RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 C1orf64Q8NEQ6 169 aa6□□□□□ -1.45
RTN3-207ENST00000536011 LOC105371267A0A1B0GV96 52 aa5.98□□□□□ -1.45
RTN3-207ENST00000536011 K7EP34 96 aa5.97□□□□□ -1.45
RTN3-207ENST00000536011 PRO0461Q9UI25 63 aa5.97□□□□□ -1.45
RTN3-207ENST00000536011 Q5VV11 94 aa5.96□□□□□ -1.46
RTN3-207ENST00000536011 LCA10Q71F78 164 aa5.96□□□□□ -1.46
RTN3-207ENST00000536011 A6NN06 94 aa5.94□□□□□ -1.46
RTN3-207ENST00000536011 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
RTN3-207ENST00000536011 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
RTN3-207ENST00000536011 GTF2H5Q6ZYL4 71 aa5.91□□□□□ -1.46
RTN3-207ENST00000536011 KLKP1Q107X0 134 aa5.89□□□□□ -1.47
RTN3-207ENST00000536011 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
RTN3-207ENST00000536011 F8W1H4 67 aa5.88□□□□□ -1.47
RTN3-207ENST00000536011 MT1BP07438 61 aa5.88□□□□□ -1.47
RTN3-207ENST00000536011 CYP4F30PQ9H0H9 118 aa5.86□□□□□ -1.47
RTN3-207ENST00000536011 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
RTN3-207ENST00000536011 LOC101927531A0A1B0GV80 90 aa5.85□□□□□ -1.47
RTN3-207ENST00000536011 CRIPTQ9P021 101 aa5.85□□□□□ -1.47
RTN3-207ENST00000536011 ETDBQ3ZM63 59 aa5.84□□□□□ -1.47
RTN3-207ENST00000536011 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
RTN3-207ENST00000536011 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
RTN3-207ENST00000536011 NEBP20929 6669 aa5.8□□□□□ -1.48
RTN3-207ENST00000536011 ACYP1P07311 99 aa5.79□□□□□ -1.48
RTN3-207ENST00000536011 ATP5EP2Q5VTU8 51 aa5.79□□□□□ -1.48
RTN3-207ENST00000536011 IMUPQ9GZP8 106 aa5.79□□□□□ -1.48
RTN3-207ENST00000536011 ATOX1O00244 68 aa5.78□□□□□ -1.48
RTN3-207ENST00000536011 NDUFC1O43677 76 aa5.76□□□□□ -1.49
RTN3-207ENST00000536011 UQCRQO14949 82 aa5.75□□□□□ -1.49
RTN3-207ENST00000536011 FAM240AA0A1B0GVK7 77 aa5.74□□□□□ -1.49
RTN3-207ENST00000536011 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
RTN3-207ENST00000536011 A0A087WVE0 104 aa5.73□□□□□ -1.49
RTN3-207ENST00000536011 H0Y9P7 68 aa5.73□□□□□ -1.49
RTN3-207ENST00000536011 H0YAA0 97 aa5.73□□□□□ -1.49
RTN3-207ENST00000536011 A8MUN3 132 aa5.72□□□□□ -1.49
RTN3-207ENST00000536011 MDN1Q9NU22 5596 aa5.71□□□□□ -1.5
RTN3-207ENST00000536011 PCP4L1A6NKN8 68 aa5.68□□□□□ -1.5
RTN3-207ENST00000536011 KRTAP5-9P26371 169 aa5.68□□□□□ -1.5
RTN3-207ENST00000536011 PCP4P48539 62 aa5.68□□□□□ -1.5
RTN3-207ENST00000536011 KMT2DO14686 5537 aa5.68□□□□□ -1.5
RTN3-207ENST00000536011 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
RTN3-207ENST00000536011 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
RTN3-207ENST00000536011 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
RTN3-207ENST00000536011 MP68P56378 58 aa5.62□□□□□ -1.51
RTN3-207ENST00000536011 LINC00208Q96KT6 92 aa5.62□□□□□ -1.51
RTN3-207ENST00000536011 LINC00643Q86TS7 51 aa5.61□□□□□ -1.51
RTN3-207ENST00000536011 C20orf197Q8N268 126 aa5.58□□□□□ -1.52
RTN3-207ENST00000536011 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
RTN3-207ENST00000536011 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
RTN3-207ENST00000536011 R4GN34 69 aa5.55□□□□□ -1.52
RTN3-207ENST00000536011 OCR1Q9BZK8 76 aa5.54□□□□□ -1.52
RTN3-207ENST00000536011 H3BPC8 53 aa5.51□□□□□ -1.53
RTN3-207ENST00000536011 MT1XP80297 61 aa5.5□□□□□ -1.53
RTN3-207ENST00000536011 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
RTN3-207ENST00000536011 M0QZ58 72 aa5.47□□□□□ -1.53
RTN3-207ENST00000536011 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
RTN3-207ENST00000536011 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
RTN3-207ENST00000536011 P0C880 135 aa5.46□□□□□ -1.54
RTN3-207ENST00000536011 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
RTN3-207ENST00000536011 SPRR2EP22531 72 aa5.45□□□□□ -1.54
RTN3-207ENST00000536011 SPRR2BP35325 72 aa5.45□□□□□ -1.54
RTN3-207ENST00000536011 SPRR2AP35326 72 aa5.45□□□□□ -1.54
RTN3-207ENST00000536011 KRTAP8-1Q8IUC2 63 aa5.45□□□□□ -1.54
RTN3-207ENST00000536011 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
RTN3-207ENST00000536011 SCGB1A1P11684 91 aa5.43□□□□□ -1.54
RTN3-207ENST00000536011 J3QR89 54 aa5.42□□□□□ -1.54
RTN3-207ENST00000536011 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
RTN3-207ENST00000536011 TRAV7A0A075B6U4 112 aa5.38□□□□□ -1.55
RTN3-207ENST00000536011 SPTSSBQ8NFR3 76 aa5.35□□□□□ -1.55
RTN3-207ENST00000536011 A0A1B0GV90 55 aa5.34□□□□□ -1.55
RTN3-207ENST00000536011 ACYP2P14621 99 aa5.33□□□□□ -1.56
RTN3-207ENST00000536011 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
RTN3-207ENST00000536011 MT-ATP8P03928 68 aa5.31□□□□□ -1.56
RTN3-207ENST00000536011 SMIM20Q8N5G0 67 aa5.28□□□□□ -1.56
RTN3-207ENST00000536011 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
RTN3-207ENST00000536011 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
RTN3-207ENST00000536011 SPRR2DP22532 72 aa5.27□□□□□ -1.57
RTN3-207ENST00000536011 CHKB-CPT1BH3BT56 60 aa5.26□□□□□ -1.57
RTN3-207ENST00000536011 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
RTN3-207ENST00000536011 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
RTN3-207ENST00000536011 K7ERU9 68 aa5.13□□□□□ -1.59
RTN3-207ENST00000536011 SPANXA2-OT1Q8N9U9 137 aa5.11□□□□□ -1.59
RTN3-207ENST00000536011 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
RTN3-207ENST00000536011 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
RTN3-207ENST00000536011 KRTAP13-4Q3LI77 160 aa5.02□□□□□ -1.61
RTN3-207ENST00000536011 SERP2Q8N6R1 65 aa5□□□□□ -1.61
RTN3-207ENST00000536011 SEC61GP60059 68 aa4.99□□□□□ -1.61
RTN3-207ENST00000536011 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
RTN3-207ENST00000536011 COA5Q86WW8 74 aa4.95□□□□□ -1.62
RTN3-207ENST00000536011 A0A0D9SG42 100 aa4.91□□□□□ -1.62
RTN3-207ENST00000536011 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
RTN3-207ENST00000536011 MT1EP04732 61 aa4.9□□□□□ -1.63
RTN3-207ENST00000536011 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
RTN3-207ENST00000536011 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
RTN3-207ENST00000536011 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
RTN3-207ENST00000536011 A0A1B0GU33 70 aa4.86□□□□□ -1.63
RTN3-207ENST00000536011 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
RTN3-207ENST00000536011 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
RTN3-207ENST00000536011 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.82□□□□□ -1.64
RTN3-207ENST00000536011 CYSTM1Q9H1C7 97 aa4.8□□□□□ -1.64
RTN3-207ENST00000536011 COX7CP15954 63 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms