RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 MMP24-AS1A0A0U1RRL7 71 aa2.22□□□□□ -2.05
NPIPB3-211ENST00000542953 NDUFB1O75438 58 aa2.22□□□□□ -2.05
NPIPB3-211ENST00000542953 BATFQ16520 125 aa2.22□□□□□ -2.05
NPIPB3-211ENST00000542953 Q6ZVQ6 151 aa2.22□□□□□ -2.05
NPIPB3-211ENST00000542953 A0A1W2PPM0 123 aa2.21□□□□□ -2.06
NPIPB3-211ENST00000542953 K7EQZ3 153 aa2.21□□□□□ -2.06
NPIPB3-211ENST00000542953 NREPQ16612 68 aa2.21□□□□□ -2.06
NPIPB3-211ENST00000542953 MTURNQ8N3F0 131 aa2.21□□□□□ -2.06
NPIPB3-211ENST00000542953 TSTD3H0UI37 97 aa2.2□□□□□ -2.06
NPIPB3-211ENST00000542953 H3BT86 120 aa2.2□□□□□ -2.06
NPIPB3-211ENST00000542953 SPRR2DP22532 72 aa2.2□□□□□ -2.06
NPIPB3-211ENST00000542953 LYRM7Q5U5X0 104 aa2.2□□□□□ -2.06
NPIPB3-211ENST00000542953 Q5W150 140 aa2.2□□□□□ -2.06
NPIPB3-211ENST00000542953 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
NPIPB3-211ENST00000542953 WFDC13Q8IUB5 93 aa2.2□□□□□ -2.06
NPIPB3-211ENST00000542953 TMEM254Q8TBM7 123 aa2.2□□□□□ -2.06
NPIPB3-211ENST00000542953 MRPL34Q9BQ48 92 aaKnown RBP2.2□□□□□ -2.06
NPIPB3-211ENST00000542953 A0A0A0MQY5 61 aa2.18□□□□□ -2.06
NPIPB3-211ENST00000542953 hDV103S1A0JD37 113 aa2.18□□□□□ -2.06
NPIPB3-211ENST00000542953 KRTAP19-8Q3LI54 63 aa2.18□□□□□ -2.06
NPIPB3-211ENST00000542953 Q8N9L7 120 aa2.18□□□□□ -2.06
NPIPB3-211ENST00000542953 PRO0461Q9UI25 63 aa2.18□□□□□ -2.06
NPIPB3-211ENST00000542953 BPY2O14599 106 aa2.17□□□□□ -2.06
NPIPB3-211ENST00000542953 Q5VV11 94 aa2.17□□□□□ -2.06
NPIPB3-211ENST00000542953 H1FX-AS1Q4G0G2 97 aa2.16□□□□□ -2.06
NPIPB3-211ENST00000542953 SPCS1Q9Y6A9 102 aa2.16□□□□□ -2.06
NPIPB3-211ENST00000542953 NDUFS5O43920 106 aa2.15□□□□□ -2.07
NPIPB3-211ENST00000542953 HCG22E2RYF7 251 aa2.14□□□□□ -2.07
NPIPB3-211ENST00000542953 CASC2Q6XLA1 102 aa2.14□□□□□ -2.07
NPIPB3-211ENST00000542953 K7EP34 96 aa2.13□□□□□ -2.07
NPIPB3-211ENST00000542953 C4orf26Q17RF5 130 aa2.13□□□□□ -2.07
NPIPB3-211ENST00000542953 COL5A1-AS1Q5SY13 56 aa2.13□□□□□ -2.07
NPIPB3-211ENST00000542953 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
NPIPB3-211ENST00000542953 C7orf65Q6ZTY9 151 aa2.13□□□□□ -2.07
NPIPB3-211ENST00000542953 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
NPIPB3-211ENST00000542953 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
NPIPB3-211ENST00000542953 CXCL6P80162 114 aa2.12□□□□□ -2.07
NPIPB3-211ENST00000542953 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
NPIPB3-211ENST00000542953 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
NPIPB3-211ENST00000542953 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
NPIPB3-211ENST00000542953 UBL5Q9BZL1 73 aa2.11□□□□□ -2.07
NPIPB3-211ENST00000542953 ETDBQ3ZM63 59 aa2.09□□□□□ -2.07
NPIPB3-211ENST00000542953 C5orf47Q569G3 176 aa2.09□□□□□ -2.07
NPIPB3-211ENST00000542953 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
NPIPB3-211ENST00000542953 F8W1H4 67 aa2.08□□□□□ -2.08
NPIPB3-211ENST00000542953 LCA10Q71F78 164 aa2.08□□□□□ -2.08
NPIPB3-211ENST00000542953 C1orf64Q8NEQ6 169 aa2.08□□□□□ -2.08
NPIPB3-211ENST00000542953 A0A087WVE0 104 aa2.07□□□□□ -2.08
NPIPB3-211ENST00000542953 GTF2H5Q6ZYL4 71 aa2.07□□□□□ -2.08
NPIPB3-211ENST00000542953 TP53AIP1Q9HCN2 124 aa2.07□□□□□ -2.08
NPIPB3-211ENST00000542953 PCP4L1A6NKN8 68 aa2.06□□□□□ -2.08
NPIPB3-211ENST00000542953 IMUPQ9GZP8 106 aa2.06□□□□□ -2.08
NPIPB3-211ENST00000542953 CYP4F30PQ9H0H9 118 aa2.06□□□□□ -2.08
NPIPB3-211ENST00000542953 S4R3F8 94 aa2.06□□□□□ -2.08
NPIPB3-211ENST00000542953 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
NPIPB3-211ENST00000542953 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
NPIPB3-211ENST00000542953 CSAG1Q6PB30 78 aa2.05□□□□□ -2.08
NPIPB3-211ENST00000542953 KRTAP12-2P59991 146 aa2.04□□□□□ -2.08
NPIPB3-211ENST00000542953 FAM236AA0A1B0GUQ0 79 aa2.03□□□□□ -2.08
NPIPB3-211ENST00000542953 FAM236BA0A1B0GV22 79 aa2.03□□□□□ -2.08
NPIPB3-211ENST00000542953 KLKP1Q107X0 134 aa2.03□□□□□ -2.08
NPIPB3-211ENST00000542953 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
NPIPB3-211ENST00000542953 TRAV22A0A0B4J277 110 aa2.02□□□□□ -2.09
NPIPB3-211ENST00000542953 LOC101927531A0A1B0GV80 90 aa2.02□□□□□ -2.09
NPIPB3-211ENST00000542953 FAM240AA0A1B0GVK7 77 aa2.02□□□□□ -2.09
NPIPB3-211ENST00000542953 ACYP1P07311 99 aa2.02□□□□□ -2.09
NPIPB3-211ENST00000542953 H0Y9P7 68 aa2□□□□□ -2.09
NPIPB3-211ENST00000542953 UQCRQO14949 82 aa2□□□□□ -2.09
NPIPB3-211ENST00000542953 MT1XP80297 61 aa2□□□□□ -2.09
NPIPB3-211ENST00000542953 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
NPIPB3-211ENST00000542953 HIST1H4AP62805 103 aaKnown RBP1.99□□□□□ -2.09
NPIPB3-211ENST00000542953 ATP5EP2Q5VTU8 51 aa1.99□□□□□ -2.09
NPIPB3-211ENST00000542953 H0YAA0 97 aa1.98□□□□□ -2.09
NPIPB3-211ENST00000542953 LINC00643Q86TS7 51 aa1.98□□□□□ -2.09
NPIPB3-211ENST00000542953 OCR1Q9BZK8 76 aa1.98□□□□□ -2.09
NPIPB3-211ENST00000542953 CRIPTQ9P021 101 aa1.98□□□□□ -2.09
NPIPB3-211ENST00000542953 A0A1B0GV90 55 aa1.97□□□□□ -2.09
NPIPB3-211ENST00000542953 ATOX1O00244 68 aa1.97□□□□□ -2.09
NPIPB3-211ENST00000542953 NDUFC1O43677 76 aa1.96□□□□□ -2.1
NPIPB3-211ENST00000542953 LINC00208Q96KT6 92 aa1.96□□□□□ -2.1
NPIPB3-211ENST00000542953 A8MUN3 132 aa1.95□□□□□ -2.1
NPIPB3-211ENST00000542953 ADM2Q7Z4H4 148 aa1.95□□□□□ -2.1
NPIPB3-211ENST00000542953 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
NPIPB3-211ENST00000542953 MT4P47944 62 aa1.94□□□□□ -2.1
NPIPB3-211ENST00000542953 P0C880 135 aa1.93□□□□□ -2.1
NPIPB3-211ENST00000542953 MP68P56378 58 aa1.92□□□□□ -2.1
NPIPB3-211ENST00000542953 H3BPC8 53 aa1.91□□□□□ -2.1
NPIPB3-211ENST00000542953 DMAC1Q96GE9 116 aa1.91□□□□□ -2.1
NPIPB3-211ENST00000542953 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
NPIPB3-211ENST00000542953 SEC61GP60059 68 aa1.88□□□□□ -2.11
NPIPB3-211ENST00000542953 R4GN34 69 aa1.88□□□□□ -2.11
NPIPB3-211ENST00000542953 J3QR89 54 aa1.87□□□□□ -2.11
NPIPB3-211ENST00000542953 M0QZ58 72 aa1.87□□□□□ -2.11
NPIPB3-211ENST00000542953 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
NPIPB3-211ENST00000542953 MT-ATP8P03928 68 aa1.87□□□□□ -2.11
NPIPB3-211ENST00000542953 SCGB1A1P11684 91 aa1.87□□□□□ -2.11
NPIPB3-211ENST00000542953 PLAC4Q8WY50 150 aa1.87□□□□□ -2.11
NPIPB3-211ENST00000542953 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
NPIPB3-211ENST00000542953 TRAV7A0A075B6U4 112 aa1.85□□□□□ -2.11
NPIPB3-211ENST00000542953 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms