RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-226ENST00000541968 SPRR2AP35326 72 aa0.61□□□□□ -2.31
RAP1B-226ENST00000541968 KRTAP8-1Q8IUC2 63 aa0.61□□□□□ -2.31
RAP1B-226ENST00000541968 HSPG2P98160 4391 aa0.61□□□□□ -2.31
RAP1B-226ENST00000541968 MAP1AP78559 2803 aaPredicted RBP0.6□□□□□ -2.31
RAP1B-226ENST00000541968 MYO18BQ8IUG5 2567 aa0.6□□□□□ -2.31
RAP1B-226ENST00000541968 SPTBN5Q9NRC6 3674 aaKnown RBP0.6□□□□□ -2.31
RAP1B-226ENST00000541968 TLN2Q9Y4G6 2542 aa0.6□□□□□ -2.31
RAP1B-226ENST00000541968 DNAH7Q8WXX0 4024 aa0.6□□□□□ -2.31
RAP1B-226ENST00000541968 COL6A3P12111 3177 aa0.59□□□□□ -2.31
RAP1B-226ENST00000541968 MAST4O15021 2626 aa0.59□□□□□ -2.31
RAP1B-226ENST00000541968 FASNP49327 2511 aaKnown RBP0.59□□□□□ -2.31
RAP1B-226ENST00000541968 TEP1Q99973 2627 aaKnown RBP0.59□□□□□ -2.32
RAP1B-226ENST00000541968 ITPR1Q14643 2758 aa0.58□□□□□ -2.32
RAP1B-226ENST00000541968 MXRA5Q9NR99 2828 aa0.58□□□□□ -2.32
RAP1B-226ENST00000541968 TMEM167AQ8TBQ9 72 aa0.58□□□□□ -2.32
RAP1B-226ENST00000541968 USP9XQ93008 2570 aaPredicted RBP0.57□□□□□ -2.32
RAP1B-226ENST00000541968 CFAP54Q96N23 3096 aa0.57□□□□□ -2.32
RAP1B-226ENST00000541968 LAMA5O15230 3695 aa0.57□□□□□ -2.32
RAP1B-226ENST00000541968 DNAH6Q9C0G6 4158 aa0.56□□□□□ -2.32
RAP1B-226ENST00000541968 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
RAP1B-226ENST00000541968 WDR87Q6ZQQ6 2873 aa0.55□□□□□ -2.32
RAP1B-226ENST00000541968 DMXL2Q8TDJ6 3036 aa0.55□□□□□ -2.32
RAP1B-226ENST00000541968 DNAH8Q96JB1 4490 aa0.55□□□□□ -2.32
RAP1B-226ENST00000541968 TRIOO75962 3097 aa0.55□□□□□ -2.32
RAP1B-226ENST00000541968 DNAH9Q9NYC9 4486 aa0.55□□□□□ -2.32
RAP1B-226ENST00000541968 SVEP1Q4LDE5 3571 aa0.53□□□□□ -2.32
RAP1B-226ENST00000541968 ADGRG4Q8IZF6 3080 aa0.53□□□□□ -2.33
RAP1B-226ENST00000541968 PKHD1P08F94 4074 aa0.52□□□□□ -2.33
RAP1B-226ENST00000541968 SPRR2EP22531 72 aa0.52□□□□□ -2.33
RAP1B-226ENST00000541968 RHPN1-AS1Q9BWJ2 59 aa0.52□□□□□ -2.33
RAP1B-226ENST00000541968 HMCN2Q8NDA2 5059 aa0.52□□□□□ -2.33
RAP1B-226ENST00000541968 FAT4Q6V0I7 4981 aa0.51□□□□□ -2.33
RAP1B-226ENST00000541968 LRBAP50851 2863 aa0.5□□□□□ -2.33
RAP1B-226ENST00000541968 MGAM2Q2M2H8 2515 aa0.5□□□□□ -2.33
RAP1B-226ENST00000541968 RELNP78509 3460 aa0.5□□□□□ -2.33
RAP1B-226ENST00000541968 LAMA1P25391 3075 aa0.49□□□□□ -2.33
RAP1B-226ENST00000541968 APOBP04114 4563 aaKnown RBP0.49□□□□□ -2.33
RAP1B-226ENST00000541968 H3BUX3 64 aa0.49□□□□□ -2.33
RAP1B-226ENST00000541968 SPRR2FQ96RM1 72 aa0.49□□□□□ -2.33
RAP1B-226ENST00000541968 LAMA3Q16787 3333 aa0.49□□□□□ -2.33
RAP1B-226ENST00000541968 NBEAL1Q6ZS30 2694 aa0.49□□□□□ -2.33
RAP1B-226ENST00000541968 STAB2Q8WWQ8 2551 aa0.49□□□□□ -2.33
RAP1B-226ENST00000541968 FAT3Q8TDW7 4589 aa0.48□□□□□ -2.33
RAP1B-226ENST00000541968 LRP1BQ9NZR2 4599 aa0.48□□□□□ -2.33
RAP1B-226ENST00000541968 SMR3BP02814 79 aaPredicted RBP0.48□□□□□ -2.33
RAP1B-226ENST00000541968 CEP250Q9BV73 2442 aa0.48□□□□□ -2.33
RAP1B-226ENST00000541968 CSMD1Q96PZ7 3565 aa0.48□□□□□ -2.33
RAP1B-226ENST00000541968 ATMQ13315 3056 aa0.47□□□□□ -2.33
RAP1B-226ENST00000541968 DNAH1Q9P2D7 4330 aa0.47□□□□□ -2.33
RAP1B-226ENST00000541968 KRTAP19-5Q3LI72 72 aa0.47□□□□□ -2.33
RAP1B-226ENST00000541968 RPL39P5Q59GN2 51 aa0.46□□□□□ -2.34
RAP1B-226ENST00000541968 TEX15Q9BXT5 2789 aa0.45□□□□□ -2.34
RAP1B-226ENST00000541968 PRUNE2Q8WUY3 3088 aa0.44□□□□□ -2.34
RAP1B-226ENST00000541968 SPTAN1Q13813 2472 aaKnown RBP0.42□□□□□ -2.34
RAP1B-226ENST00000541968 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
RAP1B-226ENST00000541968 FAT1Q14517 4588 aa0.42□□□□□ -2.34
RAP1B-226ENST00000541968 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
RAP1B-226ENST00000541968 FRYLO94915 3013 aa0.41□□□□□ -2.34
RAP1B-226ENST00000541968 SMG1Q96Q15 3661 aaKnown RBP0.41□□□□□ -2.34
RAP1B-226ENST00000541968 DNAH12Q6ZR08 3092 aa0.4□□□□□ -2.35
RAP1B-226ENST00000541968 DNAH10Q8IVF4 4471 aa0.4□□□□□ -2.35
RAP1B-226ENST00000541968 NIPBLQ6KC79 2804 aaeCLIP0.4□□□□□ -2.35
RAP1B-226ENST00000541968 DEFB108AA8MXU0 73 aa0.4□□□□□ -2.35
RAP1B-226ENST00000541968 DEFB1P60022 68 aa0.4□□□□□ -2.35
RAP1B-226ENST00000541968 DOPEY1Q5JWR5 2465 aa0.39□□□□□ -2.35
RAP1B-226ENST00000541968 AHNAKQ09666 5890 aaKnown RBP0.39□□□□□ -2.35
RAP1B-226ENST00000541968 A0A096LNI7 61 aa0.39□□□□□ -2.35
RAP1B-226ENST00000541968 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
RAP1B-226ENST00000541968 CMYA5Q8N3K9 4069 aa0.39□□□□□ -2.35
RAP1B-226ENST00000541968 C5orf42Q9H799 3197 aa0.39□□□□□ -2.35
RAP1B-226ENST00000541968 LRP2P98164 4655 aa0.38□□□□□ -2.35
RAP1B-226ENST00000541968 DEFB136Q30KP8 78 aa0.38□□□□□ -2.35
RAP1B-226ENST00000541968 DEFB124Q8NES8 71 aa0.37□□□□□ -2.35
RAP1B-226ENST00000541968 TRRAPQ9Y4A5 3859 aa0.35□□□□□ -2.35
RAP1B-226ENST00000541968 ITPR2Q14571 2701 aa0.33□□□□□ -2.36
RAP1B-226ENST00000541968 CFAP46Q8IYW2 2715 aa0.33□□□□□ -2.36
RAP1B-226ENST00000541968 SRCAPQ6ZRS2 3230 aa0.32□□□□□ -2.36
RAP1B-226ENST00000541968 PLECQ15149 4684 aaKnown RBP0.32□□□□□ -2.36
RAP1B-226ENST00000541968 HTN1P15515 57 aa0.3□□□□□ -2.36
RAP1B-226ENST00000541968 MT1HP80294 61 aa0.3□□□□□ -2.36
RAP1B-226ENST00000541968 MUC5ACP98088 5654 aa0.28□□□□□ -2.36
RAP1B-226ENST00000541968 DEFB133Q30KQ1 61 aa0.28□□□□□ -2.36
RAP1B-226ENST00000541968 MT1EP04732 61 aa0.27□□□□□ -2.37
RAP1B-226ENST00000541968 DMDP11532 3685 aa0.26□□□□□ -2.37
RAP1B-226ENST00000541968 HERC1Q15751 4861 aa0.26□□□□□ -2.37
RAP1B-226ENST00000541968 KMT2DO14686 5537 aa0.25□□□□□ -2.37
RAP1B-226ENST00000541968 APELAP0DMC3 54 aa0.25□□□□□ -2.37
RAP1B-226ENST00000541968 RPS29P62273 56 aaKnown RBP0.25□□□□□ -2.37
RAP1B-226ENST00000541968 CSMD2Q7Z408 3487 aa0.25□□□□□ -2.37
RAP1B-226ENST00000541968 TLN1Q9Y490 2541 aaKnown RBP0.25□□□□□ -2.37
RAP1B-226ENST00000541968 MUC3AQ02505 3323 aa0.25□□□□□ -2.37
RAP1B-226ENST00000541968 LAMA2P24043 3122 aaKnown RBP0.24□□□□□ -2.37
RAP1B-226ENST00000541968 VPS13CQ709C8 3753 aa0.24□□□□□ -2.37
RAP1B-226ENST00000541968 CEP295Q9C0D2 2601 aa0.24□□□□□ -2.37
RAP1B-226ENST00000541968 DNAH17Q9UFH2 4485 aa0.24□□□□□ -2.37
RAP1B-226ENST00000541968 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
RAP1B-226ENST00000541968 FREM2Q5SZK8 3169 aa0.23□□□□□ -2.37
RAP1B-226ENST00000541968 MYO9AB2RTY4 2548 aa0.23□□□□□ -2.37
RAP1B-226ENST00000541968 DYNC1H1Q14204 4646 aaKnown RBP0.23□□□□□ -2.37
RAP1B-226ENST00000541968 MKI67P46013 3256 aaKnown RBP0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms