RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 DEFB110Q30KQ9 67 aa-0.57□□□□□ -2.5
C12orf56-204ENST00000541802 MINOS1Q5TGZ0 78 aa-0.57□□□□□ -2.5
C12orf56-204ENST00000541802 RPS27LQ71UM5 84 aaKnown RBP-0.57□□□□□ -2.5
C12orf56-204ENST00000541802 USP34Q70CQ2 3546 aa-0.58□□□□□ -2.5
C12orf56-204ENST00000541802 DNAH12Q6ZR08 3092 aa-0.58□□□□□ -2.5
C12orf56-204ENST00000541802 RANBP2P49792 3224 aaKnown RBP-0.59□□□□□ -2.5
C12orf56-204ENST00000541802 SMCO4Q9NRQ5 59 aa-0.59□□□□□ -2.5
C12orf56-204ENST00000541802 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.59□□□□□ -2.5
C12orf56-204ENST00000541802 INO80Q9ULG1 1556 aaPredicted RBP-0.59□□□□□ -2.5
C12orf56-204ENST00000541802 NRAPQ86VF7 1730 aa-0.59□□□□□ -2.5
C12orf56-204ENST00000541802 DMDP11532 3685 aa-0.59□□□□□ -2.5
C12orf56-204ENST00000541802 ANKRD36CQ5JPF3 1778 aa-0.6□□□□□ -2.5
C12orf56-204ENST00000541802 CENPFP49454 3210 aa-0.6□□□□□ -2.5
C12orf56-204ENST00000541802 PRUNE2Q8WUY3 3088 aa-0.6□□□□□ -2.51
C12orf56-204ENST00000541802 CDC42BPGQ6DT37 1551 aa-0.6□□□□□ -2.51
C12orf56-204ENST00000541802 DEFB114Q30KQ6 69 aa-0.6□□□□□ -2.51
C12orf56-204ENST00000541802 GNG13Q9P2W3 67 aa-0.6□□□□□ -2.51
C12orf56-204ENST00000541802 SMG1Q96Q15 3661 aaKnown RBP-0.6□□□□□ -2.51
C12orf56-204ENST00000541802 ATMQ13315 3056 aa-0.6□□□□□ -2.51
C12orf56-204ENST00000541802 VPS13AQ96RL7 3174 aa-0.6□□□□□ -2.51
C12orf56-204ENST00000541802 MYO5CQ9NQX4 1742 aa-0.61□□□□□ -2.51
C12orf56-204ENST00000541802 ITSN2Q9NZM3 1697 aa-0.61□□□□□ -2.51
C12orf56-204ENST00000541802 PDCD5O14737 125 aa-0.61□□□□□ -2.51
C12orf56-204ENST00000541802 LRRIQ1Q96JM4 1722 aa-0.61□□□□□ -2.51
C12orf56-204ENST00000541802 PARP4Q9UKK3 1724 aaKnown RBP-0.61□□□□□ -2.51
C12orf56-204ENST00000541802 DUOX2Q9NRD8 1548 aa-0.62□□□□□ -2.51
C12orf56-204ENST00000541802 UGGT2Q9NYU1 1516 aa-0.62□□□□□ -2.51
C12orf56-204ENST00000541802 C6orf48Q9UBA6 75 aa-0.62□□□□□ -2.51
C12orf56-204ENST00000541802 XIRP2A4UGR9 3374 aa-0.62□□□□□ -2.51
C12orf56-204ENST00000541802 NHSQ6T4R5 1651 aa-0.62□□□□□ -2.51
C12orf56-204ENST00000541802 ABCC6O95255 1503 aa-0.63□□□□□ -2.51
C12orf56-204ENST00000541802 IQGAP3Q86VI3 1631 aa-0.63□□□□□ -2.51
C12orf56-204ENST00000541802 FCER1GP30273 86 aa-0.63□□□□□ -2.51
C12orf56-204ENST00000541802 NCBP2-AS2Q69YL0 99 aa-0.63□□□□□ -2.51
C12orf56-204ENST00000541802 ASPMQ8IZT6 3477 aa-0.63□□□□□ -2.51
C12orf56-204ENST00000541802 TOGARAM1Q9Y4F4 1720 aa-0.64□□□□□ -2.51
C12orf56-204ENST00000541802 KIF1AQ12756 1690 aa-0.64□□□□□ -2.51
C12orf56-204ENST00000541802 IGLV5-48A0A075B6I7 105 aa-0.64□□□□□ -2.51
C12orf56-204ENST00000541802 SFTA3P0C7M3 94 aa-0.64□□□□□ -2.51
C12orf56-204ENST00000541802 DNAH14Q0VDD8 3507 aa-0.64□□□□□ -2.51
C12orf56-204ENST00000541802 DNAH17Q9UFH2 4485 aa-0.64□□□□□ -2.51
C12orf56-204ENST00000541802 DNMBPQ6XZF7 1577 aa-0.65□□□□□ -2.51
C12orf56-204ENST00000541802 H3BUA1 57 aa-0.65□□□□□ -2.51
C12orf56-204ENST00000541802 ASXL1Q8IXJ9 1541 aa-0.65□□□□□ -2.51
C12orf56-204ENST00000541802 SPTBN5Q9NRC6 3674 aaKnown RBP-0.66□□□□□ -2.51
C12orf56-204ENST00000541802 MT1BP07438 61 aa-0.66□□□□□ -2.52
C12orf56-204ENST00000541802 DNAH10Q8IVF4 4471 aa-0.66□□□□□ -2.52
C12orf56-204ENST00000541802 SCRIBQ14160 1630 aa-0.67□□□□□ -2.52
C12orf56-204ENST00000541802 ABCA9Q8IUA7 1624 aa-0.67□□□□□ -2.52
C12orf56-204ENST00000541802 MMP24-AS1A0A0U1RRL7 71 aa-0.67□□□□□ -2.52
C12orf56-204ENST00000541802 LINC01549A6NIU2 74 aa-0.67□□□□□ -2.52
C12orf56-204ENST00000541802 KRTAP19-5Q3LI72 72 aa-0.68□□□□□ -2.52
C12orf56-204ENST00000541802 C3P01024 1663 aa-0.69□□□□□ -2.52
C12orf56-204ENST00000541802 TNP1P09430 55 aa-0.69□□□□□ -2.52
C12orf56-204ENST00000541802 K7EMI3 77 aa-0.7□□□□□ -2.52
C12orf56-204ENST00000541802 MT1HP80294 61 aa-0.7□□□□□ -2.52
C12orf56-204ENST00000541802 NOP10Q9NPE3 64 aaKnown RBP-0.7□□□□□ -2.52
C12orf56-204ENST00000541802 GOLGB1Q14789 3259 aaKnown RBP-0.7□□□□□ -2.52
C12orf56-204ENST00000541802 DEFB1P60022 68 aa-0.71□□□□□ -2.52
C12orf56-204ENST00000541802 KRTAP8-1Q8IUC2 63 aa-0.71□□□□□ -2.52
C12orf56-204ENST00000541802 CLASP1Q7Z460 1538 aa-0.72□□□□□ -2.52
C12orf56-204ENST00000541802 MT1HL1P0DM35 61 aa-0.72□□□□□ -2.52
C12orf56-204ENST00000541802 MROH1Q8NDA8 1641 aa-0.73□□□□□ -2.53
C12orf56-204ENST00000541802 LY75O60449 1722 aa-0.73□□□□□ -2.53
C12orf56-204ENST00000541802 M0R1W7 72 aa-0.74□□□□□ -2.53
C12orf56-204ENST00000541802 CLPSL2Q6UWE3 100 aa-0.74□□□□□ -2.53
C12orf56-204ENST00000541802 SMR3BP02814 79 aaPredicted RBP-0.75□□□□□ -2.53
C12orf56-204ENST00000541802 MT1MQ8N339 61 aa-0.75□□□□□ -2.53
C12orf56-204ENST00000541802 MADDQ8WXG6 1647 aa-0.76□□□□□ -2.53
C12orf56-204ENST00000541802 TIAM1Q13009 1591 aa-0.78□□□□□ -2.53
C12orf56-204ENST00000541802 EFCAB5A4FU69 1503 aa-0.78□□□□□ -2.53
C12orf56-204ENST00000541802 NMES1Q9C002 83 aa-0.78□□□□□ -2.53
C12orf56-204ENST00000541802 GLI2P10070 1586 aa-0.79□□□□□ -2.54
C12orf56-204ENST00000541802 MT1FP04733 61 aa-0.79□□□□□ -2.54
C12orf56-204ENST00000541802 SERF2P84101 59 aa-0.79□□□□□ -2.54
C12orf56-204ENST00000541802 LINC00308Q8TCZ7 52 aa-0.79□□□□□ -2.54
C12orf56-204ENST00000541802 ABRACLQ9P1F3 81 aa-0.79□□□□□ -2.54
C12orf56-204ENST00000541802 CDC42BPAQ5VT25 1732 aa-0.79□□□□□ -2.54
C12orf56-204ENST00000541802 MAST1Q9Y2H9 1570 aa-0.79□□□□□ -2.54
C12orf56-204ENST00000541802 CROCC2H7BZ55 1655 aa-0.8□□□□□ -2.54
C12orf56-204ENST00000541802 A0A087WWC5 75 aa-0.8□□□□□ -2.54
C12orf56-204ENST00000541802 M0QY20 66 aa-0.8□□□□□ -2.54
C12orf56-204ENST00000541802 MT2AP02795 61 aa-0.8□□□□□ -2.54
C12orf56-204ENST00000541802 MT1GP13640 62 aa-0.8□□□□□ -2.54
C12orf56-204ENST00000541802 TMEM167BQ9NRX6 74 aa-0.8□□□□□ -2.54
C12orf56-204ENST00000541802 KAAG1Q9UBP8 84 aa-0.8□□□□□ -2.54
C12orf56-204ENST00000541802 EEA1Q15075 1411 aa-0.81□□□□□ -2.54
C12orf56-204ENST00000541802 IGIPA6NJ69 53 aa-0.81□□□□□ -2.54
C12orf56-204ENST00000541802 M0QZ58 72 aa-0.81□□□□□ -2.54
C12orf56-204ENST00000541802 ABCA6Q8N139 1617 aa-0.82□□□□□ -2.54
C12orf56-204ENST00000541802 MT1EP04732 61 aa-0.82□□□□□ -2.54
C12orf56-204ENST00000541802 SMIM27A0A1W2PRY6 76 aa-0.83□□□□□ -2.54
C12orf56-204ENST00000541802 MT1XP80297 61 aa-0.83□□□□□ -2.54
C12orf56-204ENST00000541802 KRTAP19-2Q3LHN2 52 aa-0.83□□□□□ -2.54
C12orf56-204ENST00000541802 A8MTW9 85 aa-0.84□□□□□ -2.54
C12orf56-204ENST00000541802 WFDC10BQ8IUB3 73 aa-0.87□□□□□ -2.55
C12orf56-204ENST00000541802 S100ZQ8WXG8 99 aa-0.87□□□□□ -2.55
C12orf56-204ENST00000541802 MT1LQ93083 61 aa-0.87□□□□□ -2.55
C12orf56-204ENST00000541802 ALS2Q96Q42 1657 aa-0.88□□□□□ -2.55
C12orf56-204ENST00000541802 A0A1B0GUL6 1792 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms