RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 APLNQ9ULZ1 77 aa0.5□□□□□ -2.33
SRGAP1-204ENST00000542381 HUWE1Q7Z6Z7 4374 aaKnown RBP0.5□□□□□ -2.33
SRGAP1-204ENST00000542381 MYCBP2O75592 4640 aa0.49□□□□□ -2.33
SRGAP1-204ENST00000542381 HRNRQ86YZ3 2850 aaPredicted RBP0.49□□□□□ -2.33
SRGAP1-204ENST00000542381 KMT2DO14686 5537 aa0.49□□□□□ -2.33
SRGAP1-204ENST00000542381 SFTA3P0C7M3 94 aa0.49□□□□□ -2.33
SRGAP1-204ENST00000542381 ENHOQ6UWT2 76 aa0.49□□□□□ -2.33
SRGAP1-204ENST00000542381 GNG13Q9P2W3 67 aa0.49□□□□□ -2.33
SRGAP1-204ENST00000542381 DNAH7Q8WXX0 4024 aa0.49□□□□□ -2.33
SRGAP1-204ENST00000542381 FAT1Q14517 4588 aa0.48□□□□□ -2.33
SRGAP1-204ENST00000542381 CCL22O00626 93 aa0.48□□□□□ -2.33
SRGAP1-204ENST00000542381 COX6B2Q6YFQ2 88 aa0.48□□□□□ -2.33
SRGAP1-204ENST00000542381 KCNQ1DNQ9H478 68 aa0.48□□□□□ -2.33
SRGAP1-204ENST00000542381 HMCN2Q8NDA2 5059 aa0.47□□□□□ -2.33
SRGAP1-204ENST00000542381 LRP2P98164 4655 aa0.47□□□□□ -2.33
SRGAP1-204ENST00000542381 DYNC1H1Q14204 4646 aaKnown RBP0.47□□□□□ -2.33
SRGAP1-204ENST00000542381 DNAH9Q9NYC9 4486 aa0.47□□□□□ -2.33
SRGAP1-204ENST00000542381 H1FX-AS1Q4G0G2 97 aa0.47□□□□□ -2.33
SRGAP1-204ENST00000542381 HSPG2P98160 4391 aa0.47□□□□□ -2.33
SRGAP1-204ENST00000542381 STARD9Q9P2P6 4700 aa0.47□□□□□ -2.33
SRGAP1-204ENST00000542381 PKD1P98161 4303 aa0.47□□□□□ -2.33
SRGAP1-204ENST00000542381 SPINK4O60575 86 aa0.46□□□□□ -2.34
SRGAP1-204ENST00000542381 FAT3Q8TDW7 4589 aa0.45□□□□□ -2.34
SRGAP1-204ENST00000542381 DEFB131BA0A096LNP1 70 aa0.45□□□□□ -2.34
SRGAP1-204ENST00000542381 LINC01549A6NIU2 74 aa0.45□□□□□ -2.34
SRGAP1-204ENST00000542381 NDUFA3O95167 84 aa0.45□□□□□ -2.34
SRGAP1-204ENST00000542381 TNXBP22105 4242 aa0.45□□□□□ -2.34
SRGAP1-204ENST00000542381 DNAH10Q8IVF4 4471 aa0.45□□□□□ -2.34
SRGAP1-204ENST00000542381 FAT2Q9NYQ8 4349 aa0.45□□□□□ -2.34
SRGAP1-204ENST00000542381 FSIP2Q5CZC0 6907 aa0.44□□□□□ -2.34
SRGAP1-204ENST00000542381 SSPOA2VEC9 5147 aa0.44□□□□□ -2.34
SRGAP1-204ENST00000542381 LRP1BQ9NZR2 4599 aa0.44□□□□□ -2.34
SRGAP1-204ENST00000542381 UBL5Q9BZL1 73 aa0.44□□□□□ -2.34
SRGAP1-204ENST00000542381 CDKN2A-AS1Q9UH64 79 aa0.44□□□□□ -2.34
SRGAP1-204ENST00000542381 PLECQ15149 4684 aaKnown RBP0.44□□□□□ -2.34
SRGAP1-204ENST00000542381 APOBP04114 4563 aaKnown RBP0.43□□□□□ -2.34
SRGAP1-204ENST00000542381 H0YAA0 97 aa0.43□□□□□ -2.34
SRGAP1-204ENST00000542381 DEFB114Q30KQ6 69 aa0.43□□□□□ -2.34
SRGAP1-204ENST00000542381 WFDC13Q8IUB5 93 aa0.43□□□□□ -2.34
SRGAP1-204ENST00000542381 VPS13BQ7Z7G8 4022 aa0.42□□□□□ -2.34
SRGAP1-204ENST00000542381 DNAH3Q8TD57 4116 aa0.42□□□□□ -2.34
SRGAP1-204ENST00000542381 CRIP1P50238 77 aa0.42□□□□□ -2.34
SRGAP1-204ENST00000542381 LPAP08519 4548 aa0.42□□□□□ -2.34
SRGAP1-204ENST00000542381 MUC12Q9UKN1 5478 aa0.42□□□□□ -2.34
SRGAP1-204ENST00000542381 ETDCA0A1B0GVM5 59 aa0.41□□□□□ -2.34
SRGAP1-204ENST00000542381 DNAH2Q9P225 4427 aa0.41□□□□□ -2.34
SRGAP1-204ENST00000542381 DNAH6Q9C0G6 4158 aa0.41□□□□□ -2.34
SRGAP1-204ENST00000542381 DNAH5Q8TE73 4624 aa0.41□□□□□ -2.34
SRGAP1-204ENST00000542381 PKHD1L1Q86WI1 4243 aa0.4□□□□□ -2.34
SRGAP1-204ENST00000542381 DNAH11Q96DT5 4516 aa0.4□□□□□ -2.34
SRGAP1-204ENST00000542381 LYNX1G3V0Z9 82 aa0.4□□□□□ -2.35
SRGAP1-204ENST00000542381 MRPL33O75394 65 aaKnown RBP0.4□□□□□ -2.35
SRGAP1-204ENST00000542381 LINC00158P58513 81 aa0.4□□□□□ -2.35
SRGAP1-204ENST00000542381 CD52P31358 61 aa0.39□□□□□ -2.35
SRGAP1-204ENST00000542381 Q9Y3F1 56 aa0.39□□□□□ -2.35
SRGAP1-204ENST00000542381 VPS13DQ5THJ4 4388 aa0.38□□□□□ -2.35
SRGAP1-204ENST00000542381 DNAH17Q9UFH2 4485 aa0.38□□□□□ -2.35
SRGAP1-204ENST00000542381 USH2AO75445 5202 aa0.38□□□□□ -2.35
SRGAP1-204ENST00000542381 GPR98Q8WXG9 6306 aa0.38□□□□□ -2.35
SRGAP1-204ENST00000542381 STATHP02808 62 aa0.38□□□□□ -2.35
SRGAP1-204ENST00000542381 SMR3BP02814 79 aaPredicted RBP0.38□□□□□ -2.35
SRGAP1-204ENST00000542381 K7EMI3 77 aa0.37□□□□□ -2.35
SRGAP1-204ENST00000542381 TFF3Q07654 80 aa0.37□□□□□ -2.35
SRGAP1-204ENST00000542381 KRTAP19-6Q3LI70 58 aa0.36□□□□□ -2.35
SRGAP1-204ENST00000542381 IGIPA6NJ69 53 aa0.35□□□□□ -2.35
SRGAP1-204ENST00000542381 M0R1W7 72 aa0.35□□□□□ -2.35
SRGAP1-204ENST00000542381 PRM1P04553 51 aa0.34□□□□□ -2.36
SRGAP1-204ENST00000542381 MT1HL1P0DM35 61 aa0.34□□□□□ -2.36
SRGAP1-204ENST00000542381 DEFB130BP0DP73 79 aa0.34□□□□□ -2.36
SRGAP1-204ENST00000542381 DEFB130AP0DP74 79 aa0.34□□□□□ -2.36
SRGAP1-204ENST00000542381 SPRR2EP22531 72 aa0.34□□□□□ -2.36
SRGAP1-204ENST00000542381 FCER1GP30273 86 aa0.34□□□□□ -2.36
SRGAP1-204ENST00000542381 SPRR2BP35325 72 aa0.34□□□□□ -2.36
SRGAP1-204ENST00000542381 SPRR2AP35326 72 aa0.34□□□□□ -2.36
SRGAP1-204ENST00000542381 DEFB133Q30KQ1 61 aa0.34□□□□□ -2.36
SRGAP1-204ENST00000542381 MACF1Q9UPN3 7388 aaKnown RBP0.33□□□□□ -2.36
SRGAP1-204ENST00000542381 IAPPP10997 89 aa0.33□□□□□ -2.36
SRGAP1-204ENST00000542381 MT4P47944 62 aa0.33□□□□□ -2.36
SRGAP1-204ENST00000542381 DNAH8Q96JB1 4490 aa0.32□□□□□ -2.36
SRGAP1-204ENST00000542381 SPRR2DP22532 72 aa0.32□□□□□ -2.36
SRGAP1-204ENST00000542381 NCBP2-AS2Q69YL0 99 aa0.32□□□□□ -2.36
SRGAP1-204ENST00000542381 NMES1Q9C002 83 aa0.32□□□□□ -2.36
SRGAP1-204ENST00000542381 MUC17Q685J3 4493 aa0.32□□□□□ -2.36
SRGAP1-204ENST00000542381 NEBP20929 6669 aa0.32□□□□□ -2.36
SRGAP1-204ENST00000542381 SERF2P84101 59 aa0.31□□□□□ -2.36
SRGAP1-204ENST00000542381 DEFB108AA8MXU0 73 aa0.3□□□□□ -2.36
SRGAP1-204ENST00000542381 MT1HP80294 61 aa0.3□□□□□ -2.36
SRGAP1-204ENST00000542381 MINOS1Q5TGZ0 78 aa0.3□□□□□ -2.36
SRGAP1-204ENST00000542381 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
SRGAP1-204ENST00000542381 M0R2T5 61 aa0.29□□□□□ -2.36
SRGAP1-204ENST00000542381 RPS27P42677 84 aaKnown RBP0.29□□□□□ -2.36
SRGAP1-204ENST00000542381 RPS27LQ71UM5 84 aaKnown RBP0.29□□□□□ -2.36
SRGAP1-204ENST00000542381 DEFB104AQ8WTQ1 72 aa0.29□□□□□ -2.36
SRGAP1-204ENST00000542381 DSTQ03001 7570 aaKnown RBP0.29□□□□□ -2.36
SRGAP1-204ENST00000542381 FLGP20930 4061 aaPredicted RBP0.29□□□□□ -2.36
SRGAP1-204ENST00000542381 DEFB135Q30KP9 77 aa0.28□□□□□ -2.36
SRGAP1-204ENST00000542381 KRTAP19-2Q3LHN2 52 aa0.28□□□□□ -2.36
SRGAP1-204ENST00000542381 SPRR2FQ96RM1 72 aa0.28□□□□□ -2.36
SRGAP1-204ENST00000542381 C6orf48Q9UBA6 75 aa0.28□□□□□ -2.36
SRGAP1-204ENST00000542381 SNRPGP15A8MWD9 76 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms