RW7 5635 aa10.41□□□□□ -0.74
NR4A1-207ENST00000546842 MT4P47944 62 aa10.35□□□□□ -0.75
NR4A1-207ENST00000546842 LCE4AQ5TA78 99 aa10.35□□□□□ -0.75
NR4A1-207ENST00000546842 PP632Q6XCG6 107 aa10.35□□□□□ -0.75
NR4A1-207ENST00000546842 MT1MQ8N339 61 aa10.29□□□□□ -0.76
NR4A1-207ENST00000546842 SPATA8Q6RVD6 105 aa10.26□□□□□ -0.77
NR4A1-207ENST00000546842 SPINT4Q6UDR6 99 aa10.26□□□□□ -0.77
NR4A1-207ENST00000546842 COA5Q86WW8 74 aa10.21□□□□□ -0.77
NR4A1-207ENST00000546842 MT1LQ93083 61 aa10.21□□□□□ -0.77
NR4A1-207ENST00000546842 AHNAK2Q8IVF2 5795 aa10.21□□□□□ -0.78
NR4A1-207ENST00000546842 SERP1Q9Y6X1 66 aa10.19□□□□□ -0.78
NR4A1-207ENST00000546842 SEC61GP60059 68 aa10.18□□□□□ -0.78
NR4A1-207ENST00000546842 KRTAP12-1P59990 96 aa10.16□□□□□ -0.78
NR4A1-207ENST00000546842 A0A1B0GU33 70 aa10.09□□□□□ -0.79
NR4A1-207ENST00000546842 K7ERU9 68 aa10.09□□□□□ -0.79
NR4A1-207ENST00000546842 KRTAP5-4Q6L8H1 288 aa10.09□□□□□ -0.79
NR4A1-207ENST00000546842 KRTAP4-3Q9BYR4 195 aa10.09□□□□□ -0.79
NR4A1-207ENST00000546842 SERP2Q8N6R1 65 aa10.08□□□□□ -0.8
NR4A1-207ENST00000546842 KRTAP5-10Q6L8G5 202 aa10.03□□□□□ -0.8
NR4A1-207ENST00000546842 KRTAP4-6Q9BYQ5 205 aa10.01□□□□□ -0.81
NR4A1-207ENST00000546842 C10orf95Q9H7T3 257 aa9.98□□□□□ -0.81
NR4A1-207ENST00000546842 LCE3AQ5TA76 89 aa9.95□□□□□ -0.82
NR4A1-207ENST00000546842 SMIM26A0A096LP01 95 aa9.8□□□□□ -0.84
NR4A1-207ENST00000546842 TNP1P09430 55 aa9.79□□□□□ -0.84
NR4A1-207ENST00000546842 A8MU10 97 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms