RNA–Protein interactions for RNA: ENST00000542447.6

CADM1-212, Transcript of cell adhesion molecule 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CADM1, Length 4,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-212ENST00000542447 RPS29P62273 56 aaKnown RBP5.88□□□□□ -1.47
CADM1-212ENST00000542447 DNAH17Q9UFH2 4485 aa5.88□□□□□ -1.47
CADM1-212ENST00000542447 RYR2Q92736 4967 aa5.87□□□□□ -1.47
CADM1-212ENST00000542447 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
CADM1-212ENST00000542447 KRTAP10-8P60410 259 aa5.87□□□□□ -1.47
CADM1-212ENST00000542447 J3QL48 77 aa5.87□□□□□ -1.47
CADM1-212ENST00000542447 VPS13DQ5THJ4 4388 aa5.85□□□□□ -1.47
CADM1-212ENST00000542447 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
CADM1-212ENST00000542447 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
CADM1-212ENST00000542447 Q5VSD8 79 aa5.81□□□□□ -1.48
CADM1-212ENST00000542447 LRP1BQ9NZR2 4599 aa5.8□□□□□ -1.48
CADM1-212ENST00000542447 KRTAP12-1P59990 96 aa5.79□□□□□ -1.48
CADM1-212ENST00000542447 DYNC2H1Q8NCM8 4307 aaKnown RBP5.78□□□□□ -1.48
CADM1-212ENST00000542447 DNAH2Q9P225 4427 aa5.78□□□□□ -1.48
CADM1-212ENST00000542447 XP32Q5T750 250 aa5.78□□□□□ -1.48
CADM1-212ENST00000542447 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
CADM1-212ENST00000542447 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
CADM1-212ENST00000542447 DNAH6Q9C0G6 4158 aa5.72□□□□□ -1.49
CADM1-212ENST00000542447 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
CADM1-212ENST00000542447 FAT1Q14517 4588 aa5.69□□□□□ -1.5
CADM1-212ENST00000542447 HECTD4Q9Y4D8 3996 aa5.66□□□□□ -1.5
CADM1-212ENST00000542447 A0A1B0GVY2 172 aa5.66□□□□□ -1.5
CADM1-212ENST00000542447 FAT2Q9NYQ8 4349 aa5.64□□□□□ -1.51
CADM1-212ENST00000542447 DNAH5Q8TE73 4624 aa5.64□□□□□ -1.51
CADM1-212ENST00000542447 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
CADM1-212ENST00000542447 DYNC1H1Q14204 4646 aaKnown RBP5.63□□□□□ -1.51
CADM1-212ENST00000542447 PKD1P98161 4303 aa5.59□□□□□ -1.51
CADM1-212ENST00000542447 BIRC6Q9NR09 4857 aa5.57□□□□□ -1.52
CADM1-212ENST00000542447 KRTAP4-5Q9BYR2 181 aa5.56□□□□□ -1.52
CADM1-212ENST00000542447 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
CADM1-212ENST00000542447 APOBP04114 4563 aaKnown RBP5.53□□□□□ -1.52
CADM1-212ENST00000542447 RYR1P21817 5038 aa5.49□□□□□ -1.53
CADM1-212ENST00000542447 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
CADM1-212ENST00000542447 TNP1P09430 55 aa5.46□□□□□ -1.54
CADM1-212ENST00000542447 HSPG2P98160 4391 aa5.45□□□□□ -1.54
CADM1-212ENST00000542447 HERC2O95714 4834 aa5.44□□□□□ -1.54
CADM1-212ENST00000542447 M0R2T5 61 aa5.44□□□□□ -1.54
CADM1-212ENST00000542447 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
CADM1-212ENST00000542447 PCLOQ9Y6V0 5065 aa5.44□□□□□ -1.54
CADM1-212ENST00000542447 FAT3Q8TDW7 4589 aa5.43□□□□□ -1.54
CADM1-212ENST00000542447 LRP1Q07954 4544 aaKnown RBP5.41□□□□□ -1.54
CADM1-212ENST00000542447 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
CADM1-212ENST00000542447 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
CADM1-212ENST00000542447 LCE2BO14633 110 aa5.38□□□□□ -1.55
CADM1-212ENST00000542447 KRTAP10-4P60372 401 aaPredicted RBP5.38□□□□□ -1.55
CADM1-212ENST00000542447 HERC1Q15751 4861 aa5.3□□□□□ -1.56
CADM1-212ENST00000542447 LRP2P98164 4655 aa5.22□□□□□ -1.57
CADM1-212ENST00000542447 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
CADM1-212ENST00000542447 LCE2CQ5TA81 110 aa5.16□□□□□ -1.58
CADM1-212ENST00000542447 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
CADM1-212ENST00000542447 UBR4Q5T4S7 5183 aa5.06□□□□□ -1.6
CADM1-212ENST00000542447 LPAP08519 4548 aa5.03□□□□□ -1.6
CADM1-212ENST00000542447 PRO2289Q9P1D8 64 aa5.03□□□□□ -1.6
CADM1-212ENST00000542447 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
CADM1-212ENST00000542447 RNF213Q63HN8 5207 aa5.03□□□□□ -1.6
CADM1-212ENST00000542447 TNXBP22105 4242 aa5□□□□□ -1.61
CADM1-212ENST00000542447 KRTAP10-10P60014 251 aa5□□□□□ -1.61
CADM1-212ENST00000542447 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
CADM1-212ENST00000542447 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
CADM1-212ENST00000542447 MUC2Q02817 5179 aa4.95□□□□□ -1.62
CADM1-212ENST00000542447 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
CADM1-212ENST00000542447 INE1O15225 51 aa4.86□□□□□ -1.63
CADM1-212ENST00000542447 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
CADM1-212ENST00000542447 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
CADM1-212ENST00000542447 FAT4Q6V0I7 4981 aa4.73□□□□□ -1.65
CADM1-212ENST00000542447 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
CADM1-212ENST00000542447 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
CADM1-212ENST00000542447 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
CADM1-212ENST00000542447 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
CADM1-212ENST00000542447 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
CADM1-212ENST00000542447 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
CADM1-212ENST00000542447 MT1FP04733 61 aa4.45□□□□□ -1.7
CADM1-212ENST00000542447 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
CADM1-212ENST00000542447 CRCT1Q9UGL9 99 aa4.44□□□□□ -1.7
CADM1-212ENST00000542447 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
CADM1-212ENST00000542447 MT2AP02795 61 aa4.42□□□□□ -1.7
CADM1-212ENST00000542447 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
CADM1-212ENST00000542447 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
CADM1-212ENST00000542447 MT1HP80294 61 aa4.38□□□□□ -1.71
CADM1-212ENST00000542447 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
CADM1-212ENST00000542447 MT1XP80297 61 aa4.29□□□□□ -1.72
CADM1-212ENST00000542447 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
CADM1-212ENST00000542447 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
CADM1-212ENST00000542447 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
CADM1-212ENST00000542447 USH2AO75445 5202 aa4.22□□□□□ -1.73
CADM1-212ENST00000542447 MT1BP07438 61 aa4.21□□□□□ -1.74
CADM1-212ENST00000542447 KMT2DO14686 5537 aa4.2□□□□□ -1.74
CADM1-212ENST00000542447 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
CADM1-212ENST00000542447 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
CADM1-212ENST00000542447 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
CADM1-212ENST00000542447 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
CADM1-212ENST00000542447 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.74
CADM1-212ENST00000542447 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
CADM1-212ENST00000542447 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
CADM1-212ENST00000542447 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
CADM1-212ENST00000542447 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
CADM1-212ENST00000542447 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
CADM1-212ENST00000542447 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
CADM1-212ENST00000542447 KRTAP9-3Q9BYQ3 159 aa3.99□□□□□ -1.77
CADM1-212ENST00000542447 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms