RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ACYP1P07311 99 aa7.26□□□□□ -1.25
DDX55-212ENST00000544738 KLKP1Q107X0 134 aa7.26□□□□□ -1.25
DDX55-212ENST00000544738 KRTAP19-8Q3LI54 63 aa7.26□□□□□ -1.25
DDX55-212ENST00000544738 MT1BP07438 61 aa7.25□□□□□ -1.25
DDX55-212ENST00000544738 PCP4L1A6NKN8 68 aa7.24□□□□□ -1.25
DDX55-212ENST00000544738 KRTAP3-3Q9BYR6 98 aa7.24□□□□□ -1.25
DDX55-212ENST00000544738 ATP5EP2Q5VTU8 51 aa7.21□□□□□ -1.26
DDX55-212ENST00000544738 KRTAP10-5P60370 271 aa7.2□□□□□ -1.26
DDX55-212ENST00000544738 FAM240AA0A1B0GVK7 77 aa7.19□□□□□ -1.26
DDX55-212ENST00000544738 CRIPTQ9P021 101 aa7.19□□□□□ -1.26
DDX55-212ENST00000544738 ATOX1O00244 68 aa7.17□□□□□ -1.26
DDX55-212ENST00000544738 UQCRQO14949 82 aa7.17□□□□□ -1.26
DDX55-212ENST00000544738 HIST1H4AP62805 103 aaKnown RBP7.16□□□□□ -1.26
DDX55-212ENST00000544738 KRTAP2-2Q9BYT5 123 aa7.16□□□□□ -1.26
DDX55-212ENST00000544738 KRTAP2-1Q9BYU5 128 aa7.16□□□□□ -1.26
DDX55-212ENST00000544738 A0A087WVE0 104 aa7.15□□□□□ -1.26
DDX55-212ENST00000544738 SPRR2EP22531 72 aa7.15□□□□□ -1.26
DDX55-212ENST00000544738 SPRR2BP35325 72 aa7.15□□□□□ -1.26
DDX55-212ENST00000544738 SPRR2AP35326 72 aa7.15□□□□□ -1.26
DDX55-212ENST00000544738 IMUPQ9GZP8 106 aa7.15□□□□□ -1.26
DDX55-212ENST00000544738 H0Y9P7 68 aa7.13□□□□□ -1.27
DDX55-212ENST00000544738 NDUFC1O43677 76 aa7.12□□□□□ -1.27
DDX55-212ENST00000544738 H0YAA0 97 aa7.09□□□□□ -1.27
DDX55-212ENST00000544738 SPRR2FQ96RM1 72 aa7.09□□□□□ -1.27
DDX55-212ENST00000544738 A8MUN3 132 aa7.07□□□□□ -1.28
DDX55-212ENST00000544738 LINC00643Q86TS7 51 aa7.05□□□□□ -1.28
DDX55-212ENST00000544738 GPR98Q8WXG9 6306 aa7.02□□□□□ -1.29
DDX55-212ENST00000544738 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
DDX55-212ENST00000544738 MP68P56378 58 aa6.99□□□□□ -1.29
DDX55-212ENST00000544738 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
DDX55-212ENST00000544738 OCR1Q9BZK8 76 aa6.95□□□□□ -1.3
DDX55-212ENST00000544738 LCE1AQ5T7P2 110 aa6.93□□□□□ -1.3
DDX55-212ENST00000544738 SPRR2DP22532 72 aa6.92□□□□□ -1.3
DDX55-212ENST00000544738 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
DDX55-212ENST00000544738 H3BPC8 53 aa6.88□□□□□ -1.31
DDX55-212ENST00000544738 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
DDX55-212ENST00000544738 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
DDX55-212ENST00000544738 KRTAP8-1Q8IUC2 63 aa6.84□□□□□ -1.31
DDX55-212ENST00000544738 R4GN34 69 aa6.84□□□□□ -1.31
DDX55-212ENST00000544738 A0A1B0GV90 55 aa6.82□□□□□ -1.32
DDX55-212ENST00000544738 J3QR89 54 aa6.82□□□□□ -1.32
DDX55-212ENST00000544738 SCGB1A1P11684 91 aa6.8□□□□□ -1.32
DDX55-212ENST00000544738 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
DDX55-212ENST00000544738 P0C880 135 aa6.78□□□□□ -1.32
DDX55-212ENST00000544738 MT1XP80297 61 aa6.78□□□□□ -1.32
DDX55-212ENST00000544738 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
DDX55-212ENST00000544738 M0QZ58 72 aa6.76□□□□□ -1.33
DDX55-212ENST00000544738 TRAV7A0A075B6U4 112 aa6.69□□□□□ -1.34
DDX55-212ENST00000544738 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
DDX55-212ENST00000544738 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
DDX55-212ENST00000544738 LINC01554Q52M75 96 aa6.66□□□□□ -1.34
DDX55-212ENST00000544738 ACYP2P14621 99 aa6.65□□□□□ -1.34
DDX55-212ENST00000544738 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
DDX55-212ENST00000544738 SPTSSBQ8NFR3 76 aa6.63□□□□□ -1.35
DDX55-212ENST00000544738 SMIM20Q8N5G0 67 aa6.61□□□□□ -1.35
DDX55-212ENST00000544738 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
DDX55-212ENST00000544738 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
DDX55-212ENST00000544738 MT-ATP8P03928 68 aa6.54□□□□□ -1.36
DDX55-212ENST00000544738 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
DDX55-212ENST00000544738 CHKB-CPT1BH3BT56 60 aa6.52□□□□□ -1.37
DDX55-212ENST00000544738 K7ERU9 68 aa6.49□□□□□ -1.37
DDX55-212ENST00000544738 KRTAP10-7P60409 375 aaPredicted RBP6.46□□□□□ -1.38
DDX55-212ENST00000544738 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
DDX55-212ENST00000544738 SNURFQ9Y675 71 aa6.42□□□□□ -1.38
DDX55-212ENST00000544738 SPANXA2-OT1Q8N9U9 137 aa6.4□□□□□ -1.38
DDX55-212ENST00000544738 SERP2Q8N6R1 65 aa6.31□□□□□ -1.4
DDX55-212ENST00000544738 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
DDX55-212ENST00000544738 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
DDX55-212ENST00000544738 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
DDX55-212ENST00000544738 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
DDX55-212ENST00000544738 AHNAK2Q8IVF2 5795 aa6.24□□□□□ -1.41
DDX55-212ENST00000544738 COA5Q86WW8 74 aa6.2□□□□□ -1.42
DDX55-212ENST00000544738 SEC61GP60059 68 aa6.19□□□□□ -1.42
DDX55-212ENST00000544738 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
DDX55-212ENST00000544738 MT4P47944 62 aa6.14□□□□□ -1.43
DDX55-212ENST00000544738 KRTAP5-10Q6L8G5 202 aa6.12□□□□□ -1.43
DDX55-212ENST00000544738 A0A0D9SG42 100 aa6.1□□□□□ -1.43
DDX55-212ENST00000544738 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
DDX55-212ENST00000544738 COX7CP15954 63 aa6.07□□□□□ -1.44
DDX55-212ENST00000544738 A0A1B0GU33 70 aa6.06□□□□□ -1.44
DDX55-212ENST00000544738 KRTAP19-7Q3SYF9 63 aa6.06□□□□□ -1.44
DDX55-212ENST00000544738 SPATA8Q6RVD6 105 aa6.06□□□□□ -1.44
DDX55-212ENST00000544738 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
DDX55-212ENST00000544738 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
DDX55-212ENST00000544738 MT1EP04732 61 aa6.02□□□□□ -1.45
DDX55-212ENST00000544738 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
DDX55-212ENST00000544738 H7BZZ5 65 aa6□□□□□ -1.45
DDX55-212ENST00000544738 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
DDX55-212ENST00000544738 KRTAP5-7Q6L8G8 165 aa5.96□□□□□ -1.46
DDX55-212ENST00000544738 CYSTM1Q9H1C7 97 aa5.94□□□□□ -1.46
DDX55-212ENST00000544738 SMIM26A0A096LP01 95 aa5.92□□□□□ -1.46
DDX55-212ENST00000544738 A0A1B0GU69 56 aa5.91□□□□□ -1.46
DDX55-212ENST00000544738 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
DDX55-212ENST00000544738 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
DDX55-212ENST00000544738 MT1GP13640 62 aa5.88□□□□□ -1.47
DDX55-212ENST00000544738 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
DDX55-212ENST00000544738 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
DDX55-212ENST00000544738 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
DDX55-212ENST00000544738 A8MU10 97 aa5.79□□□□□ -1.48
DDX55-212ENST00000544738 ANAPC13Q9BS18 74 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms