RNA–Protein interactions for RNA: ENST00000546136.5

SOX5-216, Transcript of SRY-box 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX5, Length 6,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-216ENST00000546136 DNAH3Q8TD57 4116 aa2.73□□□□□ -1.97
SOX5-216ENST00000546136 LORP23490 312 aaPredicted RBP2.73□□□□□ -1.97
SOX5-216ENST00000546136 DNAH9Q9NYC9 4486 aa2.73□□□□□ -1.97
SOX5-216ENST00000546136 LCE2BO14633 110 aa2.71□□□□□ -1.98
SOX5-216ENST00000546136 CSMD3Q7Z407 3707 aa2.68□□□□□ -1.98
SOX5-216ENST00000546136 STARD9Q9P2P6 4700 aa2.67□□□□□ -1.98
SOX5-216ENST00000546136 LYSTQ99698 3801 aa2.67□□□□□ -1.98
SOX5-216ENST00000546136 PLECQ15149 4684 aaKnown RBP2.67□□□□□ -1.98
SOX5-216ENST00000546136 LCE2CQ5TA81 110 aa2.66□□□□□ -1.98
SOX5-216ENST00000546136 LCE2AQ5TA79 106 aaPredicted RBP2.66□□□□□ -1.98
SOX5-216ENST00000546136 KRTAP12-1P59990 96 aa2.66□□□□□ -1.98
SOX5-216ENST00000546136 DNAH7Q8WXX0 4024 aa2.63□□□□□ -1.99
SOX5-216ENST00000546136 DNAH10Q8IVF4 4471 aa2.63□□□□□ -1.99
SOX5-216ENST00000546136 DNAH1Q9P2D7 4330 aa2.6□□□□□ -1.99
SOX5-216ENST00000546136 KMT2AQ03164 3969 aa2.59□□□□□ -1.99
SOX5-216ENST00000546136 KRTAP4-5Q9BYR2 181 aa2.59□□□□□ -1.99
SOX5-216ENST00000546136 HYDINQ4G0P3 5121 aa2.59□□□□□ -2
SOX5-216ENST00000546136 VPS13DQ5THJ4 4388 aa2.58□□□□□ -2
SOX5-216ENST00000546136 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
SOX5-216ENST00000546136 KRTAP10-12P60413 245 aa2.56□□□□□ -2
SOX5-216ENST00000546136 DYNC2H1Q8NCM8 4307 aaKnown RBP2.56□□□□□ -2
SOX5-216ENST00000546136 DNAH2Q9P225 4427 aa2.55□□□□□ -2
SOX5-216ENST00000546136 SRRM2Q9UQ35 2752 aaKnown RBP2.55□□□□□ -2
SOX5-216ENST00000546136 SACSQ9NZJ4 4579 aa2.54□□□□□ -2
SOX5-216ENST00000546136 KRTAP10-4P60372 401 aaPredicted RBP2.52□□□□□ -2.01
SOX5-216ENST00000546136 KRTAP8-1Q8IUC2 63 aa2.52□□□□□ -2.01
SOX5-216ENST00000546136 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
SOX5-216ENST00000546136 RYR2Q92736 4967 aa2.51□□□□□ -2.01
SOX5-216ENST00000546136 RYR3Q15413 4870 aa2.51□□□□□ -2.01
SOX5-216ENST00000546136 FRAS1Q86XX4 4008 aa2.5□□□□□ -2.01
SOX5-216ENST00000546136 DNAH17Q9UFH2 4485 aa2.5□□□□□ -2.01
SOX5-216ENST00000546136 DNAH6Q9C0G6 4158 aa2.48□□□□□ -2.01
SOX5-216ENST00000546136 ALMS1Q8TCU4 4167 aa2.48□□□□□ -2.01
SOX5-216ENST00000546136 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
SOX5-216ENST00000546136 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
SOX5-216ENST00000546136 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
SOX5-216ENST00000546136 FAT2Q9NYQ8 4349 aa2.47□□□□□ -2.01
SOX5-216ENST00000546136 DNAH5Q8TE73 4624 aa2.46□□□□□ -2.01
SOX5-216ENST00000546136 DYNC1H1Q14204 4646 aaKnown RBP2.46□□□□□ -2.02
SOX5-216ENST00000546136 LRP1BQ9NZR2 4599 aa2.46□□□□□ -2.02
SOX5-216ENST00000546136 HECTD4Q9Y4D8 3996 aa2.46□□□□□ -2.02
SOX5-216ENST00000546136 PKD1P98161 4303 aa2.45□□□□□ -2.02
SOX5-216ENST00000546136 KIAA1109Q2LD37 5005 aa2.45□□□□□ -2.02
SOX5-216ENST00000546136 FAT1Q14517 4588 aa2.44□□□□□ -2.02
SOX5-216ENST00000546136 DNAH8Q96JB1 4490 aa2.44□□□□□ -2.02
SOX5-216ENST00000546136 EPPK1P58107 5090 aaKnown RBP2.43□□□□□ -2.02
SOX5-216ENST00000546136 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
SOX5-216ENST00000546136 APOBP04114 4563 aaKnown RBP2.39□□□□□ -2.03
SOX5-216ENST00000546136 MT1HL1P0DM35 61 aa2.39□□□□□ -2.03
SOX5-216ENST00000546136 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
SOX5-216ENST00000546136 RYR1P21817 5038 aa2.37□□□□□ -2.03
SOX5-216ENST00000546136 KRTAP3-1Q9BYR8 98 aa2.35□□□□□ -2.03
SOX5-216ENST00000546136 LRP1Q07954 4544 aaKnown RBP2.35□□□□□ -2.03
SOX5-216ENST00000546136 HSPG2P98160 4391 aa2.34□□□□□ -2.03
SOX5-216ENST00000546136 SPRR2EP22531 72 aa2.34□□□□□ -2.04
SOX5-216ENST00000546136 SPRR2BP35325 72 aa2.34□□□□□ -2.04
SOX5-216ENST00000546136 SPRR2AP35326 72 aa2.34□□□□□ -2.04
SOX5-216ENST00000546136 MYCBP2O75592 4640 aa2.34□□□□□ -2.04
SOX5-216ENST00000546136 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
SOX5-216ENST00000546136 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
SOX5-216ENST00000546136 HERC2O95714 4834 aa2.28□□□□□ -2.04
SOX5-216ENST00000546136 FAT3Q8TDW7 4589 aa2.26□□□□□ -2.05
SOX5-216ENST00000546136 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
SOX5-216ENST00000546136 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
SOX5-216ENST00000546136 SPRR2DP22532 72 aa2.25□□□□□ -2.05
SOX5-216ENST00000546136 PCLOQ9Y6V0 5065 aa2.25□□□□□ -2.05
SOX5-216ENST00000546136 LCE3BQ5TA77 95 aa2.24□□□□□ -2.05
SOX5-216ENST00000546136 MT1HP80294 61 aa2.23□□□□□ -2.05
SOX5-216ENST00000546136 HERC1Q15751 4861 aa2.21□□□□□ -2.06
SOX5-216ENST00000546136 TNXBP22105 4242 aa2.2□□□□□ -2.06
SOX5-216ENST00000546136 LCE3CQ5T5A8 94 aa2.18□□□□□ -2.06
SOX5-216ENST00000546136 LRP2P98164 4655 aa2.18□□□□□ -2.06
SOX5-216ENST00000546136 LPAP08519 4548 aa2.17□□□□□ -2.06
SOX5-216ENST00000546136 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
SOX5-216ENST00000546136 KRTAP4-1Q9BYQ7 146 aa2.14□□□□□ -2.07
SOX5-216ENST00000546136 KRTAP19-5Q3LI72 72 aa2.13□□□□□ -2.07
SOX5-216ENST00000546136 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
SOX5-216ENST00000546136 MT3P25713 68 aa2.12□□□□□ -2.07
SOX5-216ENST00000546136 MT2AP02795 61 aa2.11□□□□□ -2.07
SOX5-216ENST00000546136 HMCN2Q8NDA2 5059 aa2.11□□□□□ -2.07
SOX5-216ENST00000546136 MUC2Q02817 5179 aa2.1□□□□□ -2.07
SOX5-216ENST00000546136 RNF213Q63HN8 5207 aa2.1□□□□□ -2.07
SOX5-216ENST00000546136 MT4P47944 62 aa2.09□□□□□ -2.07
SOX5-216ENST00000546136 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
SOX5-216ENST00000546136 UBR4Q5T4S7 5183 aa2.09□□□□□ -2.07
SOX5-216ENST00000546136 MT1FP04733 61 aa2.08□□□□□ -2.08
SOX5-216ENST00000546136 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
SOX5-216ENST00000546136 MT1GP13640 62 aa2.04□□□□□ -2.08
SOX5-216ENST00000546136 KRTAP19-4Q3LI73 84 aa2.03□□□□□ -2.08
SOX5-216ENST00000546136 LCE4AQ5TA78 99 aa2.03□□□□□ -2.08
SOX5-216ENST00000546136 FAT4Q6V0I7 4981 aa2.03□□□□□ -2.09
SOX5-216ENST00000546136 KRTAP19-1Q8IUB9 90 aa2.02□□□□□ -2.09
SOX5-216ENST00000546136 PRM1P04553 51 aa2□□□□□ -2.09
SOX5-216ENST00000546136 MUC17Q685J3 4493 aa1.98□□□□□ -2.09
SOX5-216ENST00000546136 KRTAP9-2Q9BYQ4 174 aa1.98□□□□□ -2.09
SOX5-216ENST00000546136 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
SOX5-216ENST00000546136 KRTAP19-2Q3LHN2 52 aa1.95□□□□□ -2.1
SOX5-216ENST00000546136 KRTAP9-6A0A140TA67 174 aa1.93□□□□□ -2.1
SOX5-216ENST00000546136 KRTAP4-8A0A0G2JLE6 195 aa1.93□□□□□ -2.1
SOX5-216ENST00000546136 KRTAP4-8Q9BYQ9 185 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms