RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
COPB1-211ENST00000534234 S4R3F8 94 aa4.06□□□□□ -1.76
COPB1-211ENST00000534234 K7EP34 96 aa4.06□□□□□ -1.76
COPB1-211ENST00000534234 TP53AIP1Q9HCN2 124 aa4.05□□□□□ -1.76
COPB1-211ENST00000534234 LCA10Q71F78 164 aa4.04□□□□□ -1.76
COPB1-211ENST00000534234 A6NN06 94 aa4.01□□□□□ -1.77
COPB1-211ENST00000534234 MT1BP07438 61 aa4.01□□□□□ -1.77
COPB1-211ENST00000534234 PCP4P48539 62 aa4.01□□□□□ -1.77
COPB1-211ENST00000534234 Q5VV11 94 aa4.01□□□□□ -1.77
COPB1-211ENST00000534234 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
COPB1-211ENST00000534234 F8W1H4 67 aa4□□□□□ -1.77
COPB1-211ENST00000534234 GTF2H5Q6ZYL4 71 aa4□□□□□ -1.77
COPB1-211ENST00000534234 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
COPB1-211ENST00000534234 ETDBQ3ZM63 59 aa3.99□□□□□ -1.77
COPB1-211ENST00000534234 CYP4F30PQ9H0H9 118 aa3.98□□□□□ -1.77
COPB1-211ENST00000534234 KLKP1Q107X0 134 aa3.97□□□□□ -1.77
COPB1-211ENST00000534234 A0A087WVE0 104 aa3.94□□□□□ -1.78
COPB1-211ENST00000534234 TRAV22A0A0B4J277 110 aa3.93□□□□□ -1.78
COPB1-211ENST00000534234 LOC101927531A0A1B0GV80 90 aa3.93□□□□□ -1.78
COPB1-211ENST00000534234 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
COPB1-211ENST00000534234 CRIPTQ9P021 101 aa3.92□□□□□ -1.78
COPB1-211ENST00000534234 PCP4L1A6NKN8 68 aa3.91□□□□□ -1.78
COPB1-211ENST00000534234 ACYP1P07311 99 aa3.91□□□□□ -1.78
COPB1-211ENST00000534234 IMUPQ9GZP8 106 aa3.9□□□□□ -1.78
COPB1-211ENST00000534234 HIST1H4AP62805 103 aaKnown RBP3.89□□□□□ -1.79
COPB1-211ENST00000534234 UQCRQO14949 82 aa3.89□□□□□ -1.79
COPB1-211ENST00000534234 NDUFC1O43677 76 aa3.89□□□□□ -1.79
COPB1-211ENST00000534234 H0Y9P7 68 aa3.88□□□□□ -1.79
COPB1-211ENST00000534234 ATOX1O00244 68 aa3.87□□□□□ -1.79
COPB1-211ENST00000534234 ATP5EP2Q5VTU8 51 aa3.87□□□□□ -1.79
COPB1-211ENST00000534234 FAM240AA0A1B0GVK7 77 aa3.86□□□□□ -1.79
COPB1-211ENST00000534234 H0YAA0 97 aa3.85□□□□□ -1.79
COPB1-211ENST00000534234 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
COPB1-211ENST00000534234 KRTAP5-9P26371 169 aa3.84□□□□□ -1.8
COPB1-211ENST00000534234 A8MUN3 132 aa3.83□□□□□ -1.8
COPB1-211ENST00000534234 ADM2Q7Z4H4 148 aa3.82□□□□□ -1.8
COPB1-211ENST00000534234 LINC00208Q96KT6 92 aa3.82□□□□□ -1.8
COPB1-211ENST00000534234 NEBP20929 6669 aa3.81□□□□□ -1.8
COPB1-211ENST00000534234 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
COPB1-211ENST00000534234 LINC00643Q86TS7 51 aa3.8□□□□□ -1.8
COPB1-211ENST00000534234 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
COPB1-211ENST00000534234 MP68P56378 58 aa3.78□□□□□ -1.8
COPB1-211ENST00000534234 KMT2DO14686 5537 aa3.76□□□□□ -1.81
COPB1-211ENST00000534234 OCR1Q9BZK8 76 aa3.76□□□□□ -1.81
COPB1-211ENST00000534234 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
COPB1-211ENST00000534234 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
COPB1-211ENST00000534234 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
COPB1-211ENST00000534234 MT1XP80297 61 aa3.74□□□□□ -1.81
COPB1-211ENST00000534234 R4GN34 69 aa3.74□□□□□ -1.81
COPB1-211ENST00000534234 P0C880 135 aa3.72□□□□□ -1.81
COPB1-211ENST00000534234 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
COPB1-211ENST00000534234 C20orf197Q8N268 126 aa3.72□□□□□ -1.81
COPB1-211ENST00000534234 MDN1Q9NU22 5596 aa3.71□□□□□ -1.81
COPB1-211ENST00000534234 H3BPC8 53 aa3.71□□□□□ -1.82
COPB1-211ENST00000534234 M0QZ58 72 aa3.69□□□□□ -1.82
COPB1-211ENST00000534234 DMAC1Q96GE9 116 aa3.69□□□□□ -1.82
COPB1-211ENST00000534234 A0A1B0GV90 55 aa3.68□□□□□ -1.82
COPB1-211ENST00000534234 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
COPB1-211ENST00000534234 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
COPB1-211ENST00000534234 SCGB1A1P11684 91 aa3.68□□□□□ -1.82
COPB1-211ENST00000534234 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
COPB1-211ENST00000534234 SPRR2EP22531 72 aa3.67□□□□□ -1.82
COPB1-211ENST00000534234 SPRR2BP35325 72 aa3.67□□□□□ -1.82
COPB1-211ENST00000534234 SPRR2AP35326 72 aa3.67□□□□□ -1.82
COPB1-211ENST00000534234 KRTAP12-2P59991 146 aa3.66□□□□□ -1.82
COPB1-211ENST00000534234 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
COPB1-211ENST00000534234 J3QR89 54 aa3.65□□□□□ -1.82
COPB1-211ENST00000534234 TRAV7A0A075B6U4 112 aa3.62□□□□□ -1.83
COPB1-211ENST00000534234 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
COPB1-211ENST00000534234 ACYP2P14621 99 aa3.6□□□□□ -1.83
COPB1-211ENST00000534234 MT-ATP8P03928 68 aa3.57□□□□□ -1.84
COPB1-211ENST00000534234 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
COPB1-211ENST00000534234 SPTSSBQ8NFR3 76 aa3.57□□□□□ -1.84
COPB1-211ENST00000534234 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
COPB1-211ENST00000534234 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
COPB1-211ENST00000534234 SPRR2DP22532 72 aa3.55□□□□□ -1.84
COPB1-211ENST00000534234 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
COPB1-211ENST00000534234 SMIM20Q8N5G0 67 aa3.54□□□□□ -1.84
COPB1-211ENST00000534234 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
COPB1-211ENST00000534234 SNURFQ9Y675 71 aa3.49□□□□□ -1.85
COPB1-211ENST00000534234 K7ERU9 68 aa3.47□□□□□ -1.85
COPB1-211ENST00000534234 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
COPB1-211ENST00000534234 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
COPB1-211ENST00000534234 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
COPB1-211ENST00000534234 SERP2Q8N6R1 65 aa3.39□□□□□ -1.87
COPB1-211ENST00000534234 COA5Q86WW8 74 aa3.35□□□□□ -1.87
COPB1-211ENST00000534234 A0A0D9SG42 100 aa3.34□□□□□ -1.87
COPB1-211ENST00000534234 SEC61GP60059 68 aa3.34□□□□□ -1.87
COPB1-211ENST00000534234 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.87
COPB1-211ENST00000534234 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
COPB1-211ENST00000534234 MT1EP04732 61 aa3.32□□□□□ -1.88
COPB1-211ENST00000534234 SPATA8Q6RVD6 105 aa3.31□□□□□ -1.88
COPB1-211ENST00000534234 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
COPB1-211ENST00000534234 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
COPB1-211ENST00000534234 A0A1B0GU33 70 aa3.29□□□□□ -1.88
COPB1-211ENST00000534234 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
COPB1-211ENST00000534234 COX7CP15954 63 aa3.25□□□□□ -1.89
COPB1-211ENST00000534234 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
COPB1-211ENST00000534234 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
COPB1-211ENST00000534234 MT1GP13640 62 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms