RNA–Protein interactions for RNA: ENST00000542575.6

SLC1A5-203, Transcript of solute carrier family 1 member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A5, Length 2,882 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A5-203ENST00000542575 DMBT1Q9UGM3 2413 aaPredicted RBP10.87□□□□□ -0.67
SLC1A5-203ENST00000542575 LRP1Q07954 4544 aaKnown RBP10.82□□□□□ -0.68
SLC1A5-203ENST00000542575 FAT3Q8TDW7 4589 aa10.74□□□□□ -0.69
SLC1A5-203ENST00000542575 RYR2Q92736 4967 aa10.73□□□□□ -0.69
SLC1A5-203ENST00000542575 KMT2CQ8NEZ4 4911 aaKnown RBP10.72□□□□□ -0.69
SLC1A5-203ENST00000542575 KRTAP10-8P60410 259 aa10.7□□□□□ -0.7
SLC1A5-203ENST00000542575 TNXBP22105 4242 aa10.7□□□□□ -0.7
SLC1A5-203ENST00000542575 HSPG2P98160 4391 aa10.69□□□□□ -0.7
SLC1A5-203ENST00000542575 K7ERS5 55 aa10.67□□□□□ -0.7
SLC1A5-203ENST00000542575 RPL37P61927 97 aaKnown RBP10.66□□□□□ -0.7
SLC1A5-203ENST00000542575 MYCBP2O75592 4640 aa10.66□□□□□ -0.7
SLC1A5-203ENST00000542575 Q5VSD8 79 aa10.66□□□□□ -0.7
SLC1A5-203ENST00000542575 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.7
SLC1A5-203ENST00000542575 KRTAP15-1Q3LI76 137 aa10.64□□□□□ -0.71
SLC1A5-203ENST00000542575 XP32Q5T750 250 aa10.62□□□□□ -0.71
SLC1A5-203ENST00000542575 KRTAP10-6P60371 365 aaPredicted RBP10.59□□□□□ -0.71
SLC1A5-203ENST00000542575 S4R3F8 94 aa10.55□□□□□ -0.72
SLC1A5-203ENST00000542575 A0A0D9SG42 100 aa10.55□□□□□ -0.72
SLC1A5-203ENST00000542575 LUZP6Q538Z0 58 aa10.54□□□□□ -0.72
SLC1A5-203ENST00000542575 KRTAP13-4Q3LI77 160 aa10.53□□□□□ -0.72
SLC1A5-203ENST00000542575 TPRXLQ17RH7 258 aa10.52□□□□□ -0.73
SLC1A5-203ENST00000542575 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
SLC1A5-203ENST00000542575 KRTAP17-1Q9BYP8 105 aa10.43□□□□□ -0.74
SLC1A5-203ENST00000542575 C10orf95Q9H7T3 257 aa10.43□□□□□ -0.74
SLC1A5-203ENST00000542575 RYR3Q15413 4870 aa10.4□□□□□ -0.74
SLC1A5-203ENST00000542575 RYR1P21817 5038 aa10.35□□□□□ -0.75
SLC1A5-203ENST00000542575 MT1HL1P0DM35 61 aa10.34□□□□□ -0.75
SLC1A5-203ENST00000542575 LPAP08519 4548 aa10.32□□□□□ -0.76
SLC1A5-203ENST00000542575 KIAA1109Q2LD37 5005 aa10.3□□□□□ -0.76
SLC1A5-203ENST00000542575 LRP2P98164 4655 aa10.25□□□□□ -0.77
SLC1A5-203ENST00000542575 KRTAP12-2P59991 146 aa10.2□□□□□ -0.78
SLC1A5-203ENST00000542575 KRTAP12-1P59990 96 aa10.1□□□□□ -0.79
SLC1A5-203ENST00000542575 EPPK1P58107 5090 aaKnown RBP10.04□□□□□ -0.8
SLC1A5-203ENST00000542575 M0QZ58 72 aa10.02□□□□□ -0.8
SLC1A5-203ENST00000542575 SEC61BP60468 96 aaKnown RBP10□□□□□ -0.81
SLC1A5-203ENST00000542575 ABCA13Q86UQ4 5058 aa9.97□□□□□ -0.81
SLC1A5-203ENST00000542575 KRTAP4-5Q9BYR2 181 aa9.89□□□□□ -0.83
SLC1A5-203ENST00000542575 R4GN34 69 aa9.85□□□□□ -0.83
SLC1A5-203ENST00000542575 LORP23490 312 aaPredicted RBP9.71□□□□□ -0.85
SLC1A5-203ENST00000542575 KRTAP4-1Q9BYQ7 146 aa9.69□□□□□ -0.86
SLC1A5-203ENST00000542575 MUC17Q685J3 4493 aa9.69□□□□□ -0.86
SLC1A5-203ENST00000542575 PLAC4Q8WY50 150 aa9.63□□□□□ -0.87
SLC1A5-203ENST00000542575 J3QL48 77 aa9.61□□□□□ -0.87
SLC1A5-203ENST00000542575 KRTAP19-2Q3LHN2 52 aa9.46□□□□□ -0.9
SLC1A5-203ENST00000542575 MUC2Q02817 5179 aa9.43□□□□□ -0.9
SLC1A5-203ENST00000542575 HERC2O95714 4834 aa9.43□□□□□ -0.9
SLC1A5-203ENST00000542575 BIRC6Q9NR09 4857 aa9.4□□□□□ -0.9
SLC1A5-203ENST00000542575 CAMK2N1Q7Z7J9 78 aa9.38□□□□□ -0.91
SLC1A5-203ENST00000542575 FLGP20930 4061 aaPredicted RBP9.22□□□□□ -0.93
SLC1A5-203ENST00000542575 PCLOQ9Y6V0 5065 aa9.21□□□□□ -0.93
SLC1A5-203ENST00000542575 PP632Q6XCG6 107 aa9.14□□□□□ -0.95
SLC1A5-203ENST00000542575 HERC1Q15751 4861 aa9.08□□□□□ -0.96
SLC1A5-203ENST00000542575 PRO2289Q9P1D8 64 aa9.03□□□□□ -0.96
SLC1A5-203ENST00000542575 TNP1P09430 55 aa8.99□□□□□ -0.97
SLC1A5-203ENST00000542575 FAT4Q6V0I7 4981 aa8.94□□□□□ -0.98
SLC1A5-203ENST00000542575 LCE2CQ5TA81 110 aa8.87□□□□□ -0.99
SLC1A5-203ENST00000542575 HMCN2Q8NDA2 5059 aa8.85□□□□□ -0.99
SLC1A5-203ENST00000542575 M0R2T5 61 aa8.82□□□□□ -1
SLC1A5-203ENST00000542575 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
SLC1A5-203ENST00000542575 KRTAP23-1A1A580 65 aa8.76□□□□□ -1.01
SLC1A5-203ENST00000542575 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
SLC1A5-203ENST00000542575 RNF213Q63HN8 5207 aa8.66□□□□□ -1.02
SLC1A5-203ENST00000542575 MT1HP80294 61 aa8.64□□□□□ -1.03
SLC1A5-203ENST00000542575 SPRR5A0A1B0GTR4 108 aa8.62□□□□□ -1.03
SLC1A5-203ENST00000542575 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
SLC1A5-203ENST00000542575 UBR4Q5T4S7 5183 aa8.58□□□□□ -1.04
SLC1A5-203ENST00000542575 MT1FP04733 61 aa8.56□□□□□ -1.04
SLC1A5-203ENST00000542575 INE1O15225 51 aa8.56□□□□□ -1.04
SLC1A5-203ENST00000542575 MT2AP02795 61 aa8.54□□□□□ -1.04
SLC1A5-203ENST00000542575 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
SLC1A5-203ENST00000542575 KRTAP9-8Q9BYQ0 159 aa8.46□□□□□ -1.05
SLC1A5-203ENST00000542575 KRTAP19-8Q3LI54 63 aa8.34□□□□□ -1.07
SLC1A5-203ENST00000542575 MT1BP07438 61 aa8.28□□□□□ -1.08
SLC1A5-203ENST00000542575 KRTAP10-5P60370 271 aa8.26□□□□□ -1.09
SLC1A5-203ENST00000542575 MT1XP80297 61 aa8.24□□□□□ -1.09
SLC1A5-203ENST00000542575 KRTAP8-1Q8IUC2 63 aa8.24□□□□□ -1.09
SLC1A5-203ENST00000542575 KRTAP10-12P60413 245 aa8.13□□□□□ -1.11
SLC1A5-203ENST00000542575 KRTAP12-3P60328 96 aa8.1□□□□□ -1.11
SLC1A5-203ENST00000542575 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
SLC1A5-203ENST00000542575 KRTAP10-7P60409 375 aaPredicted RBP8.07□□□□□ -1.12
SLC1A5-203ENST00000542575 LCE2BO14633 110 aa7.79□□□□□ -1.16
SLC1A5-203ENST00000542575 USH2AO75445 5202 aa7.78□□□□□ -1.16
SLC1A5-203ENST00000542575 KRTAP19-5Q3LI72 72 aa7.73□□□□□ -1.17
SLC1A5-203ENST00000542575 KMT2DO14686 5537 aa7.72□□□□□ -1.17
SLC1A5-203ENST00000542575 LCE3CQ5T5A8 94 aa7.6□□□□□ -1.19
SLC1A5-203ENST00000542575 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
SLC1A5-203ENST00000542575 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
SLC1A5-203ENST00000542575 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
SLC1A5-203ENST00000542575 KRTAP9-6A8MVA2 160 aa7.37□□□□□ -1.23
SLC1A5-203ENST00000542575 KRTAP19-7Q3SYF9 63 aa7.34□□□□□ -1.23
SLC1A5-203ENST00000542575 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
SLC1A5-203ENST00000542575 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
SLC1A5-203ENST00000542575 MT1LQ93083 61 aa7.14□□□□□ -1.27
SLC1A5-203ENST00000542575 MT1EP04732 61 aa7.12□□□□□ -1.27
SLC1A5-203ENST00000542575 KRTAP2-3P0C7H8 128 aa7.06□□□□□ -1.28
SLC1A5-203ENST00000542575 KRTAP2-4Q9BYR9 128 aa7.06□□□□□ -1.28
SLC1A5-203ENST00000542575 KRTAP2-1Q9BYU5 128 aa7.06□□□□□ -1.28
SLC1A5-203ENST00000542575 SSPOA2VEC9 5147 aa7.06□□□□□ -1.28
SLC1A5-203ENST00000542575 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
SLC1A5-203ENST00000542575 KRTAP19-6Q3LI70 58 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms