RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 C9orf153Q5TBE3 101 aa3.72□□□□□ -1.81
CD9-207ENST00000538418 ATP11AUNQ6ZP68 121 aa3.72□□□□□ -1.81
CD9-207ENST00000538418 Q6ZRX8 168 aa3.72□□□□□ -1.81
CD9-207ENST00000538418 COPS9Q8WXC6 57 aa3.72□□□□□ -1.81
CD9-207ENST00000538418 INE1O15225 51 aa3.71□□□□□ -1.82
CD9-207ENST00000538418 MT-ATP8P03928 68 aa3.71□□□□□ -1.82
CD9-207ENST00000538418 IFI27L1Q96BM0 104 aa3.71□□□□□ -1.82
CD9-207ENST00000538418 LIMD2Q9BT23 127 aa3.7□□□□□ -1.82
CD9-207ENST00000538418 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
CD9-207ENST00000538418 LOC110117498A0A087WWA1 95 aa3.69□□□□□ -1.82
CD9-207ENST00000538418 COX8AP10176 69 aa3.69□□□□□ -1.82
CD9-207ENST00000538418 S100A7L2Q5SY68 101 aa3.69□□□□□ -1.82
CD9-207ENST00000538418 CYSTM1Q9H1C7 97 aa3.69□□□□□ -1.82
CD9-207ENST00000538418 NCR3O14931 201 aa3.68□□□□□ -1.82
CD9-207ENST00000538418 SPRR1BP22528 89 aa3.68□□□□□ -1.82
CD9-207ENST00000538418 PLNP26678 52 aa3.68□□□□□ -1.82
CD9-207ENST00000538418 ETDBQ3ZM63 59 aa3.68□□□□□ -1.82
CD9-207ENST00000538418 DNAL4O96015 105 aa3.67□□□□□ -1.82
CD9-207ENST00000538418 TRAV23DV6A0A075B6W5 121 aa3.66□□□□□ -1.82
CD9-207ENST00000538418 IGKV3D-7A0A0C4DH55 119 aa3.65□□□□□ -1.83
CD9-207ENST00000538418 MT1HP80294 61 aa3.65□□□□□ -1.83
CD9-207ENST00000538418 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
CD9-207ENST00000538418 HIGD1BQ9P298 99 aa3.65□□□□□ -1.83
CD9-207ENST00000538418 LEPROTL1O95214 131 aa3.64□□□□□ -1.83
CD9-207ENST00000538418 KRTAP19-2Q3LHN2 52 aa3.64□□□□□ -1.83
CD9-207ENST00000538418 FLGP20930 4061 aaPredicted RBP3.64□□□□□ -1.83
CD9-207ENST00000538418 JMJD7-PLA2G4BH0Y9G9 81 aa3.63□□□□□ -1.83
CD9-207ENST00000538418 ATOX1O00244 68 aa3.63□□□□□ -1.83
CD9-207ENST00000538418 TEX49A0A1B0GTD5 131 aa3.62□□□□□ -1.83
CD9-207ENST00000538418 IGKCP01834 107 aa3.62□□□□□ -1.83
CD9-207ENST00000538418 LINC01545Q5VT33 79 aa3.62□□□□□ -1.83
CD9-207ENST00000538418 TRBV7-7A0A0K0K1E9 115 aa3.61□□□□□ -1.83
CD9-207ENST00000538418 ACYP1P07311 99 aa3.61□□□□□ -1.83
CD9-207ENST00000538418 M0R2T5 61 aa3.6□□□□□ -1.83
CD9-207ENST00000538418 ELOF1P60002 83 aaKnown RBP3.6□□□□□ -1.83
CD9-207ENST00000538418 NPC2P61916 151 aa3.6□□□□□ -1.83
CD9-207ENST00000538418 SERP1Q9Y6X1 66 aa3.6□□□□□ -1.83
CD9-207ENST00000538418 COX7BP24311 80 aa3.59□□□□□ -1.83
CD9-207ENST00000538418 CSAG1Q6PB30 78 aa3.59□□□□□ -1.83
CD9-207ENST00000538418 LINC00308Q8TCZ7 52 aa3.59□□□□□ -1.83
CD9-207ENST00000538418 C9orf92A6NGG3 77 aa3.58□□□□□ -1.84
CD9-207ENST00000538418 RPL37P61927 97 aaKnown RBP3.58□□□□□ -1.84
CD9-207ENST00000538418 COX6B2Q6YFQ2 88 aa3.58□□□□□ -1.84
CD9-207ENST00000538418 IGLV5-48A0A075B6I7 105 aa3.57□□□□□ -1.84
CD9-207ENST00000538418 ATP5EP56381 51 aaPredicted RBP3.57□□□□□ -1.84
CD9-207ENST00000538418 ZNF815PA8K554 130 aa3.56□□□□□ -1.84
CD9-207ENST00000538418 DEFB105AQ8NG35 78 aa3.55□□□□□ -1.84
CD9-207ENST00000538418 OBSCN-AS1Q96MR7 158 aa3.55□□□□□ -1.84
CD9-207ENST00000538418 Q6JHZ5 121 aa3.54□□□□□ -1.84
CD9-207ENST00000538418 LINC00643Q86TS7 51 aa3.54□□□□□ -1.84
CD9-207ENST00000538418 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
CD9-207ENST00000538418 TRAV13-2A0A0B4J235 113 aa3.52□□□□□ -1.85
CD9-207ENST00000538418 F8WEM9 126 aa3.52□□□□□ -1.85
CD9-207ENST00000538418 PDE6GP18545 87 aa3.52□□□□□ -1.85
CD9-207ENST00000538418 ATXN8Q156A1 80 aa3.52□□□□□ -1.85
CD9-207ENST00000538418 hADV29S1A0JD25 119 aa3.51□□□□□ -1.85
CD9-207ENST00000538418 NDUFC1O43677 76 aa3.5□□□□□ -1.85
CD9-207ENST00000538418 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
CD9-207ENST00000538418 DSCR8Q96T75 97 aa3.5□□□□□ -1.85
CD9-207ENST00000538418 COX6CP09669 75 aa3.48□□□□□ -1.85
CD9-207ENST00000538418 DMAC1Q96GE9 116 aa3.48□□□□□ -1.85
CD9-207ENST00000538418 USH2AO75445 5202 aa3.48□□□□□ -1.85
CD9-207ENST00000538418 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
CD9-207ENST00000538418 LINC00575Q6W349 94 aa3.47□□□□□ -1.85
CD9-207ENST00000538418 MUSTN1Q8IVN3 82 aa3.47□□□□□ -1.85
CD9-207ENST00000538418 SMIM11BQ8TCY0 68 aa3.46□□□□□ -1.86
CD9-207ENST00000538418 Q6ZQY7 126 aa3.44□□□□□ -1.86
CD9-207ENST00000538418 Q96NJ1 140 aa3.44□□□□□ -1.86
CD9-207ENST00000538418 PRO1854Q9UHT4 67 aa3.44□□□□□ -1.86
CD9-207ENST00000538418 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
CD9-207ENST00000538418 RBM3P98179 157 aaKnown RBP3.42□□□□□ -1.86
CD9-207ENST00000538418 ATP5EP2Q5VTU8 51 aa3.42□□□□□ -1.86
CD9-207ENST00000538418 LINC00846Q9NV44 126 aa3.42□□□□□ -1.86
CD9-207ENST00000538418 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
CD9-207ENST00000538418 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
CD9-207ENST00000538418 H0YGX0 51 aa3.4□□□□□ -1.87
CD9-207ENST00000538418 CCKP06307 115 aa3.39□□□□□ -1.87
CD9-207ENST00000538418 KLKP1Q107X0 134 aa3.38□□□□□ -1.87
CD9-207ENST00000538418 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
CD9-207ENST00000538418 H7BZZ5 65 aa3.36□□□□□ -1.87
CD9-207ENST00000538418 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
CD9-207ENST00000538418 C20orf197Q8N268 126 aa3.36□□□□□ -1.87
CD9-207ENST00000538418 MT2AP02795 61 aa3.35□□□□□ -1.87
CD9-207ENST00000538418 TRBV7-4A0A0J9YYF1 115 aa3.34□□□□□ -1.87
CD9-207ENST00000538418 MT1FP04733 61 aa3.31□□□□□ -1.88
CD9-207ENST00000538418 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
CD9-207ENST00000538418 LOC101927531A0A1B0GV80 90 aa3.3□□□□□ -1.88
CD9-207ENST00000538418 CYP4F30PQ9H0H9 118 aa3.3□□□□□ -1.88
CD9-207ENST00000538418 LINC00472Q9H8W2 130 aa3.3□□□□□ -1.88
CD9-207ENST00000538418 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
CD9-207ENST00000538418 UBL5Q9BZL1 73 aa3.28□□□□□ -1.88
CD9-207ENST00000538418 SPINK7P58062 85 aa3.25□□□□□ -1.89
CD9-207ENST00000538418 A0A087WVE0 104 aa3.24□□□□□ -1.89
CD9-207ENST00000538418 NDUFB1O75438 58 aa3.24□□□□□ -1.89
CD9-207ENST00000538418 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
CD9-207ENST00000538418 SPTSSBQ8NFR3 76 aa3.23□□□□□ -1.89
CD9-207ENST00000538418 TRAV22A0A0B4J277 110 aa3.21□□□□□ -1.9
CD9-207ENST00000538418 HCG22E2RYF7 251 aa3.21□□□□□ -1.9
CD9-207ENST00000538418 CHKB-CPT1BH3BT56 60 aa3.2□□□□□ -1.9
CD9-207ENST00000538418 LINC00208Q96KT6 92 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms