RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 K7EP34 96 aa2.83□□□□□ -1.96
CLIP1-217ENST00000543205 KRTAP25-1Q3LHN0 102 aa2.83□□□□□ -1.96
CLIP1-217ENST00000543205 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
CLIP1-217ENST00000543205 ASB16-AS1Q495Z4 193 aa2.82□□□□□ -1.96
CLIP1-217ENST00000543205 ATP11AUNQ6ZP68 121 aa2.82□□□□□ -1.96
CLIP1-217ENST00000543205 PDE6GP18545 87 aa2.81□□□□□ -1.96
CLIP1-217ENST00000543205 C14orf132Q9NPU4 83 aa2.81□□□□□ -1.96
CLIP1-217ENST00000543205 LOC110117498A0A087WWA1 95 aa2.81□□□□□ -1.96
CLIP1-217ENST00000543205 A0A1B0GU33 70 aa2.81□□□□□ -1.96
CLIP1-217ENST00000543205 OBSCN-AS1Q96MR7 158 aa2.81□□□□□ -1.96
CLIP1-217ENST00000543205 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
CLIP1-217ENST00000543205 KRTAP13-3Q3SY46 172 aa2.8□□□□□ -1.96
CLIP1-217ENST00000543205 C20orf166-AS1Q96NR2 134 aa2.8□□□□□ -1.96
CLIP1-217ENST00000543205 hDV103S1A0JD37 113 aa2.79□□□□□ -1.96
CLIP1-217ENST00000543205 C9orf92A6NGG3 77 aa2.79□□□□□ -1.96
CLIP1-217ENST00000543205 F8W1H4 67 aa2.79□□□□□ -1.96
CLIP1-217ENST00000543205 PRO0461Q9UI25 63 aa2.79□□□□□ -1.96
CLIP1-217ENST00000543205 Q96NJ1 140 aa2.78□□□□□ -1.96
CLIP1-217ENST00000543205 MUC2Q02817 5179 aa2.77□□□□□ -1.97
CLIP1-217ENST00000543205 IGKV4-1P06312 121 aa2.77□□□□□ -1.97
CLIP1-217ENST00000543205 P0C880 135 aa2.77□□□□□ -1.97
CLIP1-217ENST00000543205 COX7CP15954 63 aa2.76□□□□□ -1.97
CLIP1-217ENST00000543205 LINC00472Q9H8W2 130 aa2.76□□□□□ -1.97
CLIP1-217ENST00000543205 NREPQ16612 68 aa2.76□□□□□ -1.97
CLIP1-217ENST00000543205 ETDBQ3ZM63 59 aa2.75□□□□□ -1.97
CLIP1-217ENST00000543205 LPAP08519 4548 aa2.74□□□□□ -1.97
CLIP1-217ENST00000543205 NDUFB1O75438 58 aa2.74□□□□□ -1.97
CLIP1-217ENST00000543205 DSCR10P59022 87 aa2.73□□□□□ -1.97
CLIP1-217ENST00000543205 R4GN34 69 aa2.73□□□□□ -1.97
CLIP1-217ENST00000543205 UBL5Q9BZL1 73 aa2.72□□□□□ -1.97
CLIP1-217ENST00000543205 RPL37P61927 97 aaKnown RBP2.71□□□□□ -1.98
CLIP1-217ENST00000543205 LINC00846Q9NV44 126 aa2.71□□□□□ -1.98
CLIP1-217ENST00000543205 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
CLIP1-217ENST00000543205 PCOTHQ58A44 107 aa2.71□□□□□ -1.98
CLIP1-217ENST00000543205 IGKV3D-7A0A0C4DH55 119 aa2.7□□□□□ -1.98
CLIP1-217ENST00000543205 CASC2Q6XLA1 102 aa2.7□□□□□ -1.98
CLIP1-217ENST00000543205 FSIP2Q5CZC0 6907 aa2.7□□□□□ -1.98
CLIP1-217ENST00000543205 ACYP1P07311 99 aa2.69□□□□□ -1.98
CLIP1-217ENST00000543205 CRCT1Q9UGL9 99 aa2.69□□□□□ -1.98
CLIP1-217ENST00000543205 K7EQZ3 153 aa2.68□□□□□ -1.98
CLIP1-217ENST00000543205 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
CLIP1-217ENST00000543205 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
CLIP1-217ENST00000543205 Q8N9L7 120 aa2.67□□□□□ -1.98
CLIP1-217ENST00000543205 CYSTM1Q9H1C7 97 aa2.67□□□□□ -1.98
CLIP1-217ENST00000543205 MMP24-AS1A0A0U1RRL7 71 aa2.66□□□□□ -1.98
CLIP1-217ENST00000543205 TMEM254Q8TBM7 123 aa2.66□□□□□ -1.98
CLIP1-217ENST00000543205 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
CLIP1-217ENST00000543205 Q1T7F1 81 aa2.66□□□□□ -1.98
CLIP1-217ENST00000543205 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
CLIP1-217ENST00000543205 WFDC13Q8IUB5 93 aa2.65□□□□□ -1.99
CLIP1-217ENST00000543205 MRPL34Q9BQ48 92 aaKnown RBP2.65□□□□□ -1.99
CLIP1-217ENST00000543205 MUC17Q685J3 4493 aa2.65□□□□□ -1.99
CLIP1-217ENST00000543205 ATP5EP56381 51 aaPredicted RBP2.64□□□□□ -1.99
CLIP1-217ENST00000543205 ATP5EP2Q5VTU8 51 aa2.64□□□□□ -1.99
CLIP1-217ENST00000543205 HCG22E2RYF7 251 aa2.64□□□□□ -1.99
CLIP1-217ENST00000543205 HRES1P13985 223 aa2.64□□□□□ -1.99
CLIP1-217ENST00000543205 ZCCHC13Q8WW36 166 aaKnown RBP2.64□□□□□ -1.99
CLIP1-217ENST00000543205 LINC00643Q86TS7 51 aa2.63□□□□□ -1.99
CLIP1-217ENST00000543205 PRO2289Q9P1D8 64 aa2.62□□□□□ -1.99
CLIP1-217ENST00000543205 A8MU10 97 aa2.61□□□□□ -1.99
CLIP1-217ENST00000543205 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
CLIP1-217ENST00000543205 ATOX1O00244 68 aa2.61□□□□□ -1.99
CLIP1-217ENST00000543205 CSAG1Q6PB30 78 aa2.61□□□□□ -1.99
CLIP1-217ENST00000543205 COX6B2Q6YFQ2 88 aa2.6□□□□□ -1.99
CLIP1-217ENST00000543205 SPINK7P58062 85 aa2.59□□□□□ -1.99
CLIP1-217ENST00000543205 TP53AIP1Q9HCN2 124 aa2.59□□□□□ -2
CLIP1-217ENST00000543205 SERP2Q8N6R1 65 aa2.58□□□□□ -2
CLIP1-217ENST00000543205 A0A087WVE0 104 aa2.58□□□□□ -2
CLIP1-217ENST00000543205 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
CLIP1-217ENST00000543205 CDC42SE1Q9NRR8 79 aa2.57□□□□□ -2
CLIP1-217ENST00000543205 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
CLIP1-217ENST00000543205 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
CLIP1-217ENST00000543205 TRAV22A0A0B4J277 110 aa2.54□□□□□ -2
CLIP1-217ENST00000543205 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
CLIP1-217ENST00000543205 M0R2T5 61 aa2.54□□□□□ -2
CLIP1-217ENST00000543205 KRTAP10-5P60370 271 aa2.54□□□□□ -2
CLIP1-217ENST00000543205 MT1HP80294 61 aa2.54□□□□□ -2
CLIP1-217ENST00000543205 H7BZZ5 65 aa2.53□□□□□ -2
CLIP1-217ENST00000543205 CYP4F30PQ9H0H9 118 aa2.53□□□□□ -2
CLIP1-217ENST00000543205 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
CLIP1-217ENST00000543205 LOC101927531A0A1B0GV80 90 aa2.52□□□□□ -2.01
CLIP1-217ENST00000543205 H0Y9P7 68 aa2.52□□□□□ -2.01
CLIP1-217ENST00000543205 Q5VV11 94 aa2.52□□□□□ -2.01
CLIP1-217ENST00000543205 NDUFC1O43677 76 aa2.49□□□□□ -2.01
CLIP1-217ENST00000543205 H1FX-AS1Q4G0G2 97 aa2.49□□□□□ -2.01
CLIP1-217ENST00000543205 CHKB-CPT1BH3BT56 60 aa2.49□□□□□ -2.01
CLIP1-217ENST00000543205 LINC00208Q96KT6 92 aa2.49□□□□□ -2.01
CLIP1-217ENST00000543205 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
CLIP1-217ENST00000543205 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
CLIP1-217ENST00000543205 DMAC1Q96GE9 116 aa2.46□□□□□ -2.02
CLIP1-217ENST00000543205 KLKP1Q107X0 134 aa2.45□□□□□ -2.02
CLIP1-217ENST00000543205 C20orf197Q8N268 126 aa2.45□□□□□ -2.02
CLIP1-217ENST00000543205 S4R3F8 94 aa2.44□□□□□ -2.02
CLIP1-217ENST00000543205 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
CLIP1-217ENST00000543205 SNURFQ9Y675 71 aa2.41□□□□□ -2.02
CLIP1-217ENST00000543205 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.03
CLIP1-217ENST00000543205 MT2AP02795 61 aa2.39□□□□□ -2.03
CLIP1-217ENST00000543205 KRTAP10-10P60014 251 aa2.39□□□□□ -2.03
CLIP1-217ENST00000543205 MT1FP04733 61 aa2.38□□□□□ -2.03
CLIP1-217ENST00000543205 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms