RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
POLR1B-217ENST00000541869 DNAH10Q8IVF4 4471 aa4.57□□□□□ -1.68
POLR1B-217ENST00000541869 PLECQ15149 4684 aaKnown RBP4.56□□□□□ -1.68
POLR1B-217ENST00000541869 KRTAP3-3Q9BYR6 98 aa4.53□□□□□ -1.68
POLR1B-217ENST00000541869 ZNF469Q96JG9 3925 aaPredicted RBP4.48□□□□□ -1.69
POLR1B-217ENST00000541869 MT1HP80294 61 aa4.47□□□□□ -1.69
POLR1B-217ENST00000541869 KRTAP3-2Q9BYR7 98 aa4.46□□□□□ -1.7
POLR1B-217ENST00000541869 DYNC1H1Q14204 4646 aaKnown RBP4.45□□□□□ -1.7
POLR1B-217ENST00000541869 VPS13CQ709C8 3753 aa4.45□□□□□ -1.7
POLR1B-217ENST00000541869 VPS13DQ5THJ4 4388 aa4.45□□□□□ -1.7
POLR1B-217ENST00000541869 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
POLR1B-217ENST00000541869 RYR1P21817 5038 aa4.41□□□□□ -1.7
POLR1B-217ENST00000541869 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
POLR1B-217ENST00000541869 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
POLR1B-217ENST00000541869 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
POLR1B-217ENST00000541869 DNAH17Q9UFH2 4485 aa4.36□□□□□ -1.71
POLR1B-217ENST00000541869 MT2AP02795 61 aa4.34□□□□□ -1.71
POLR1B-217ENST00000541869 ANK2Q01484 3957 aa4.34□□□□□ -1.71
POLR1B-217ENST00000541869 FAT2Q9NYQ8 4349 aa4.33□□□□□ -1.72
POLR1B-217ENST00000541869 DNAH2Q9P225 4427 aa4.33□□□□□ -1.72
POLR1B-217ENST00000541869 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
POLR1B-217ENST00000541869 PRKDCP78527 4128 aaKnown RBP4.32□□□□□ -1.72
POLR1B-217ENST00000541869 STARD9Q9P2P6 4700 aa4.31□□□□□ -1.72
POLR1B-217ENST00000541869 DYNC2H1Q8NCM8 4307 aaKnown RBP4.29□□□□□ -1.72
POLR1B-217ENST00000541869 FAT1Q14517 4588 aa4.28□□□□□ -1.72
POLR1B-217ENST00000541869 BIRC6Q9NR09 4857 aa4.27□□□□□ -1.73
POLR1B-217ENST00000541869 RYR3Q15413 4870 aa4.25□□□□□ -1.73
POLR1B-217ENST00000541869 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
POLR1B-217ENST00000541869 KRTAP10-7P60409 375 aaPredicted RBP4.25□□□□□ -1.73
POLR1B-217ENST00000541869 KIAA1109Q2LD37 5005 aa4.25□□□□□ -1.73
POLR1B-217ENST00000541869 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
POLR1B-217ENST00000541869 MT1FP04733 61 aa4.23□□□□□ -1.73
POLR1B-217ENST00000541869 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
POLR1B-217ENST00000541869 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
POLR1B-217ENST00000541869 SPRR2EP22531 72 aa4.19□□□□□ -1.74
POLR1B-217ENST00000541869 SPRR2BP35325 72 aa4.19□□□□□ -1.74
POLR1B-217ENST00000541869 SPRR2AP35326 72 aa4.19□□□□□ -1.74
POLR1B-217ENST00000541869 CSMD3Q7Z407 3707 aa4.19□□□□□ -1.74
POLR1B-217ENST00000541869 RYR2Q92736 4967 aa4.17□□□□□ -1.74
POLR1B-217ENST00000541869 DNAH3Q8TD57 4116 aa4.15□□□□□ -1.75
POLR1B-217ENST00000541869 DNAH6Q9C0G6 4158 aa4.14□□□□□ -1.75
POLR1B-217ENST00000541869 DNAH8Q96JB1 4490 aa4.12□□□□□ -1.75
POLR1B-217ENST00000541869 HERC2O95714 4834 aa4.1□□□□□ -1.75
POLR1B-217ENST00000541869 SPRR2DP22532 72 aa4.08□□□□□ -1.76
POLR1B-217ENST00000541869 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
POLR1B-217ENST00000541869 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
POLR1B-217ENST00000541869 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
POLR1B-217ENST00000541869 KMT2AQ03164 3969 aa4.04□□□□□ -1.76
POLR1B-217ENST00000541869 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
POLR1B-217ENST00000541869 HERC1Q15751 4861 aa4.03□□□□□ -1.76
POLR1B-217ENST00000541869 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
POLR1B-217ENST00000541869 INE1O15225 51 aa4.02□□□□□ -1.77
POLR1B-217ENST00000541869 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
POLR1B-217ENST00000541869 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
POLR1B-217ENST00000541869 LCE2BO14633 110 aa3.99□□□□□ -1.77
POLR1B-217ENST00000541869 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
POLR1B-217ENST00000541869 EPPK1P58107 5090 aaKnown RBP3.98□□□□□ -1.77
POLR1B-217ENST00000541869 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.77
POLR1B-217ENST00000541869 KRTAP19-1Q8IUB9 90 aa3.96□□□□□ -1.78
POLR1B-217ENST00000541869 CMYA5Q8N3K9 4069 aa3.95□□□□□ -1.78
POLR1B-217ENST00000541869 DNAH7Q8WXX0 4024 aa3.94□□□□□ -1.78
POLR1B-217ENST00000541869 LYSTQ99698 3801 aa3.94□□□□□ -1.78
POLR1B-217ENST00000541869 KRTAP9-8Q9BYQ0 159 aa3.93□□□□□ -1.78
POLR1B-217ENST00000541869 LCE2CQ5TA81 110 aa3.91□□□□□ -1.78
POLR1B-217ENST00000541869 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
POLR1B-217ENST00000541869 HSPG2P98160 4391 aa3.9□□□□□ -1.78
POLR1B-217ENST00000541869 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.78
POLR1B-217ENST00000541869 PKHD1L1Q86WI1 4243 aa3.9□□□□□ -1.79
POLR1B-217ENST00000541869 LRP1Q07954 4544 aaKnown RBP3.89□□□□□ -1.79
POLR1B-217ENST00000541869 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
POLR1B-217ENST00000541869 PKD1P98161 4303 aa3.85□□□□□ -1.79
POLR1B-217ENST00000541869 MYCBP2O75592 4640 aa3.85□□□□□ -1.79
POLR1B-217ENST00000541869 MT1BP07438 61 aa3.83□□□□□ -1.8
POLR1B-217ENST00000541869 HYDINQ4G0P3 5121 aa3.82□□□□□ -1.8
POLR1B-217ENST00000541869 LCE2DQ5TA82 110 aaPredicted RBP3.81□□□□□ -1.8
POLR1B-217ENST00000541869 MT1XP80297 61 aa3.78□□□□□ -1.8
POLR1B-217ENST00000541869 MT1GP13640 62 aa3.76□□□□□ -1.81
POLR1B-217ENST00000541869 FRAS1Q86XX4 4008 aa3.76□□□□□ -1.81
POLR1B-217ENST00000541869 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
POLR1B-217ENST00000541869 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
POLR1B-217ENST00000541869 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
POLR1B-217ENST00000541869 ABCA13Q86UQ4 5058 aa3.72□□□□□ -1.81
POLR1B-217ENST00000541869 HECTD4Q9Y4D8 3996 aa3.72□□□□□ -1.81
POLR1B-217ENST00000541869 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
POLR1B-217ENST00000541869 LRP2P98164 4655 aa3.7□□□□□ -1.82
POLR1B-217ENST00000541869 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
POLR1B-217ENST00000541869 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
POLR1B-217ENST00000541869 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
POLR1B-217ENST00000541869 PKHD1P08F94 4074 aa3.66□□□□□ -1.82
POLR1B-217ENST00000541869 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
POLR1B-217ENST00000541869 KRTAP4-8A0A0G2JLE6 195 aa3.62□□□□□ -1.83
POLR1B-217ENST00000541869 KRTAP4-8Q9BYQ9 185 aa3.62□□□□□ -1.83
POLR1B-217ENST00000541869 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
POLR1B-217ENST00000541869 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
POLR1B-217ENST00000541869 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.84
POLR1B-217ENST00000541869 MT4P47944 62 aa3.55□□□□□ -1.84
POLR1B-217ENST00000541869 LPAP08519 4548 aa3.55□□□□□ -1.84
POLR1B-217ENST00000541869 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
POLR1B-217ENST00000541869 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
POLR1B-217ENST00000541869 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms