RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 LIMD2Q9BT23 127 aa3.81□□□□□ -1.8
LDHA-223ENST00000545215 ORMDL1Q9P0S3 153 aa3.81□□□□□ -1.8
LDHA-223ENST00000545215 TRAV22A0A0B4J277 110 aa3.8□□□□□ -1.8
LDHA-223ENST00000545215 A6NN06 94 aa3.8□□□□□ -1.8
LDHA-223ENST00000545215 SPRR1BP22528 89 aa3.8□□□□□ -1.8
LDHA-223ENST00000545215 SPRR4Q96PI1 79 aa3.8□□□□□ -1.8
LDHA-223ENST00000545215 IGLV5-48A0A075B6I7 105 aa3.79□□□□□ -1.8
LDHA-223ENST00000545215 PDE6GP18545 87 aa3.79□□□□□ -1.8
LDHA-223ENST00000545215 LINC00483Q53H64 154 aa3.79□□□□□ -1.8
LDHA-223ENST00000545215 LINC01554Q52M75 96 aa3.78□□□□□ -1.8
LDHA-223ENST00000545215 Q6ZQY7 126 aa3.78□□□□□ -1.8
LDHA-223ENST00000545215 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
LDHA-223ENST00000545215 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
LDHA-223ENST00000545215 HCG22E2RYF7 251 aa3.76□□□□□ -1.81
LDHA-223ENST00000545215 PSPHP1O15172 72 aa3.76□□□□□ -1.81
LDHA-223ENST00000545215 NDUFB1O75438 58 aa3.76□□□□□ -1.81
LDHA-223ENST00000545215 SPTSSBQ8NFR3 76 aa3.76□□□□□ -1.81
LDHA-223ENST00000545215 RETNLBQ9BQ08 111 aa3.76□□□□□ -1.81
LDHA-223ENST00000545215 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
LDHA-223ENST00000545215 CHKB-CPT1BH3BT56 60 aa3.75□□□□□ -1.81
LDHA-223ENST00000545215 SSBP3-AS1Q7Z2R9 100 aa3.75□□□□□ -1.81
LDHA-223ENST00000545215 ST20-AS1Q8NBB2 130 aa3.75□□□□□ -1.81
LDHA-223ENST00000545215 DEFB105AQ8NG35 78 aa3.75□□□□□ -1.81
LDHA-223ENST00000545215 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
LDHA-223ENST00000545215 LOC110117498A0A087WWA1 95 aa3.74□□□□□ -1.81
LDHA-223ENST00000545215 BPY2O14599 106 aa3.74□□□□□ -1.81
LDHA-223ENST00000545215 LINC00313P59037 77 aa3.74□□□□□ -1.81
LDHA-223ENST00000545215 Q5VV11 94 aa3.74□□□□□ -1.81
LDHA-223ENST00000545215 SPAG11AQ6PDA7 123 aa3.74□□□□□ -1.81
LDHA-223ENST00000545215 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
LDHA-223ENST00000545215 C1orf64Q8NEQ6 169 aa3.73□□□□□ -1.81
LDHA-223ENST00000545215 A6NED7 52 aa3.72□□□□□ -1.81
LDHA-223ENST00000545215 DSCR10P59022 87 aa3.72□□□□□ -1.81
LDHA-223ENST00000545215 ANAPC11Q9NYG5 84 aa3.72□□□□□ -1.81
LDHA-223ENST00000545215 RPS29P62273 56 aaKnown RBP3.71□□□□□ -1.81
LDHA-223ENST00000545215 MOBPQ13875 183 aa3.71□□□□□ -1.81
LDHA-223ENST00000545215 KRTAP13-2Q52LG2 175 aa3.71□□□□□ -1.81
LDHA-223ENST00000545215 CASC2Q6XLA1 102 aa3.71□□□□□ -1.81
LDHA-223ENST00000545215 SPINK1P00995 79 aa3.7□□□□□ -1.82
LDHA-223ENST00000545215 LINC00304Q8N9R0 145 aa3.7□□□□□ -1.82
LDHA-223ENST00000545215 LOC101927531A0A1B0GV80 90 aa3.7□□□□□ -1.82
LDHA-223ENST00000545215 Q6ZQT0 140 aa3.7□□□□□ -1.82
LDHA-223ENST00000545215 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
LDHA-223ENST00000545215 A0A1B0GW54 56 aa3.68□□□□□ -1.82
LDHA-223ENST00000545215 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
LDHA-223ENST00000545215 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
LDHA-223ENST00000545215 IGFL1Q6UW32 110 aa3.67□□□□□ -1.82
LDHA-223ENST00000545215 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
LDHA-223ENST00000545215 IGHV6-1A0A0B4J1U7 121 aa3.65□□□□□ -1.83
LDHA-223ENST00000545215 KRTAP13-3Q3SY46 172 aa3.65□□□□□ -1.83
LDHA-223ENST00000545215 LINC00208Q96KT6 92 aa3.65□□□□□ -1.83
LDHA-223ENST00000545215 H3BPC8 53 aa3.64□□□□□ -1.83
LDHA-223ENST00000545215 ZCCHC13Q8WW36 166 aaKnown RBP3.64□□□□□ -1.83
LDHA-223ENST00000545215 A0A1W2PNM2 257 aa3.62□□□□□ -1.83
LDHA-223ENST00000545215 IGKV4-1P06312 121 aa3.62□□□□□ -1.83
LDHA-223ENST00000545215 CAMK2N1Q7Z7J9 78 aa3.61□□□□□ -1.83
LDHA-223ENST00000545215 A0A087WSZ3 146 aa3.6□□□□□ -1.83
LDHA-223ENST00000545215 A8MU10 97 aa3.6□□□□□ -1.83
LDHA-223ENST00000545215 COX6B2Q6YFQ2 88 aa3.6□□□□□ -1.83
LDHA-223ENST00000545215 LINC01558Q9Y6Z2 57 aa3.6□□□□□ -1.83
LDHA-223ENST00000545215 A0A0G2JQZ4 141 aa3.59□□□□□ -1.83
LDHA-223ENST00000545215 MT2AP02795 61 aa3.56□□□□□ -1.84
LDHA-223ENST00000545215 LINC00472Q9H8W2 130 aa3.55□□□□□ -1.84
LDHA-223ENST00000545215 H0Y9P7 68 aa3.53□□□□□ -1.84
LDHA-223ENST00000545215 MT1FP04733 61 aa3.53□□□□□ -1.84
LDHA-223ENST00000545215 COA5Q86WW8 74 aa3.52□□□□□ -1.85
LDHA-223ENST00000545215 Q96NJ1 140 aa3.52□□□□□ -1.85
LDHA-223ENST00000545215 A8MWP4 228 aa3.5□□□□□ -1.85
LDHA-223ENST00000545215 PCOTHQ58A44 107 aa3.5□□□□□ -1.85
LDHA-223ENST00000545215 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
LDHA-223ENST00000545215 ROMO1P60602 79 aa3.49□□□□□ -1.85
LDHA-223ENST00000545215 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
LDHA-223ENST00000545215 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
LDHA-223ENST00000545215 DEFB116Q30KQ4 102 aa3.47□□□□□ -1.85
LDHA-223ENST00000545215 Q8N9L7 120 aa3.47□□□□□ -1.85
LDHA-223ENST00000545215 C9orf92A6NGG3 77 aa3.46□□□□□ -1.85
LDHA-223ENST00000545215 SPRR2EP22531 72 aa3.46□□□□□ -1.85
LDHA-223ENST00000545215 SPRR2BP35325 72 aa3.46□□□□□ -1.85
LDHA-223ENST00000545215 SPRR2AP35326 72 aa3.46□□□□□ -1.85
LDHA-223ENST00000545215 SPINK7P58062 85 aa3.46□□□□□ -1.85
LDHA-223ENST00000545215 KRTAP10-12P60413 245 aa3.46□□□□□ -1.85
LDHA-223ENST00000545215 CSAG1Q6PB30 78 aa3.46□□□□□ -1.85
LDHA-223ENST00000545215 K7EQZ3 153 aa3.44□□□□□ -1.86
LDHA-223ENST00000545215 C8orf17Q9NRJ1 99 aa3.44□□□□□ -1.86
LDHA-223ENST00000545215 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
LDHA-223ENST00000545215 ADM2Q7Z4H4 148 aa3.44□□□□□ -1.86
LDHA-223ENST00000545215 C20orf166-AS1Q96NR2 134 aa3.44□□□□□ -1.86
LDHA-223ENST00000545215 A8MUU9 505 aa3.43□□□□□ -1.86
LDHA-223ENST00000545215 RPL37P61927 97 aaKnown RBP3.43□□□□□ -1.86
LDHA-223ENST00000545215 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
LDHA-223ENST00000545215 MMP24-AS1A0A0U1RRL7 71 aa3.42□□□□□ -1.86
LDHA-223ENST00000545215 UQCR11O14957 56 aa3.42□□□□□ -1.86
LDHA-223ENST00000545215 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
LDHA-223ENST00000545215 MRPL34Q9BQ48 92 aaKnown RBP3.42□□□□□ -1.86
LDHA-223ENST00000545215 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
LDHA-223ENST00000545215 K7ERS5 55 aa3.4□□□□□ -1.87
LDHA-223ENST00000545215 TP53AIP1Q9HCN2 124 aa3.39□□□□□ -1.87
LDHA-223ENST00000545215 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
LDHA-223ENST00000545215 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
LDHA-223ENST00000545215 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms