RNA–Protein interactions for RNA: ENST00000538243.1

KDM2B-207, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 4,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-207ENST00000538243 LRP1BQ9NZR2 4599 aa7.81□□□□□ -1.16
KDM2B-207ENST00000538243 KRTAP21-3Q3LHN1 58 aa7.8□□□□□ -1.16
KDM2B-207ENST00000538243 FAT1Q14517 4588 aa7.79□□□□□ -1.16
KDM2B-207ENST00000538243 KRTAP15-1Q3LI76 137 aa7.79□□□□□ -1.16
KDM2B-207ENST00000538243 DNHD1Q96M86 4753 aa7.77□□□□□ -1.17
KDM2B-207ENST00000538243 KRTAP10-4P60372 401 aaPredicted RBP7.76□□□□□ -1.17
KDM2B-207ENST00000538243 KMT2AQ03164 3969 aa7.75□□□□□ -1.17
KDM2B-207ENST00000538243 VPS13DQ5THJ4 4388 aa7.73□□□□□ -1.17
KDM2B-207ENST00000538243 FRAS1Q86XX4 4008 aa7.73□□□□□ -1.17
KDM2B-207ENST00000538243 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
KDM2B-207ENST00000538243 DNAH2Q9P225 4427 aa7.68□□□□□ -1.18
KDM2B-207ENST00000538243 PRKDCP78527 4128 aaKnown RBP7.67□□□□□ -1.18
KDM2B-207ENST00000538243 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
KDM2B-207ENST00000538243 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
KDM2B-207ENST00000538243 DNAH7Q8WXX0 4024 aa7.56□□□□□ -1.2
KDM2B-207ENST00000538243 ALMS1Q8TCU4 4167 aa7.55□□□□□ -1.2
KDM2B-207ENST00000538243 KRTAP10-10P60014 251 aa7.52□□□□□ -1.21
KDM2B-207ENST00000538243 VPS13BQ7Z7G8 4022 aa7.51□□□□□ -1.21
KDM2B-207ENST00000538243 DNAH6Q9C0G6 4158 aa7.5□□□□□ -1.21
KDM2B-207ENST00000538243 CMYA5Q8N3K9 4069 aa7.5□□□□□ -1.21
KDM2B-207ENST00000538243 DYNC1H1Q14204 4646 aaKnown RBP7.5□□□□□ -1.21
KDM2B-207ENST00000538243 DNAH3Q8TD57 4116 aa7.49□□□□□ -1.21
KDM2B-207ENST00000538243 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
KDM2B-207ENST00000538243 HECTD4Q9Y4D8 3996 aa7.39□□□□□ -1.23
KDM2B-207ENST00000538243 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
KDM2B-207ENST00000538243 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
KDM2B-207ENST00000538243 FAT3Q8TDW7 4589 aa7.34□□□□□ -1.23
KDM2B-207ENST00000538243 SACSQ9NZJ4 4579 aa7.32□□□□□ -1.24
KDM2B-207ENST00000538243 LRP1Q07954 4544 aaKnown RBP7.31□□□□□ -1.24
KDM2B-207ENST00000538243 DYNC2H1Q8NCM8 4307 aaKnown RBP7.3□□□□□ -1.24
KDM2B-207ENST00000538243 RYR1P21817 5038 aa7.28□□□□□ -1.24
KDM2B-207ENST00000538243 KIAA1109Q2LD37 5005 aa7.21□□□□□ -1.26
KDM2B-207ENST00000538243 PKHD1P08F94 4074 aa7.14□□□□□ -1.27
KDM2B-207ENST00000538243 HYDINQ4G0P3 5121 aa7.13□□□□□ -1.27
KDM2B-207ENST00000538243 FAT2Q9NYQ8 4349 aa7.13□□□□□ -1.27
KDM2B-207ENST00000538243 KRTAP4-1Q9BYQ7 146 aa7.07□□□□□ -1.28
KDM2B-207ENST00000538243 LRP2P98164 4655 aa7.05□□□□□ -1.28
KDM2B-207ENST00000538243 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
KDM2B-207ENST00000538243 RYR3Q15413 4870 aa6.98□□□□□ -1.29
KDM2B-207ENST00000538243 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
KDM2B-207ENST00000538243 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.3
KDM2B-207ENST00000538243 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
KDM2B-207ENST00000538243 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
KDM2B-207ENST00000538243 HSPG2P98160 4391 aa6.8□□□□□ -1.32
KDM2B-207ENST00000538243 KMT2CQ8NEZ4 4911 aaKnown RBP6.8□□□□□ -1.32
KDM2B-207ENST00000538243 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
KDM2B-207ENST00000538243 INE1O15225 51 aa6.74□□□□□ -1.33
KDM2B-207ENST00000538243 PKD1P98161 4303 aa6.73□□□□□ -1.33
KDM2B-207ENST00000538243 LPAP08519 4548 aa6.67□□□□□ -1.34
KDM2B-207ENST00000538243 RYR2Q92736 4967 aa6.65□□□□□ -1.35
KDM2B-207ENST00000538243 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
KDM2B-207ENST00000538243 HERC2O95714 4834 aa6.51□□□□□ -1.37
KDM2B-207ENST00000538243 MT2AP02795 61 aa6.47□□□□□ -1.37
KDM2B-207ENST00000538243 PKHD1L1Q86WI1 4243 aa6.46□□□□□ -1.38
KDM2B-207ENST00000538243 MT1FP04733 61 aa6.45□□□□□ -1.38
KDM2B-207ENST00000538243 MT1HP80294 61 aa6.45□□□□□ -1.38
KDM2B-207ENST00000538243 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
KDM2B-207ENST00000538243 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
KDM2B-207ENST00000538243 TNXBP22105 4242 aa6.38□□□□□ -1.39
KDM2B-207ENST00000538243 EPPK1P58107 5090 aaKnown RBP6.38□□□□□ -1.39
KDM2B-207ENST00000538243 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
KDM2B-207ENST00000538243 MUC2Q02817 5179 aa6.27□□□□□ -1.41
KDM2B-207ENST00000538243 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
KDM2B-207ENST00000538243 ABCA13Q86UQ4 5058 aa6.23□□□□□ -1.41
KDM2B-207ENST00000538243 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
KDM2B-207ENST00000538243 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
KDM2B-207ENST00000538243 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
KDM2B-207ENST00000538243 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
KDM2B-207ENST00000538243 MT1XP80297 61 aa6.11□□□□□ -1.43
KDM2B-207ENST00000538243 PCLOQ9Y6V0 5065 aa6.1□□□□□ -1.43
KDM2B-207ENST00000538243 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
KDM2B-207ENST00000538243 LCE2CQ5TA81 110 aa6.09□□□□□ -1.43
KDM2B-207ENST00000538243 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.43
KDM2B-207ENST00000538243 KRTAP10-5P60370 271 aa6.09□□□□□ -1.44
KDM2B-207ENST00000538243 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
KDM2B-207ENST00000538243 MT1BP07438 61 aa6.05□□□□□ -1.44
KDM2B-207ENST00000538243 UBR4Q5T4S7 5183 aa6.04□□□□□ -1.44
KDM2B-207ENST00000538243 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
KDM2B-207ENST00000538243 KRTAP9-8Q9BYQ0 159 aa6.02□□□□□ -1.45
KDM2B-207ENST00000538243 HERC1Q15751 4861 aa6.01□□□□□ -1.45
KDM2B-207ENST00000538243 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
KDM2B-207ENST00000538243 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
KDM2B-207ENST00000538243 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
KDM2B-207ENST00000538243 HMCN2Q8NDA2 5059 aa5.87□□□□□ -1.47
KDM2B-207ENST00000538243 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.47
KDM2B-207ENST00000538243 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.48
KDM2B-207ENST00000538243 KRTAP9-3Q9BYQ3 159 aa5.77□□□□□ -1.49
KDM2B-207ENST00000538243 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
KDM2B-207ENST00000538243 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
KDM2B-207ENST00000538243 OBSCNQ5VST9 7968 aa5.76□□□□□ -1.49
KDM2B-207ENST00000538243 LCE2BO14633 110 aa5.6□□□□□ -1.51
KDM2B-207ENST00000538243 MT1GP13640 62 aa5.58□□□□□ -1.52
KDM2B-207ENST00000538243 KRTAP12-4P60329 112 aa5.58□□□□□ -1.52
KDM2B-207ENST00000538243 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
KDM2B-207ENST00000538243 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
KDM2B-207ENST00000538243 USH2AO75445 5202 aa5.45□□□□□ -1.54
KDM2B-207ENST00000538243 KMT2DO14686 5537 aa5.44□□□□□ -1.54
KDM2B-207ENST00000538243 DSTQ03001 7570 aaKnown RBP5.43□□□□□ -1.54
KDM2B-207ENST00000538243 MT1LQ93083 61 aa5.42□□□□□ -1.54
KDM2B-207ENST00000538243 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms