RNA–Protein interactions for RNA: ENST00000533660.1

MS4A6A-219, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-219ENST00000533660 Q6ZRN7 208 aaPredicted RBP1.91□□□□□ -2.1
MS4A6A-219ENST00000533660 LAMA5O15230 3695 aa1.9□□□□□ -2.1
MS4A6A-219ENST00000533660 MYO18BQ8IUG5 2567 aa1.9□□□□□ -2.11
MS4A6A-219ENST00000533660 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
MS4A6A-219ENST00000533660 KRTAP13-2Q52LG2 175 aa1.9□□□□□ -2.11
MS4A6A-219ENST00000533660 DNAH1Q9P2D7 4330 aa1.9□□□□□ -2.11
MS4A6A-219ENST00000533660 SRRM2Q9UQ35 2752 aaKnown RBP1.9□□□□□ -2.11
MS4A6A-219ENST00000533660 SVEP1Q4LDE5 3571 aa1.89□□□□□ -2.11
MS4A6A-219ENST00000533660 NIPBLQ6KC79 2804 aaeCLIP1.89□□□□□ -2.11
MS4A6A-219ENST00000533660 INE1O15225 51 aa1.89□□□□□ -2.11
MS4A6A-219ENST00000533660 KRTAP12-1P59990 96 aa1.89□□□□□ -2.11
MS4A6A-219ENST00000533660 TGP01266 2768 aa1.88□□□□□ -2.11
MS4A6A-219ENST00000533660 VPS13CQ709C8 3753 aa1.88□□□□□ -2.11
MS4A6A-219ENST00000533660 MEGF8Q7Z7M0 2845 aa1.88□□□□□ -2.11
MS4A6A-219ENST00000533660 TENM4Q6N022 2769 aa1.87□□□□□ -2.11
MS4A6A-219ENST00000533660 COL6A5A8TX70 2615 aa1.87□□□□□ -2.11
MS4A6A-219ENST00000533660 STAB2Q8WWQ8 2551 aa1.86□□□□□ -2.11
MS4A6A-219ENST00000533660 SPRR5A0A1B0GTR4 108 aa1.86□□□□□ -2.11
MS4A6A-219ENST00000533660 ANK3Q12955 4377 aaKnown RBP1.86□□□□□ -2.11
MS4A6A-219ENST00000533660 NBEAL1Q6ZS30 2694 aa1.85□□□□□ -2.11
MS4A6A-219ENST00000533660 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
MS4A6A-219ENST00000533660 ATRQ13535 2644 aa1.85□□□□□ -2.11
MS4A6A-219ENST00000533660 TENM3Q9P273 2699 aa1.85□□□□□ -2.11
MS4A6A-219ENST00000533660 MUC3AQ02505 3323 aa1.85□□□□□ -2.11
MS4A6A-219ENST00000533660 VWFP04275 2813 aa1.84□□□□□ -2.12
MS4A6A-219ENST00000533660 DMBT1Q9UGM3 2413 aaPredicted RBP1.83□□□□□ -2.12
MS4A6A-219ENST00000533660 FLNCQ14315 2725 aa1.83□□□□□ -2.12
MS4A6A-219ENST00000533660 VPS13DQ5THJ4 4388 aa1.83□□□□□ -2.12
MS4A6A-219ENST00000533660 MAST4O15021 2626 aa1.83□□□□□ -2.12
MS4A6A-219ENST00000533660 TEP1Q99973 2627 aaKnown RBP1.83□□□□□ -2.12
MS4A6A-219ENST00000533660 ITPR2Q14571 2701 aa1.82□□□□□ -2.12
MS4A6A-219ENST00000533660 PKD1L1Q8TDX9 2849 aa1.82□□□□□ -2.12
MS4A6A-219ENST00000533660 NOTCH1P46531 2555 aa1.82□□□□□ -2.12
MS4A6A-219ENST00000533660 C9orf92A6NGG3 77 aa1.82□□□□□ -2.12
MS4A6A-219ENST00000533660 R4GN34 69 aa1.82□□□□□ -2.12
MS4A6A-219ENST00000533660 TRRAPQ9Y4A5 3859 aa1.82□□□□□ -2.12
MS4A6A-219ENST00000533660 CSMD2Q7Z408 3487 aa1.82□□□□□ -2.12
MS4A6A-219ENST00000533660 PDZD2O15018 2839 aa1.81□□□□□ -2.12
MS4A6A-219ENST00000533660 DNAH3Q8TD57 4116 aa1.81□□□□□ -2.12
MS4A6A-219ENST00000533660 USP24Q9UPU5 2620 aa1.8□□□□□ -2.12
MS4A6A-219ENST00000533660 FBN1P35555 2871 aaKnown RBP1.8□□□□□ -2.12
MS4A6A-219ENST00000533660 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
MS4A6A-219ENST00000533660 DNAH8Q96JB1 4490 aa1.79□□□□□ -2.12
MS4A6A-219ENST00000533660 SMR3AQ99954 134 aa1.79□□□□□ -2.12
MS4A6A-219ENST00000533660 MGAM2Q2M2H8 2515 aa1.79□□□□□ -2.12
MS4A6A-219ENST00000533660 FLNBO75369 2602 aaKnown RBP1.79□□□□□ -2.12
MS4A6A-219ENST00000533660 IGSF10Q6WRI0 2623 aa1.78□□□□□ -2.12
MS4A6A-219ENST00000533660 Q5VSD8 79 aa1.77□□□□□ -2.13
MS4A6A-219ENST00000533660 NSD1Q96L73 2696 aaPredicted RBP1.76□□□□□ -2.13
MS4A6A-219ENST00000533660 DNAH10Q8IVF4 4471 aa1.76□□□□□ -2.13
MS4A6A-219ENST00000533660 COL7A1Q02388 2944 aa1.75□□□□□ -2.13
MS4A6A-219ENST00000533660 ANK2Q01484 3957 aa1.75□□□□□ -2.13
MS4A6A-219ENST00000533660 J3QKU1 62 aa1.75□□□□□ -2.13
MS4A6A-219ENST00000533660 PRKDCP78527 4128 aaKnown RBP1.75□□□□□ -2.13
MS4A6A-219ENST00000533660 DNAH17Q9UFH2 4485 aa1.75□□□□□ -2.13
MS4A6A-219ENST00000533660 DYNC2H1Q8NCM8 4307 aaKnown RBP1.75□□□□□ -2.13
MS4A6A-219ENST00000533660 DNAH6Q9C0G6 4158 aa1.73□□□□□ -2.13
MS4A6A-219ENST00000533660 CUBNO60494 3623 aa1.73□□□□□ -2.13
MS4A6A-219ENST00000533660 TENM1Q9UKZ4 2725 aa1.73□□□□□ -2.13
MS4A6A-219ENST00000533660 CMYA5Q8N3K9 4069 aa1.73□□□□□ -2.13
MS4A6A-219ENST00000533660 DNAH7Q8WXX0 4024 aa1.73□□□□□ -2.13
MS4A6A-219ENST00000533660 STAB1Q9NY15 2570 aa1.73□□□□□ -2.13
MS4A6A-219ENST00000533660 LYSTQ99698 3801 aa1.72□□□□□ -2.13
MS4A6A-219ENST00000533660 TNP1P09430 55 aa1.72□□□□□ -2.13
MS4A6A-219ENST00000533660 DNAH11Q96DT5 4516 aa1.71□□□□□ -2.14
MS4A6A-219ENST00000533660 HECTD4Q9Y4D8 3996 aa1.71□□□□□ -2.14
MS4A6A-219ENST00000533660 HUWE1Q7Z6Z7 4374 aaKnown RBP1.71□□□□□ -2.14
MS4A6A-219ENST00000533660 FBN3Q75N90 2809 aa1.71□□□□□ -2.14
MS4A6A-219ENST00000533660 DNAH9Q9NYC9 4486 aa1.7□□□□□ -2.14
MS4A6A-219ENST00000533660 CSMD3Q7Z407 3707 aa1.69□□□□□ -2.14
MS4A6A-219ENST00000533660 DNAH2Q9P225 4427 aa1.69□□□□□ -2.14
MS4A6A-219ENST00000533660 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
MS4A6A-219ENST00000533660 ZNF469Q96JG9 3925 aaPredicted RBP1.67□□□□□ -2.14
MS4A6A-219ENST00000533660 SACSQ9NZJ4 4579 aa1.66□□□□□ -2.14
MS4A6A-219ENST00000533660 DNHD1Q96M86 4753 aa1.64□□□□□ -2.15
MS4A6A-219ENST00000533660 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
MS4A6A-219ENST00000533660 PLECQ15149 4684 aaKnown RBP1.61□□□□□ -2.15
MS4A6A-219ENST00000533660 KMT2AQ03164 3969 aa1.58□□□□□ -2.16
MS4A6A-219ENST00000533660 VPS13BQ7Z7G8 4022 aa1.58□□□□□ -2.16
MS4A6A-219ENST00000533660 KRTAP21-3Q3LHN1 58 aa1.58□□□□□ -2.16
MS4A6A-219ENST00000533660 DNAH5Q8TE73 4624 aa1.58□□□□□ -2.16
MS4A6A-219ENST00000533660 PKHD1P08F94 4074 aa1.57□□□□□ -2.16
MS4A6A-219ENST00000533660 APOBP04114 4563 aaKnown RBP1.57□□□□□ -2.16
MS4A6A-219ENST00000533660 MYCBP2O75592 4640 aa1.56□□□□□ -2.16
MS4A6A-219ENST00000533660 LRP1Q07954 4544 aaKnown RBP1.56□□□□□ -2.16
MS4A6A-219ENST00000533660 STARD9Q9P2P6 4700 aa1.55□□□□□ -2.16
MS4A6A-219ENST00000533660 KRTAP10-4P60372 401 aaPredicted RBP1.55□□□□□ -2.16
MS4A6A-219ENST00000533660 LRP1BQ9NZR2 4599 aa1.55□□□□□ -2.16
MS4A6A-219ENST00000533660 TNXBP22105 4242 aa1.55□□□□□ -2.16
MS4A6A-219ENST00000533660 DYNC1H1Q14204 4646 aaKnown RBP1.54□□□□□ -2.16
MS4A6A-219ENST00000533660 PKD1P98161 4303 aa1.54□□□□□ -2.16
MS4A6A-219ENST00000533660 SMR3BP02814 79 aaPredicted RBP1.54□□□□□ -2.16
MS4A6A-219ENST00000533660 UBR4Q5T4S7 5183 aa1.54□□□□□ -2.16
MS4A6A-219ENST00000533660 HSPG2P98160 4391 aa1.52□□□□□ -2.17
MS4A6A-219ENST00000533660 FLGP20930 4061 aaPredicted RBP1.52□□□□□ -2.17
MS4A6A-219ENST00000533660 FAT2Q9NYQ8 4349 aa1.52□□□□□ -2.17
MS4A6A-219ENST00000533660 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
MS4A6A-219ENST00000533660 PCLOQ9Y6V0 5065 aa1.51□□□□□ -2.17
MS4A6A-219ENST00000533660 KRTAP8-1Q8IUC2 63 aa1.5□□□□□ -2.17
MS4A6A-219ENST00000533660 FAT3Q8TDW7 4589 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms