RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
RAD50-209ENST00000533482 ANK2Q01484 3957 aa6.03□□□□□ -1.44
RAD50-209ENST00000533482 VPS13DQ5THJ4 4388 aa6□□□□□ -1.45
RAD50-209ENST00000533482 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
RAD50-209ENST00000533482 LRP1BQ9NZR2 4599 aa5.99□□□□□ -1.45
RAD50-209ENST00000533482 LYSTQ99698 3801 aa5.98□□□□□ -1.45
RAD50-209ENST00000533482 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
RAD50-209ENST00000533482 KMT2AQ03164 3969 aa5.98□□□□□ -1.45
RAD50-209ENST00000533482 KRTAP3-3Q9BYR6 98 aa5.94□□□□□ -1.46
RAD50-209ENST00000533482 DNAH17Q9UFH2 4485 aa5.94□□□□□ -1.46
RAD50-209ENST00000533482 DYNC1H1Q14204 4646 aaKnown RBP5.92□□□□□ -1.46
RAD50-209ENST00000533482 RYR1P21817 5038 aa5.91□□□□□ -1.46
RAD50-209ENST00000533482 KIAA1109Q2LD37 5005 aa5.9□□□□□ -1.46
RAD50-209ENST00000533482 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.47
RAD50-209ENST00000533482 DNAH2Q9P225 4427 aa5.88□□□□□ -1.47
RAD50-209ENST00000533482 PP632Q6XCG6 107 aa5.87□□□□□ -1.47
RAD50-209ENST00000533482 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
RAD50-209ENST00000533482 ALMS1Q8TCU4 4167 aa5.77□□□□□ -1.49
RAD50-209ENST00000533482 SACSQ9NZJ4 4579 aa5.75□□□□□ -1.49
RAD50-209ENST00000533482 FAT3Q8TDW7 4589 aa5.74□□□□□ -1.49
RAD50-209ENST00000533482 VPS13BQ7Z7G8 4022 aa5.73□□□□□ -1.49
RAD50-209ENST00000533482 RYR3Q15413 4870 aa5.73□□□□□ -1.49
RAD50-209ENST00000533482 FRAS1Q86XX4 4008 aa5.73□□□□□ -1.49
RAD50-209ENST00000533482 DNAH7Q8WXX0 4024 aa5.71□□□□□ -1.5
RAD50-209ENST00000533482 DNAH3Q8TD57 4116 aa5.7□□□□□ -1.5
RAD50-209ENST00000533482 CMYA5Q8N3K9 4069 aa5.7□□□□□ -1.5
RAD50-209ENST00000533482 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
RAD50-209ENST00000533482 DNAH6Q9C0G6 4158 aa5.69□□□□□ -1.5
RAD50-209ENST00000533482 DYNC2H1Q8NCM8 4307 aaKnown RBP5.68□□□□□ -1.5
RAD50-209ENST00000533482 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
RAD50-209ENST00000533482 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
RAD50-209ENST00000533482 HYDINQ4G0P3 5121 aa5.64□□□□□ -1.51
RAD50-209ENST00000533482 APOBP04114 4563 aaKnown RBP5.63□□□□□ -1.51
RAD50-209ENST00000533482 FAT2Q9NYQ8 4349 aa5.61□□□□□ -1.51
RAD50-209ENST00000533482 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
RAD50-209ENST00000533482 KRTAP4-1Q9BYQ7 146 aa5.58□□□□□ -1.52
RAD50-209ENST00000533482 HECTD4Q9Y4D8 3996 aa5.56□□□□□ -1.52
RAD50-209ENST00000533482 PKHD1P08F94 4074 aa5.55□□□□□ -1.52
RAD50-209ENST00000533482 KMT2CQ8NEZ4 4911 aaKnown RBP5.5□□□□□ -1.53
RAD50-209ENST00000533482 RYR2Q92736 4967 aa5.46□□□□□ -1.54
RAD50-209ENST00000533482 LRP2P98164 4655 aa5.46□□□□□ -1.54
RAD50-209ENST00000533482 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
RAD50-209ENST00000533482 HERC2O95714 4834 aa5.43□□□□□ -1.54
RAD50-209ENST00000533482 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
RAD50-209ENST00000533482 HSPG2P98160 4391 aa5.24□□□□□ -1.57
RAD50-209ENST00000533482 MT1HP80294 61 aa5.23□□□□□ -1.57
RAD50-209ENST00000533482 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
RAD50-209ENST00000533482 PKD1P98161 4303 aa5.2□□□□□ -1.58
RAD50-209ENST00000533482 EPPK1P58107 5090 aaKnown RBP5.2□□□□□ -1.58
RAD50-209ENST00000533482 LPAP08519 4548 aa5.2□□□□□ -1.58
RAD50-209ENST00000533482 PCLOQ9Y6V0 5065 aa5.18□□□□□ -1.58
RAD50-209ENST00000533482 MT2AP02795 61 aa5.16□□□□□ -1.58
RAD50-209ENST00000533482 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
RAD50-209ENST00000533482 MT1FP04733 61 aa5.12□□□□□ -1.59
RAD50-209ENST00000533482 BIRC6Q9NR09 4857 aa5.1□□□□□ -1.59
RAD50-209ENST00000533482 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.6
RAD50-209ENST00000533482 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
RAD50-209ENST00000533482 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
RAD50-209ENST00000533482 SPRR2GQ9BYE4 73 aa5.02□□□□□ -1.61
RAD50-209ENST00000533482 HERC1Q15751 4861 aa4.96□□□□□ -1.62
RAD50-209ENST00000533482 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
RAD50-209ENST00000533482 PKHD1L1Q86WI1 4243 aa4.94□□□□□ -1.62
RAD50-209ENST00000533482 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
RAD50-209ENST00000533482 RNF213Q63HN8 5207 aa4.93□□□□□ -1.62
RAD50-209ENST00000533482 MUC2Q02817 5179 aa4.92□□□□□ -1.62
RAD50-209ENST00000533482 TNXBP22105 4242 aa4.91□□□□□ -1.62
RAD50-209ENST00000533482 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
RAD50-209ENST00000533482 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
RAD50-209ENST00000533482 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
RAD50-209ENST00000533482 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
RAD50-209ENST00000533482 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
RAD50-209ENST00000533482 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
RAD50-209ENST00000533482 INE1O15225 51 aa4.76□□□□□ -1.65
RAD50-209ENST00000533482 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
RAD50-209ENST00000533482 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
RAD50-209ENST00000533482 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
RAD50-209ENST00000533482 MT1BP07438 61 aa4.71□□□□□ -1.66
RAD50-209ENST00000533482 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
RAD50-209ENST00000533482 MT1XP80297 61 aa4.69□□□□□ -1.66
RAD50-209ENST00000533482 KRTAP10-5P60370 271 aa4.65□□□□□ -1.66
RAD50-209ENST00000533482 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
RAD50-209ENST00000533482 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
RAD50-209ENST00000533482 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
RAD50-209ENST00000533482 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
RAD50-209ENST00000533482 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
RAD50-209ENST00000533482 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
RAD50-209ENST00000533482 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
RAD50-209ENST00000533482 LCE2BO14633 110 aa4.53□□□□□ -1.68
RAD50-209ENST00000533482 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
RAD50-209ENST00000533482 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
RAD50-209ENST00000533482 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
RAD50-209ENST00000533482 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
RAD50-209ENST00000533482 USH2AO75445 5202 aa4.33□□□□□ -1.72
RAD50-209ENST00000533482 MT1GP13640 62 aa4.32□□□□□ -1.72
RAD50-209ENST00000533482 LCE2AQ5TA79 106 aaPredicted RBP4.27□□□□□ -1.73
RAD50-209ENST00000533482 SPRR2EP22531 72 aa4.23□□□□□ -1.73
RAD50-209ENST00000533482 SPRR2BP35325 72 aa4.23□□□□□ -1.73
RAD50-209ENST00000533482 SPRR2AP35326 72 aa4.23□□□□□ -1.73
RAD50-209ENST00000533482 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
RAD50-209ENST00000533482 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms