RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-222ENST00000539680 SVEP1Q4LDE5 3571 aa3.6□□□□□ -1.83
ECHDC2-222ENST00000539680 PKD1L1Q8TDX9 2849 aa3.6□□□□□ -1.83
ECHDC2-222ENST00000539680 KRTAP9-2Q9BYQ4 174 aa3.6□□□□□ -1.83
ECHDC2-222ENST00000539680 MT1HP80294 61 aa3.58□□□□□ -1.84
ECHDC2-222ENST00000539680 CELSR1Q9NYQ6 3014 aa3.57□□□□□ -1.84
ECHDC2-222ENST00000539680 VWFP04275 2813 aa3.56□□□□□ -1.84
ECHDC2-222ENST00000539680 SPRR2GQ9BYE4 73 aa3.56□□□□□ -1.84
ECHDC2-222ENST00000539680 DNAH1Q9P2D7 4330 aa3.54□□□□□ -1.84
ECHDC2-222ENST00000539680 CUBNO60494 3623 aa3.53□□□□□ -1.84
ECHDC2-222ENST00000539680 LCE2DQ5TA82 110 aaPredicted RBP3.52□□□□□ -1.85
ECHDC2-222ENST00000539680 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
ECHDC2-222ENST00000539680 MT2AP02795 61 aa3.5□□□□□ -1.85
ECHDC2-222ENST00000539680 DNAH9Q9NYC9 4486 aa3.48□□□□□ -1.85
ECHDC2-222ENST00000539680 DNAH10Q8IVF4 4471 aa3.48□□□□□ -1.85
ECHDC2-222ENST00000539680 CMYA5Q8N3K9 4069 aa3.47□□□□□ -1.85
ECHDC2-222ENST00000539680 KRTAP4-1Q9BYQ7 146 aa3.47□□□□□ -1.85
ECHDC2-222ENST00000539680 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
ECHDC2-222ENST00000539680 ZNF469Q96JG9 3925 aaPredicted RBP3.46□□□□□ -1.86
ECHDC2-222ENST00000539680 CSMD2Q7Z408 3487 aa3.46□□□□□ -1.86
ECHDC2-222ENST00000539680 FAT3Q8TDW7 4589 aa3.44□□□□□ -1.86
ECHDC2-222ENST00000539680 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
ECHDC2-222ENST00000539680 ANK2Q01484 3957 aa3.44□□□□□ -1.86
ECHDC2-222ENST00000539680 LRP1BQ9NZR2 4599 aa3.42□□□□□ -1.86
ECHDC2-222ENST00000539680 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
ECHDC2-222ENST00000539680 TRRAPQ9Y4A5 3859 aa3.41□□□□□ -1.86
ECHDC2-222ENST00000539680 DNAH11Q96DT5 4516 aa3.4□□□□□ -1.86
ECHDC2-222ENST00000539680 DYNC2H1Q8NCM8 4307 aaKnown RBP3.4□□□□□ -1.87
ECHDC2-222ENST00000539680 DYNC1H1Q14204 4646 aaKnown RBP3.4□□□□□ -1.87
ECHDC2-222ENST00000539680 DNAH3Q8TD57 4116 aa3.4□□□□□ -1.87
ECHDC2-222ENST00000539680 MT1FP04733 61 aa3.39□□□□□ -1.87
ECHDC2-222ENST00000539680 DNHD1Q96M86 4753 aa3.38□□□□□ -1.87
ECHDC2-222ENST00000539680 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
ECHDC2-222ENST00000539680 MEGF8Q7Z7M0 2845 aa3.36□□□□□ -1.87
ECHDC2-222ENST00000539680 DNAH17Q9UFH2 4485 aa3.36□□□□□ -1.87
ECHDC2-222ENST00000539680 DNAH6Q9C0G6 4158 aa3.35□□□□□ -1.87
ECHDC2-222ENST00000539680 PCLOQ9Y6V0 5065 aa3.33□□□□□ -1.88
ECHDC2-222ENST00000539680 RYR3Q15413 4870 aa3.32□□□□□ -1.88
ECHDC2-222ENST00000539680 DNAH5Q8TE73 4624 aa3.31□□□□□ -1.88
ECHDC2-222ENST00000539680 VPS13DQ5THJ4 4388 aa3.3□□□□□ -1.88
ECHDC2-222ENST00000539680 SRRM2Q9UQ35 2752 aaKnown RBP3.29□□□□□ -1.88
ECHDC2-222ENST00000539680 HERC2O95714 4834 aa3.29□□□□□ -1.88
ECHDC2-222ENST00000539680 SPRR2EP22531 72 aa3.29□□□□□ -1.88
ECHDC2-222ENST00000539680 SPRR2BP35325 72 aa3.29□□□□□ -1.88
ECHDC2-222ENST00000539680 SPRR2AP35326 72 aa3.29□□□□□ -1.88
ECHDC2-222ENST00000539680 KRTAP19-8Q3LI54 63 aa3.29□□□□□ -1.88
ECHDC2-222ENST00000539680 HERC1Q15751 4861 aa3.28□□□□□ -1.88
ECHDC2-222ENST00000539680 LCE2CQ5TA81 110 aa3.27□□□□□ -1.89
ECHDC2-222ENST00000539680 RYR2Q92736 4967 aa3.27□□□□□ -1.89
ECHDC2-222ENST00000539680 PLECQ15149 4684 aaKnown RBP3.26□□□□□ -1.89
ECHDC2-222ENST00000539680 FAT2Q9NYQ8 4349 aa3.26□□□□□ -1.89
ECHDC2-222ENST00000539680 SACSQ9NZJ4 4579 aa3.26□□□□□ -1.89
ECHDC2-222ENST00000539680 DNAH8Q96JB1 4490 aa3.26□□□□□ -1.89
ECHDC2-222ENST00000539680 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
ECHDC2-222ENST00000539680 COL7A1Q02388 2944 aa3.25□□□□□ -1.89
ECHDC2-222ENST00000539680 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
ECHDC2-222ENST00000539680 CSMD3Q7Z407 3707 aa3.24□□□□□ -1.89
ECHDC2-222ENST00000539680 HSPG2P98160 4391 aa3.22□□□□□ -1.89
ECHDC2-222ENST00000539680 DNAH7Q8WXX0 4024 aa3.22□□□□□ -1.89
ECHDC2-222ENST00000539680 PRKDCP78527 4128 aaKnown RBP3.21□□□□□ -1.9
ECHDC2-222ENST00000539680 MYCBP2O75592 4640 aa3.21□□□□□ -1.9
ECHDC2-222ENST00000539680 SPRR2DP22532 72 aa3.2□□□□□ -1.9
ECHDC2-222ENST00000539680 LYSTQ99698 3801 aa3.18□□□□□ -1.9
ECHDC2-222ENST00000539680 LCE2BO14633 110 aa3.17□□□□□ -1.9
ECHDC2-222ENST00000539680 KRTAP12-4P60329 112 aa3.15□□□□□ -1.9
ECHDC2-222ENST00000539680 STARD9Q9P2P6 4700 aa3.15□□□□□ -1.91
ECHDC2-222ENST00000539680 MT1XP80297 61 aa3.15□□□□□ -1.91
ECHDC2-222ENST00000539680 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
ECHDC2-222ENST00000539680 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
ECHDC2-222ENST00000539680 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
ECHDC2-222ENST00000539680 KRTAP19-1Q8IUB9 90 aa3.13□□□□□ -1.91
ECHDC2-222ENST00000539680 MT1GP13640 62 aa3.12□□□□□ -1.91
ECHDC2-222ENST00000539680 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
ECHDC2-222ENST00000539680 KIAA1109Q2LD37 5005 aa3.09□□□□□ -1.91
ECHDC2-222ENST00000539680 RYR1P21817 5038 aa3.09□□□□□ -1.92
ECHDC2-222ENST00000539680 APOBP04114 4563 aaKnown RBP3.08□□□□□ -1.92
ECHDC2-222ENST00000539680 FAT1Q14517 4588 aa3.08□□□□□ -1.92
ECHDC2-222ENST00000539680 FRAS1Q86XX4 4008 aa3.08□□□□□ -1.92
ECHDC2-222ENST00000539680 MT1BP07438 61 aa3.08□□□□□ -1.92
ECHDC2-222ENST00000539680 LRP1Q07954 4544 aaKnown RBP3.07□□□□□ -1.92
ECHDC2-222ENST00000539680 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
ECHDC2-222ENST00000539680 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
ECHDC2-222ENST00000539680 HECTD4Q9Y4D8 3996 aa3.05□□□□□ -1.92
ECHDC2-222ENST00000539680 LCE2AQ5TA79 106 aaPredicted RBP3.04□□□□□ -1.92
ECHDC2-222ENST00000539680 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
ECHDC2-222ENST00000539680 KRTAP9-8Q9BYQ0 159 aa3.03□□□□□ -1.92
ECHDC2-222ENST00000539680 PKHD1L1Q86WI1 4243 aa3.02□□□□□ -1.93
ECHDC2-222ENST00000539680 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
ECHDC2-222ENST00000539680 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
ECHDC2-222ENST00000539680 KMT2AQ03164 3969 aa2.96□□□□□ -1.93
ECHDC2-222ENST00000539680 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.93
ECHDC2-222ENST00000539680 VPS13BQ7Z7G8 4022 aa2.95□□□□□ -1.94
ECHDC2-222ENST00000539680 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
ECHDC2-222ENST00000539680 MT1LQ93083 61 aa2.94□□□□□ -1.94
ECHDC2-222ENST00000539680 KRTAP4-8A0A0G2JLE6 195 aa2.91□□□□□ -1.94
ECHDC2-222ENST00000539680 KRTAP4-8Q9BYQ9 185 aa2.91□□□□□ -1.94
ECHDC2-222ENST00000539680 PKD1P98161 4303 aa2.9□□□□□ -1.94
ECHDC2-222ENST00000539680 ABCA13Q86UQ4 5058 aa2.9□□□□□ -1.95
ECHDC2-222ENST00000539680 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
ECHDC2-222ENST00000539680 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
ECHDC2-222ENST00000539680 PKHD1P08F94 4074 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms