RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 WFDC13Q8IUB5 93 aa4.38□□□□□ -1.71
TRAPPC1-202ENST00000540486 C5orf47Q569G3 176 aa4.37□□□□□ -1.71
TRAPPC1-202ENST00000540486 Q5W150 140 aa4.37□□□□□ -1.71
TRAPPC1-202ENST00000540486 CASC2Q6XLA1 102 aa4.37□□□□□ -1.71
TRAPPC1-202ENST00000540486 J3QR89 54 aa4.36□□□□□ -1.71
TRAPPC1-202ENST00000540486 NDUFS5O43920 106 aa4.36□□□□□ -1.71
TRAPPC1-202ENST00000540486 HCG22E2RYF7 251 aa4.34□□□□□ -1.71
TRAPPC1-202ENST00000540486 CXCL6P80162 114 aa4.34□□□□□ -1.71
TRAPPC1-202ENST00000540486 KMT2DO14686 5537 aa4.34□□□□□ -1.72
TRAPPC1-202ENST00000540486 ACYP1P07311 99 aa4.33□□□□□ -1.72
TRAPPC1-202ENST00000540486 RBM12B-AS1Q9P1G2 102 aa4.33□□□□□ -1.72
TRAPPC1-202ENST00000540486 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
TRAPPC1-202ENST00000540486 FAM236DA0A1B0GTK5 79 aa4.31□□□□□ -1.72
TRAPPC1-202ENST00000540486 FAM240AA0A1B0GVK7 77 aa4.31□□□□□ -1.72
TRAPPC1-202ENST00000540486 FAM236CP0DP71 79 aa4.31□□□□□ -1.72
TRAPPC1-202ENST00000540486 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
TRAPPC1-202ENST00000540486 SMIM20Q8N5G0 67 aa4.29□□□□□ -1.72
TRAPPC1-202ENST00000540486 ANAPC13Q9BS18 74 aa4.26□□□□□ -1.73
TRAPPC1-202ENST00000540486 C7orf65Q6ZTY9 151 aa4.25□□□□□ -1.73
TRAPPC1-202ENST00000540486 TP53AIP1Q9HCN2 124 aa4.25□□□□□ -1.73
TRAPPC1-202ENST00000540486 ATP5EP2Q5VTU8 51 aa4.24□□□□□ -1.73
TRAPPC1-202ENST00000540486 LINC00643Q86TS7 51 aa4.24□□□□□ -1.73
TRAPPC1-202ENST00000540486 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
TRAPPC1-202ENST00000540486 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
TRAPPC1-202ENST00000540486 HIST1H4AP62805 103 aaKnown RBP4.23□□□□□ -1.73
TRAPPC1-202ENST00000540486 A0A087WVE0 104 aa4.22□□□□□ -1.73
TRAPPC1-202ENST00000540486 C4orf26Q17RF5 130 aa4.21□□□□□ -1.74
TRAPPC1-202ENST00000540486 H1FX-AS1Q4G0G2 97 aa4.21□□□□□ -1.74
TRAPPC1-202ENST00000540486 A6NN06 94 aa4.18□□□□□ -1.74
TRAPPC1-202ENST00000540486 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
TRAPPC1-202ENST00000540486 TRAV22A0A0B4J277 110 aa4.16□□□□□ -1.74
TRAPPC1-202ENST00000540486 UQCRQO14949 82 aa4.16□□□□□ -1.74
TRAPPC1-202ENST00000540486 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.75
TRAPPC1-202ENST00000540486 C1orf64Q8NEQ6 169 aa4.14□□□□□ -1.75
TRAPPC1-202ENST00000540486 MT-ATP8P03928 68 aa4.13□□□□□ -1.75
TRAPPC1-202ENST00000540486 SEC61GP60059 68 aa4.13□□□□□ -1.75
TRAPPC1-202ENST00000540486 RPS28P62857 69 aaKnown RBP4.13□□□□□ -1.75
TRAPPC1-202ENST00000540486 OCR1Q9BZK8 76 aa4.13□□□□□ -1.75
TRAPPC1-202ENST00000540486 LOC101927531A0A1B0GV80 90 aa4.12□□□□□ -1.75
TRAPPC1-202ENST00000540486 H0Y9P7 68 aa4.12□□□□□ -1.75
TRAPPC1-202ENST00000540486 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
TRAPPC1-202ENST00000540486 MT3P25713 68 aa4.12□□□□□ -1.75
TRAPPC1-202ENST00000540486 ATOX1O00244 68 aa4.09□□□□□ -1.75
TRAPPC1-202ENST00000540486 SPRR2EP22531 72 aa4.09□□□□□ -1.75
TRAPPC1-202ENST00000540486 SPRR2BP35325 72 aa4.09□□□□□ -1.75
TRAPPC1-202ENST00000540486 SPRR2AP35326 72 aa4.09□□□□□ -1.75
TRAPPC1-202ENST00000540486 V9GYY9 64 aa4.09□□□□□ -1.75
TRAPPC1-202ENST00000540486 KLKP1Q107X0 134 aa4.08□□□□□ -1.76
TRAPPC1-202ENST00000540486 LCA10Q71F78 164 aa4.08□□□□□ -1.76
TRAPPC1-202ENST00000540486 LINC00208Q96KT6 92 aa4.08□□□□□ -1.76
TRAPPC1-202ENST00000540486 IMUPQ9GZP8 106 aa4.07□□□□□ -1.76
TRAPPC1-202ENST00000540486 S4R3F8 94 aa4.07□□□□□ -1.76
TRAPPC1-202ENST00000540486 PRO0628Q9UI54 55 aa4.06□□□□□ -1.76
TRAPPC1-202ENST00000540486 MP68P56378 58 aa4.04□□□□□ -1.76
TRAPPC1-202ENST00000540486 CSAG1Q6PB30 78 aa4.04□□□□□ -1.76
TRAPPC1-202ENST00000540486 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
TRAPPC1-202ENST00000540486 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
TRAPPC1-202ENST00000540486 H3BPC8 53 aa4.01□□□□□ -1.77
TRAPPC1-202ENST00000540486 TMEM258P61165 79 aa4.01□□□□□ -1.77
TRAPPC1-202ENST00000540486 FAM236AA0A1B0GUQ0 79 aa3.99□□□□□ -1.77
TRAPPC1-202ENST00000540486 FAM236BA0A1B0GV22 79 aa3.99□□□□□ -1.77
TRAPPC1-202ENST00000540486 MT1BP07438 61 aa3.98□□□□□ -1.77
TRAPPC1-202ENST00000540486 TRAV7A0A075B6U4 112 aa3.97□□□□□ -1.77
TRAPPC1-202ENST00000540486 A8MUN3 132 aa3.97□□□□□ -1.77
TRAPPC1-202ENST00000540486 SPRR2DP22532 72 aa3.97□□□□□ -1.77
TRAPPC1-202ENST00000540486 Q5VV11 94 aa3.97□□□□□ -1.77
TRAPPC1-202ENST00000540486 COX7CP15954 63 aa3.96□□□□□ -1.78
TRAPPC1-202ENST00000540486 NDUFC1O43677 76 aa3.94□□□□□ -1.78
TRAPPC1-202ENST00000540486 DMAC1Q96GE9 116 aa3.92□□□□□ -1.78
TRAPPC1-202ENST00000540486 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
TRAPPC1-202ENST00000540486 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
TRAPPC1-202ENST00000540486 H0YAA0 97 aa3.9□□□□□ -1.79
TRAPPC1-202ENST00000540486 SERP1Q9Y6X1 66 aa3.9□□□□□ -1.79
TRAPPC1-202ENST00000540486 SNURFQ9Y675 71 aa3.89□□□□□ -1.79
TRAPPC1-202ENST00000540486 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
TRAPPC1-202ENST00000540486 SERP2Q8N6R1 65 aa3.88□□□□□ -1.79
TRAPPC1-202ENST00000540486 ADM2Q7Z4H4 148 aa3.87□□□□□ -1.79
TRAPPC1-202ENST00000540486 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC1-202ENST00000540486 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
TRAPPC1-202ENST00000540486 ACYP2P14621 99 aa3.85□□□□□ -1.79
TRAPPC1-202ENST00000540486 C20orf197Q8N268 126 aa3.85□□□□□ -1.79
TRAPPC1-202ENST00000540486 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
TRAPPC1-202ENST00000540486 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC1-202ENST00000540486 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
TRAPPC1-202ENST00000540486 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
TRAPPC1-202ENST00000540486 P0C880 135 aa3.82□□□□□ -1.8
TRAPPC1-202ENST00000540486 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
TRAPPC1-202ENST00000540486 SPANXA2-OT1Q8N9U9 137 aa3.81□□□□□ -1.8
TRAPPC1-202ENST00000540486 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
TRAPPC1-202ENST00000540486 CYSTM1Q9H1C7 97 aa3.77□□□□□ -1.81
TRAPPC1-202ENST00000540486 CHKB-CPT1BH3BT56 60 aa3.74□□□□□ -1.81
TRAPPC1-202ENST00000540486 H7BZZ5 65 aa3.73□□□□□ -1.81
TRAPPC1-202ENST00000540486 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
TRAPPC1-202ENST00000540486 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
TRAPPC1-202ENST00000540486 R4GN34 69 aa3.73□□□□□ -1.81
TRAPPC1-202ENST00000540486 M0QZ58 72 aa3.71□□□□□ -1.82
TRAPPC1-202ENST00000540486 COA5Q86WW8 74 aa3.7□□□□□ -1.82
TRAPPC1-202ENST00000540486 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
TRAPPC1-202ENST00000540486 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
TRAPPC1-202ENST00000540486 PRO2289Q9P1D8 64 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms