RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 VPS13DQ5THJ4 4388 aa5.2□□□□□ -1.58
LINC00346-201ENST00000538077 STARD9Q9P2P6 4700 aa5.18□□□□□ -1.58
LINC00346-201ENST00000538077 DNAH2Q9P225 4427 aa5.15□□□□□ -1.58
LINC00346-201ENST00000538077 DNAH17Q9UFH2 4485 aa5.15□□□□□ -1.59
LINC00346-201ENST00000538077 HECTD4Q9Y4D8 3996 aa5.14□□□□□ -1.59
LINC00346-201ENST00000538077 MT1HL1P0DM35 61 aa5.12□□□□□ -1.59
LINC00346-201ENST00000538077 DNAH11Q96DT5 4516 aa5.1□□□□□ -1.59
LINC00346-201ENST00000538077 TENM3Q9P273 2699 aa5.1□□□□□ -1.59
LINC00346-201ENST00000538077 VWFP04275 2813 aa5.09□□□□□ -1.59
LINC00346-201ENST00000538077 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
LINC00346-201ENST00000538077 PKD1L1Q8TDX9 2849 aa5.07□□□□□ -1.6
LINC00346-201ENST00000538077 DNAH8Q96JB1 4490 aa5.07□□□□□ -1.6
LINC00346-201ENST00000538077 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
LINC00346-201ENST00000538077 INE1O15225 51 aa5.03□□□□□ -1.6
LINC00346-201ENST00000538077 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
LINC00346-201ENST00000538077 VPS13BQ7Z7G8 4022 aa4.99□□□□□ -1.61
LINC00346-201ENST00000538077 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
LINC00346-201ENST00000538077 KRTAP3-3Q9BYR6 98 aa4.94□□□□□ -1.62
LINC00346-201ENST00000538077 PKHD1L1Q86WI1 4243 aa4.92□□□□□ -1.62
LINC00346-201ENST00000538077 KRTAP10-4P60372 401 aaPredicted RBP4.89□□□□□ -1.63
LINC00346-201ENST00000538077 KRTAP3-2Q9BYR7 98 aa4.89□□□□□ -1.63
LINC00346-201ENST00000538077 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
LINC00346-201ENST00000538077 PKD1P98161 4303 aa4.86□□□□□ -1.63
LINC00346-201ENST00000538077 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
LINC00346-201ENST00000538077 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
LINC00346-201ENST00000538077 LRP1BQ9NZR2 4599 aa4.83□□□□□ -1.64
LINC00346-201ENST00000538077 FBN3Q75N90 2809 aa4.83□□□□□ -1.64
LINC00346-201ENST00000538077 SACSQ9NZJ4 4579 aa4.79□□□□□ -1.64
LINC00346-201ENST00000538077 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
LINC00346-201ENST00000538077 MEGF8Q7Z7M0 2845 aa4.75□□□□□ -1.65
LINC00346-201ENST00000538077 HYDINQ4G0P3 5121 aa4.74□□□□□ -1.65
LINC00346-201ENST00000538077 DYNC1H1Q14204 4646 aaKnown RBP4.72□□□□□ -1.65
LINC00346-201ENST00000538077 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
LINC00346-201ENST00000538077 APOBP04114 4563 aaKnown RBP4.69□□□□□ -1.66
LINC00346-201ENST00000538077 HSPG2P98160 4391 aa4.69□□□□□ -1.66
LINC00346-201ENST00000538077 TNXBP22105 4242 aa4.67□□□□□ -1.66
LINC00346-201ENST00000538077 PKHD1P08F94 4074 aa4.67□□□□□ -1.66
LINC00346-201ENST00000538077 COL7A1Q02388 2944 aa4.66□□□□□ -1.66
LINC00346-201ENST00000538077 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
LINC00346-201ENST00000538077 DNHD1Q96M86 4753 aa4.61□□□□□ -1.67
LINC00346-201ENST00000538077 MT1HP80294 61 aa4.61□□□□□ -1.67
LINC00346-201ENST00000538077 KRTAP17-1Q9BYP8 105 aa4.57□□□□□ -1.68
LINC00346-201ENST00000538077 SRRM2Q9UQ35 2752 aaKnown RBP4.55□□□□□ -1.68
LINC00346-201ENST00000538077 FAT1Q14517 4588 aa4.55□□□□□ -1.68
LINC00346-201ENST00000538077 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
LINC00346-201ENST00000538077 LPAP08519 4548 aa4.48□□□□□ -1.69
LINC00346-201ENST00000538077 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
LINC00346-201ENST00000538077 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
LINC00346-201ENST00000538077 MT2AP02795 61 aa4.46□□□□□ -1.7
LINC00346-201ENST00000538077 MT1FP04733 61 aa4.4□□□□□ -1.71
LINC00346-201ENST00000538077 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
LINC00346-201ENST00000538077 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
LINC00346-201ENST00000538077 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
LINC00346-201ENST00000538077 RYR2Q92736 4967 aa4.35□□□□□ -1.71
LINC00346-201ENST00000538077 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
LINC00346-201ENST00000538077 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
LINC00346-201ENST00000538077 SPRR2EP22531 72 aa4.28□□□□□ -1.72
LINC00346-201ENST00000538077 SPRR2BP35325 72 aa4.28□□□□□ -1.72
LINC00346-201ENST00000538077 SPRR2AP35326 72 aa4.28□□□□□ -1.72
LINC00346-201ENST00000538077 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
LINC00346-201ENST00000538077 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
LINC00346-201ENST00000538077 RYR3Q15413 4870 aa4.2□□□□□ -1.74
LINC00346-201ENST00000538077 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
LINC00346-201ENST00000538077 RYR1P21817 5038 aa4.13□□□□□ -1.75
LINC00346-201ENST00000538077 SPRR2DP22532 72 aa4.13□□□□□ -1.75
LINC00346-201ENST00000538077 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
LINC00346-201ENST00000538077 KMT2CQ8NEZ4 4911 aaKnown RBP4.09□□□□□ -1.75
LINC00346-201ENST00000538077 MT1GP13640 62 aa4.07□□□□□ -1.76
LINC00346-201ENST00000538077 HERC1Q15751 4861 aa4.07□□□□□ -1.76
LINC00346-201ENST00000538077 LCE2BO14633 110 aa4.02□□□□□ -1.77
LINC00346-201ENST00000538077 KRTAP4-8A0A0G2JLE6 195 aa3.98□□□□□ -1.77
LINC00346-201ENST00000538077 KRTAP4-8Q9BYQ9 185 aa3.98□□□□□ -1.77
LINC00346-201ENST00000538077 MT1XP80297 61 aa3.97□□□□□ -1.77
LINC00346-201ENST00000538077 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
LINC00346-201ENST00000538077 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
LINC00346-201ENST00000538077 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
LINC00346-201ENST00000538077 FLGP20930 4061 aaPredicted RBP3.9□□□□□ -1.79
LINC00346-201ENST00000538077 LRP2P98164 4655 aa3.89□□□□□ -1.79
LINC00346-201ENST00000538077 MT1BP07438 61 aa3.89□□□□□ -1.79
LINC00346-201ENST00000538077 KRTAP9-8Q9BYQ0 159 aa3.88□□□□□ -1.79
LINC00346-201ENST00000538077 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
LINC00346-201ENST00000538077 HERC2O95714 4834 aa3.86□□□□□ -1.79
LINC00346-201ENST00000538077 LCE2CQ5TA81 110 aa3.86□□□□□ -1.79
LINC00346-201ENST00000538077 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
LINC00346-201ENST00000538077 KIAA1109Q2LD37 5005 aa3.81□□□□□ -1.8
LINC00346-201ENST00000538077 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
LINC00346-201ENST00000538077 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
LINC00346-201ENST00000538077 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
LINC00346-201ENST00000538077 MT4P47944 62 aa3.75□□□□□ -1.81
LINC00346-201ENST00000538077 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
LINC00346-201ENST00000538077 KRTAP19-2Q3LHN2 52 aa3.73□□□□□ -1.81
LINC00346-201ENST00000538077 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
LINC00346-201ENST00000538077 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
LINC00346-201ENST00000538077 PCLOQ9Y6V0 5065 aa3.7□□□□□ -1.82
LINC00346-201ENST00000538077 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
LINC00346-201ENST00000538077 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
LINC00346-201ENST00000538077 ABCA13Q86UQ4 5058 aa3.63□□□□□ -1.83
LINC00346-201ENST00000538077 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
LINC00346-201ENST00000538077 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
LINC00346-201ENST00000538077 MT1LQ93083 61 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms